RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 SGSM3Q96HU1 749 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 RMDN3Q96TC7 470 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 PDCD2LQ9BRP1 358 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 NTPCRQ9BSD7 190 aaKnown RBP18.82■□□□□ 0.6
CTSB-232ENST00000534510 PXMP2Q9NR77 195 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 AAASQ9NRG9 546 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
CTSB-232ENST00000534510 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
CTSB-232ENST00000534510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
CTSB-232ENST00000534510 ATP2C2O75185 946 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 GAS8O95995 478 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 GSTA1P08263 222 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 VIMP08670 466 aaKnown RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 UNGP13051 313 aaPredicted RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 GARTP22102 1010 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 FUKQ8N0W3 1084 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 LARGE2Q8N3Y3 721 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 DDX23Q9BUQ8 820 aaKnown RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 MOV10L1Q9BXT6 1211 aaKnown RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 YY1AP1Q9H869 796 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 CTDP1Q9Y5B0 961 aaPredicted RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 MROH7Q68CQ1 1323 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 TESPA1A2RU30 521 aaPredicted RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 SCP2P22307 547 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 CCDC91Q7Z6B0 441 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 EXOC3L1Q86VI1 746 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 IPO4Q8TEX9 1081 aaKnown RBP18.81■□□□□ 0.6
CTSB-232ENST00000534510 SENP7Q9BQF6 1050 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 DCLK3Q9C098 648 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 KIAA1683Q9H0B3 1180 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 CHST7Q9NS84 486 aa18.81■□□□□ 0.6
CTSB-232ENST00000534510 TP73O15350 636 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 ACSL3O95573 720 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 ATF2P15336 505 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 IFNAR2P48551 515 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 CENPCQ03188 943 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 SNCBQ16143 134 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 LONRF1Q17RB8 773 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 CCDC38Q502W7 563 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 ARHGEF16Q5VV41 709 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 XRRA1Q6P2D8 792 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 NLRX1Q86UT6 975 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 PARP9Q8IXQ6 854 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 CEP170P1Q96L14 293 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 ELAC2Q9BQ52 826 aaKnown RBP18.8■□□□□ 0.6
CTSB-232ENST00000534510 PI4K2AQ9BTU6 479 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 PCDHA10Q9Y5I2 948 aa18.8■□□□□ 0.6
CTSB-232ENST00000534510 HNRNPDLO14979 420 aaKnown RBP18.79■□□□□ 0.6
CTSB-232ENST00000534510 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.64e-14■■■■■ 34
CTSB-232ENST00000534510 CHKAP35790 457 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 BPIFB4P59827 614 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 PTP4A2Q12974 167 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 LLGL1Q15334 1064 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
CTSB-232ENST00000534510 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 ELMO3Q96BJ8 720 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 BICD1Q96G01 975 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 PCDHB2Q9Y5E7 798 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 MYPNQ86TC9 1320 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 COL4A5P29400 1685 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 SORBS3O60504 671 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 TTC4O95801 387 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 RRM1P23921 792 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 IVDP26440 423 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 RDXP35241 583 aaKnown RBP18.79■□□□□ 0.6
CTSB-232ENST00000534510 ITGA8P53708 1063 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 C15orf39Q6ZRI6 1047 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 MCPH1Q8NEM0 835 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 DYDC1Q8WWB3 177 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 ATG4AQ8WYN0 398 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 ARHGEF2Q92974 986 aaKnown RBP18.79■□□□□ 0.6
CTSB-232ENST00000534510 ATP6V0A1Q93050 837 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
CTSB-232ENST00000534510 FAM213AQ9BRX8 229 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 TRAIPQ9BWF2 469 aa18.79■□□□□ 0.6
CTSB-232ENST00000534510 FER1L6Q2WGJ9 1857 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 ZBED4O75132 1171 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 CALCAP01258 141 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 CCND2P30279 289 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 NSFP46459 744 aaKnown RBP18.78■□□□□ 0.6
CTSB-232ENST00000534510 RTP1P59025 263 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
CTSB-232ENST00000534510 AGBL3Q8NEM8 1001 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 ATL2Q8NHH9 583 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 GPRASP2Q96D09 838 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 TRIM7Q9C029 511 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 CD248Q9HCU0 757 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 GABBR1Q9UBS5 961 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 ANAPC5Q9UJX4 755 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 SLC12A4Q9UP95 1085 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 ADGRA3Q8IWK6 1321 aa18.78■□□□□ 0.6
CTSB-232ENST00000534510 H0YCG3 227 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 PROSCO94903 275 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 ABCD1P33897 745 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 LIN9Q5TKA1 542 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 BBOF1Q8ND07 529 aa18.77■□□□□ 0.6
CTSB-232ENST00000534510 CPA5Q8WXQ8 436 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms