RNA–Protein interactions for RNA: YAR029W

YAR029W, Transcript of Member of DUP240 gene family but contains no transmembrane domains, yeast

Gene YAR029W, Length 225 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR029W	YAR029W	GCD14	P46959	383 aa	Predicted RBP	0.3	□□□□□ -2.36
YAR029W	YAR029W	MRX5	P47007	382 aa		0.3	□□□□□ -2.36
YAR029W	YAR029W	RMR1	P53060	241 aa		0.3	□□□□□ -2.36
YAR029W	YAR029W	PNC1	P53184	216 aa	Known RBP	0.3	□□□□□ -2.36
YAR029W	YAR029W	AIM36	Q03798	255 aa		0.3	□□□□□ -2.36
YAR029W	YAR029W	YPR172W	Q06608	200 aa		0.3	□□□□□ -2.36
YAR029W	YAR029W	YPL119C-A	Q3E751	87 aa		0.3	□□□□□ -2.36
YAR029W	YAR029W	AQY2	P0CD90	149 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	TRX1	P22217	103 aa	Known RBP	0.29	□□□□□ -2.36
YAR029W	YAR029W	MEI4	P29467	408 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	TIR3	P40552	269 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	RPL33B	P41056	107 aa	Known RBP	0.29	□□□□□ -2.36
YAR029W	YAR029W	YJR012C	P47087	207 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	GOT1	Q03554	138 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	YMR007W	Q03675	126 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	COQ10	Q08058	207 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	YPL162C	Q12042	273 aa		0.29	□□□□□ -2.36
YAR029W	YAR029W	SSA3	P09435	649 aa	Known RBP	0.28	□□□□□ -2.36
YAR029W	YAR029W	NSP1	P14907	823 aa	Known RBP	0.28	□□□□□ -2.36
YAR029W	YAR029W	MET16	P18408	261 aa	Predicted RBP	0.28	□□□□□ -2.36
YAR029W	YAR029W	VPS3	P23643	1011 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	QRI5	P32344	111 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	FZF1	P32805	299 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YPT52	P36018	234 aa	Known RBP	0.28	□□□□□ -2.36
YAR029W	YAR029W	DDI1	P40087	428 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YJR056C	P47115	236 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	ATG39	Q06159	398 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	ATG17	Q06410	417 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YPR147C	Q06522	304 aa	Known RBP	0.28	□□□□□ -2.36
YAR029W	YAR029W	YOR186W	Q08560	144 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YPL257W	Q08974	193 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YCT1	Q12235	531 aa		0.28	□□□□□ -2.36
YAR029W	YAR029W	YKR104W	P0CE69	306 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	RSR1	P13856	272 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	SNZ3	P43545	298 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	RPA43	P46669	326 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	BOL2	P53082	120 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	GMC2	Q06201	188 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	REX3	Q12090	404 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	FMP16	Q12497	93 aa		0.27	□□□□□ -2.37
YAR029W	YAR029W	RPL27B	P0C2H7	136 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	BLI1	P35727	113 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	VPS21	P36017	210 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	JEN1	P36035	616 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	ECM33	P38248	429 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	RPF1	P38805	295 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	RIO2	P40160	425 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	COA1	P40452	197 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	RSM25	P40496	264 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	ANT1	Q06497	328 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	MSB2	P32334	1306 aa		0.26	□□□□□ -2.37
YAR029W	YAR029W	SLH1	P53327	1967 aa	Known RBP	0.26	□□□□□ -2.37
YAR029W	YAR029W	HIS1	P00498	297 aa	Known RBP	0.25	□□□□□ -2.37
YAR029W	YAR029W	PBN1	P25580	416 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	YKL070W	P36087	169 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	RRF1	P38771	230 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	BIG1	P38813	335 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	GAA1	P39012	614 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	YNL217W	P40152	326 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	YNL046W	P53956	172 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	MDY2	Q12285	212 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	HTL1	Q9URQ5	78 aa		0.25	□□□□□ -2.37
YAR029W	YAR029W	GOS1	P38736	223 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	SMB1	P40018	196 aa	Known RBP	0.24	□□□□□ -2.37
YAR029W	YAR029W	YRB2	P40517	327 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	KAP114	P53067	1004 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	SPG4	Q04438	115 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	RRP40	Q08285	240 aa	Known RBP	0.24	□□□□□ -2.37
YAR029W	YAR029W	MSA1	Q08471	629 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	NIP7	Q08962	181 aa	Known RBP	0.24	□□□□□ -2.37
YAR029W	YAR029W	MSH5	Q12175	901 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	YNL146C-A	Q3E7Z1	64 aa		0.24	□□□□□ -2.37
YAR029W	YAR029W	CDC8	P00572	216 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	MRPL39	P36533	70 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	YBR096W	P38256	230 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	PRS2	P38620	318 aa	Known RBP	0.23	□□□□□ -2.37
YAR029W	YAR029W	YAR068W	P39564	161 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	PGD1	P40356	397 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	GPI8	P49018	411 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	SNZ2	P53824	298 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	CUS2	P53830	285 aa	Predicted RBP	0.23	□□□□□ -2.37
YAR029W	YAR029W	OST6	Q03723	332 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	YOR020W-A	Q3E824	90 aa		0.23	□□□□□ -2.37
YAR029W	YAR029W	IPP1	P00817	287 aa	Known RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	KRR1	P25586	316 aa	Predicted RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	HOM6	P31116	359 aa	Known RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	TVP38	P36164	337 aa		0.22	□□□□□ -2.37
YAR029W	YAR029W	HAM1	P47119	197 aa	Known RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	DOC1	P53068	250 aa		0.22	□□□□□ -2.37
YAR029W	YAR029W	MPP6	P53725	186 aa	Predicted RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	POP3	P53833	195 aa	Predicted RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	SPG3	Q04398	127 aa	Predicted RBP	0.22	□□□□□ -2.37
YAR029W	YAR029W	COX2	P00410	251 aa		0.21	□□□□□ -2.38
YAR029W	YAR029W	FCY2	P17064	533 aa		0.21	□□□□□ -2.38
YAR029W	YAR029W	ERD2	P18414	219 aa		0.21	□□□□□ -2.38
YAR029W	YAR029W	DBP3	P20447	523 aa	Known RBP	0.21	□□□□□ -2.38
YAR029W	YAR029W	RPS5	P26783	225 aa	Known RBP	0.21	□□□□□ -2.38
YAR029W	YAR029W	MRPL40	P36534	297 aa		0.21	□□□□□ -2.38
YAR029W	YAR029W	YBR063C	P38083	404 aa		0.21	□□□□□ -2.38
YAR029W	YAR029W	SOK1	P40317	901 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms