RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	RPS14A	P06367	137 aa	Known RBP	5.25	□□□□□ -1.57
CMR1	YDL156W	MCK1	P21965	375 aa	Known RBP	5.25	□□□□□ -1.57
CMR1	YDL156W	ARN2	P38724	620 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	SPL2	P38839	148 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	RPS14B	P39516	138 aa	Known RBP	5.25	□□□□□ -1.57
CMR1	YDL156W	HSK3	P69852	69 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	YDR476C	Q03362	224 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	HPT1	Q04178	221 aa	Known RBP	5.25	□□□□□ -1.57
CMR1	YDL156W	YOR186W	Q08560	144 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	FDH1	Q08911	376 aa		5.25	□□□□□ -1.57
CMR1	YDL156W	FCY2	P17064	533 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	MDM10	P18409	493 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	ALB1	P47019	175 aa	Predicted RBP	5.24	□□□□□ -1.57
CMR1	YDL156W	LSM7	P53905	115 aa	Known RBP	5.24	□□□□□ -1.57
CMR1	YDL156W	CRZ1	P53968	678 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	PET191	Q02772	108 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	MRX11	Q03079	207 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	YDR415C	Q04033	374 aa	Predicted RBP	5.24	□□□□□ -1.57
CMR1	YDL156W	SYC1	Q08553	188 aa	Predicted RBP	5.24	□□□□□ -1.57
CMR1	YDL156W	YLR046C	Q12253	270 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	YPL229W	Q99395	206 aa		5.24	□□□□□ -1.57
CMR1	YDL156W	MDS3	P53094	1487 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	MYO2	P19524	1574 aa	Known RBP	5.23	□□□□□ -1.57
CMR1	YDL156W	SCO1	P23833	295 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	SUA7	P29055	345 aa	Predicted RBP	5.23	□□□□□ -1.57
CMR1	YDL156W	NAT2	P37293	288 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	EFM1	P38732	585 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	LSM12	P38828	187 aa	Known RBP	5.23	□□□□□ -1.57
CMR1	YDL156W	CFD1	P40558	293 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	SCS3	P53012	380 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	RAV2	Q03956	351 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	SUE1	Q06524	206 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	MIM1	Q08176	113 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	YOR292C	Q08743	309 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	RRG7	Q08774	242 aa	Predicted RBP	5.23	□□□□□ -1.57
CMR1	YDL156W	ATP16	Q12165	160 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	TRM10	Q12400	293 aa		5.23	□□□□□ -1.57
CMR1	YDL156W	PEP1	P32319	1579 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	YLR419W	Q06698	1435 aa	Known RBP	5.22	□□□□□ -1.57
CMR1	YDL156W	SNF4	P12904	322 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	AHC2	P25649	128 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	CDC50	P25656	391 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	LDS1	P31379	325 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	SCO2	P38072	301 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	PRS3	P38689	320 aa	Known RBP	5.22	□□□□□ -1.57
CMR1	YDL156W	YIL067C	P40514	678 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	HAC1	P41546	238 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	COQ5	P49017	307 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	PRM8	P53174	237 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	YGL034C	P53186	121 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	FSH2	Q05015	223 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	PSK1	P31374	1356 aa		5.22	□□□□□ -1.57
CMR1	YDL156W	ATR1	P13090	542 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	SOL2	P37262	315 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	TRM7	P38238	310 aa	Known RBP	5.21	□□□□□ -1.57
CMR1	YDL156W	DOG2	P38773	246 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	DOG1	P38774	246 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	UBP5	P39944	805 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	SNO3	P43544	222 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	FLC3	P53121	802 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	AAH1	P53909	347 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	GOT1	Q03554	138 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	YDR124W	Q04608	324 aa		5.21	□□□□□ -1.57
CMR1	YDL156W	SMC4	Q12267	1418 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	PAN1	P32521	1480 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	HHF1	P02309	103 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	PBI2	P0CT04	75 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	YCR090C	P25654	182 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	ERG24	P32462	438 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	PEX2	P32800	271 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	AVT7	P40501	490 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	SDS23	P53172	527 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	HST4	P53688	370 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	FMP41	P53889	259 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	UBC7	Q02159	165 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	YML108W	Q03759	105 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	YMR254C	Q04838	102 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	YMR317W	Q04893	1140 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	YHC1	Q05900	231 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	SHH4	Q06236	168 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	FRQ1	Q06389	190 aa		5.21	□□□□□ -1.58
CMR1	YDL156W	PST2	Q12335	198 aa	Known RBP	5.21	□□□□□ -1.58
CMR1	YDL156W	STU1	P38198	1513 aa		5.2	□□□□□ -1.58
CMR1	YDL156W	RPL25	P04456	142 aa	Known RBP	5.2	□□□□□ -1.58
CMR1	YDL156W	MRPS28	P21771	286 aa		5.2	□□□□□ -1.58
CMR1	YDL156W	HSP30	P25619	332 aa		5.2	□□□□□ -1.58
CMR1	YDL156W	RPS1A	P33442	255 aa	Known RBP	5.2	□□□□□ -1.58
CMR1	YDL156W	UTP11	P34247	250 aa	Predicted RBP	5.2	□□□□□ -1.58
CMR1	YDL156W	PMU1	P36069	295 aa		5.2	□□□□□ -1.58
CMR1	YDL156W	FRM2	P37261	193 aa		5.2	□□□□□ -1.58
CMR1	YDL156W	DIM1	P41819	318 aa	Known RBP	5.2	□□□□□ -1.58
CMR1	YDL156W	THP3	Q12049	470 aa	Known RBP	5.2	□□□□□ -1.58
CMR1	YDL156W	MMS1	Q06211	1407 aa		5.19	□□□□□ -1.58
CMR1	YDL156W	PDR10	P51533	1564 aa		5.19	□□□□□ -1.58
CMR1	YDL156W	CYC3	P06182	269 aa		5.19	□□□□□ -1.58
CMR1	YDL156W	RPL42A	P0CX27	106 aa	Known RBP	5.19	□□□□□ -1.58
CMR1	YDL156W	RPL42B	P0CX28	106 aa	Known RBP	5.19	□□□□□ -1.58
CMR1	YDL156W	RNA14	P25298	677 aa	Known RBP	5.19	□□□□□ -1.58
CMR1	YDL156W	CSG2	P35206	410 aa		5.19	□□□□□ -1.58
CMR1	YDL156W	ILM1	P47155	203 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms