RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 GZF3P42944 551 aaKnown RBP12.35□□□□□ -0.43
SCR1SCR1 YDR179W-AQ03983 463 aa12.35□□□□□ -0.43
SCR1SCR1 VMA3P25515 160 aa12.34□□□□□ -0.43
SCR1SCR1 RFA3P26755 122 aaKnown RBP12.34□□□□□ -0.43
SCR1SCR1 IMP1P28627 190 aa12.34□□□□□ -0.43
SCR1SCR1 MGR3Q04472 501 aa12.34□□□□□ -0.43
SCR1SCR1 WHI5Q12416 295 aa12.34□□□□□ -0.43
SCR1SCR1 FUR4P05316 633 aaKnown RBP12.33□□□□□ -0.44
SCR1SCR1 YKL063CP35725 167 aa12.33□□□□□ -0.44
SCR1SCR1 PRS2P38620 318 aaKnown RBP12.33□□□□□ -0.44
SCR1SCR1 ATG18P43601 500 aa12.33□□□□□ -0.44
SCR1SCR1 CAC2Q04199 468 aa12.33□□□□□ -0.44
SCR1SCR1 ECM18Q04623 453 aa12.33□□□□□ -0.44
SCR1SCR1 RIM9Q04734 239 aa12.33□□□□□ -0.44
SCR1SCR1 YMR105W-AQ8TGS8 64 aa12.33□□□□□ -0.44
SCR1SCR1 RPS18AP0CX55 146 aaKnown RBP12.32□□□□□ -0.44
SCR1SCR1 RPS18BP0CX56 146 aaPredicted RBP12.32□□□□□ -0.44
SCR1SCR1 SKP1P52286 194 aa12.32□□□□□ -0.44
SCR1SCR1 SUT1P53032 299 aaKnown RBP12.32□□□□□ -0.44
SCR1SCR1 HNT1Q04344 158 aaKnown RBP12.32□□□□□ -0.44
SCR1SCR1 MPD1Q12404 318 aaKnown RBP12.32□□□□□ -0.44
SCR1SCR1 REP2P03872 296 aa12.31□□□□□ -0.44
SCR1SCR1 PET122P10355 254 aa12.31□□□□□ -0.44
SCR1SCR1 PEX4P29340 183 aa12.31□□□□□ -0.44
SCR1SCR1 YBL010CP32788 280 aa12.31□□□□□ -0.44
SCR1SCR1 JLP2P40206 208 aa12.31□□□□□ -0.44
SCR1SCR1 MID1P41821 548 aa12.31□□□□□ -0.44
SCR1SCR1 GPI14P47088 403 aaKnown RBP12.31□□□□□ -0.44
SCR1SCR1 SUS1Q6WNK7 96 aa12.31□□□□□ -0.44
SCR1SCR1 CDC34P14682 295 aa12.3□□□□□ -0.44
SCR1SCR1 ARO4P32449 370 aaKnown RBP12.3□□□□□ -0.44
SCR1SCR1 GPX2P38143 162 aa12.3□□□□□ -0.44
SCR1SCR1 BXI1P48558 297 aa12.3□□□□□ -0.44
SCR1SCR1 UTP15Q04305 513 aaKnown RBP12.3□□□□□ -0.44
SCR1SCR1 ATG40Q99325 256 aa12.3□□□□□ -0.44
SCR1SCR1 GDH1P07262 454 aaKnown RBP12.29□□□□□ -0.44
SCR1SCR1 AIM46P38885 310 aa12.29□□□□□ -0.44
SCR1SCR1 CCS1P40202 249 aaKnown RBP12.29□□□□□ -0.44
SCR1SCR1 PIR5P46999 287 aa12.29□□□□□ -0.44
SCR1SCR1 OKP1P53298 406 aa12.29□□□□□ -0.44
SCR1SCR1 YMR317WQ04893 1140 aa12.29□□□□□ -0.44
SCR1SCR1 ARR2Q06597 130 aa12.29□□□□□ -0.44
SCR1SCR1 RPS31P05759 152 aaKnown RBP12.28□□□□□ -0.44
SCR1SCR1 SRL4Q03085 281 aa12.28□□□□□ -0.44
SCR1SCR1 ATG41Q12048 136 aa12.28□□□□□ -0.44
SCR1SCR1 SWD2P36104 329 aaPredicted RBP12.27□□□□□ -0.45
SCR1SCR1 AIR1P40507 360 aaKnown RBP12.27□□□□□ -0.45
SCR1SCR1 YOR029WQ12243 111 aa12.27□□□□□ -0.45
SCR1SCR1 ATP10P18496 279 aa12.26□□□□□ -0.45
SCR1SCR1 HOM6P31116 359 aaKnown RBP12.26□□□□□ -0.45
SCR1SCR1 ACH1P32316 526 aa12.26□□□□□ -0.45
SCR1SCR1 SEC66P33754 206 aa12.26□□□□□ -0.45
SCR1SCR1 SOR1P35497 357 aaKnown RBP12.26□□□□□ -0.45
SCR1SCR1 PAC2P39937 518 aa12.26□□□□□ -0.45
SCR1SCR1 VHT1P53241 593 aa12.26□□□□□ -0.45
SCR1SCR1 CPR8P53728 308 aa12.26□□□□□ -0.45
SCR1SCR1 SOR2Q07786 357 aa12.26□□□□□ -0.45
SCR1SCR1 AIR2Q12476 344 aaKnown RBP12.26□□□□□ -0.45
SCR1SCR1 CHO1P08456 276 aa12.25□□□□□ -0.45
SCR1SCR1 YGL114WP53134 725 aa12.25□□□□□ -0.45
SCR1SCR1 BUD25P85052 153 aa12.25□□□□□ -0.45
SCR1SCR1 ADH6Q04894 360 aaKnown RBP12.25□□□□□ -0.45
SCR1SCR1 MRPL35Q06678 367 aa12.25□□□□□ -0.45
SCR1SCR1 MSH5Q12175 901 aa12.25□□□□□ -0.45
SCR1SCR1 RFM1Q12192 310 aa12.25□□□□□ -0.45
SCR1SCR1 ODC2Q99297 307 aa12.25□□□□□ -0.45
SCR1SCR1 VMA5P31412 392 aaKnown RBP12.24□□□□□ -0.45
SCR1SCR1 MTC7P32633 139 aa12.24□□□□□ -0.45
SCR1SCR1 VAM7P32912 316 aa12.24□□□□□ -0.45
SCR1SCR1 BNA1P47096 177 aa12.24□□□□□ -0.45
SCR1SCR1 HNT2P49775 206 aa12.24□□□□□ -0.45
SCR1SCR1 WSC2P53832 503 aa12.24□□□□□ -0.45
SCR1SCR1 DUG3P53871 357 aa12.24□□□□□ -0.45
SCR1SCR1 VAM3Q12241 283 aa12.24□□□□□ -0.45
SCR1SCR1 URA6P15700 204 aa12.23□□□□□ -0.45
SCR1SCR1 GWT1P47026 490 aa12.23□□□□□ -0.45
SCR1SCR1 TTI2P47168 421 aa12.23□□□□□ -0.45
SCR1SCR1 PRE4P30657 266 aa12.22□□□□□ -0.45
SCR1SCR1 ERG3P32353 365 aa12.22□□□□□ -0.45
SCR1SCR1 MSS1P32559 526 aaPredicted RBP12.22□□□□□ -0.45
SCR1SCR1 MBA1P38300 278 aa12.22□□□□□ -0.45
SCR1SCR1 NTC20P38302 140 aaPredicted RBP12.22□□□□□ -0.45
SCR1SCR1 FMP42Q04991 504 aa12.22□□□□□ -0.45
SCR1SCR1 BBP1Q12365 385 aa12.22□□□□□ -0.45
SCR1SCR1 IFM1P25038 676 aa12.21□□□□□ -0.45
SCR1SCR1 CPR5P35176 225 aa12.21□□□□□ -0.45
SCR1SCR1 HSK3P69852 69 aa12.21□□□□□ -0.45
SCR1SCR1 RPL21AQ02753 160 aaKnown RBP12.21□□□□□ -0.45
SCR1SCR1 MCM21Q06675 368 aa12.21□□□□□ -0.45
SCR1SCR1 RPL21BQ12672 160 aaKnown RBP12.21□□□□□ -0.45
SCR1SCR1 TAL1P15019 335 aaKnown RBP12.2□□□□□ -0.46
SCR1SCR1 ATG22P25568 528 aa12.2□□□□□ -0.46
SCR1SCR1 PIC2P40035 300 aa12.2□□□□□ -0.46
SCR1SCR1 YPL108WQ02872 168 aaPredicted RBP12.2□□□□□ -0.46
SCR1SCR1 DCP1Q12517 231 aaPredicted RBP12.2□□□□□ -0.46
SCR1SCR1 RIB7P33312 244 aa12.19□□□□□ -0.46
SCR1SCR1 YIL060WP40519 144 aa12.19□□□□□ -0.46
SCR1SCR1 YGR054WP53235 642 aaKnown RBP12.19□□□□□ -0.46
SCR1SCR1 APJ1P53940 528 aa12.19□□□□□ -0.46
SCR1SCR1 RGC1Q06108 1083 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms