RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 JEM1P40358 645 aa-0.42□□□□□ -2.48
snR55snR55 JHD2P47156 728 aaPredicted RBP-0.42□□□□□ -2.48
snR55snR55 RPL4BP49626 362 aaKnown RBP-0.42□□□□□ -2.48
snR55snR55 NBP35P52920 328 aa-0.42□□□□□ -2.48
snR55snR55 YGL034CP53186 121 aa-0.42□□□□□ -2.48
snR55snR55 PDR16P53860 351 aaKnown RBP-0.42□□□□□ -2.48
snR55snR55 ARP5P53946 755 aa-0.42□□□□□ -2.48
snR55snR55 ARR2Q06597 130 aa-0.42□□□□□ -2.48
snR55snR55 MSA1Q08471 629 aa-0.42□□□□□ -2.48
snR55snR55 POM33Q12164 279 aa-0.42□□□□□ -2.48
snR55snR55 YOS9Q99220 542 aa-0.42□□□□□ -2.48
snR55snR55 RPL9AP05738 191 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 GRX2P17695 143 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 RPL5P26321 297 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 VMA11P32842 164 aa-0.44□□□□□ -2.48
snR55snR55 TMA19P35691 167 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 LAS1P36146 502 aaPredicted RBP-0.44□□□□□ -2.48
snR55snR55 HEK2P38199 381 aaKnown RBP RIP-Chip data-0.44□□□□□ -2.48not detected
snR55snR55 SOK1P40317 901 aa-0.44□□□□□ -2.48
snR55snR55 AIM20P40451 204 aa-0.44□□□□□ -2.48
snR55snR55 RPL9BP51401 191 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 SWS2P53937 143 aa-0.44□□□□□ -2.48
snR55snR55 YLR179CQ06252 201 aaKnown RBP-0.44□□□□□ -2.48
snR55snR55 LCL2Q08045 131 aa-0.44□□□□□ -2.48
snR55snR55 SIA1Q12212 622 aa-0.44□□□□□ -2.48
snR55snR55 MSW1P04803 379 aa-0.45□□□□□ -2.48
snR55snR55 RPP0P05317 312 aaKnown RBP-0.45□□□□□ -2.48
snR55snR55 BIG1P38813 335 aa-0.45□□□□□ -2.48
snR55snR55 CDC40P40968 455 aaPredicted RBP-0.45□□□□□ -2.48
snR55snR55 MRPL23Q12487 163 aaPredicted RBP-0.45□□□□□ -2.48
snR55snR55 YNL146C-AQ3E7Z1 64 aa-0.45□□□□□ -2.48
snR55snR55 ACC1Q00955 2233 aaKnown RBP-0.46□□□□□ -2.48
snR55snR55 CAR2P07991 424 aaKnown RBP-0.46□□□□□ -2.48
snR55snR55 YHR212W-AP0CX91 67 aa-0.46□□□□□ -2.48
snR55snR55 FZF1P32805 299 aa-0.46□□□□□ -2.48
snR55snR55 TIM21P53220 239 aa-0.46□□□□□ -2.48
snR55snR55 CDC14Q00684 551 aa-0.46□□□□□ -2.48
snR55snR55 PSY3Q12318 242 aa-0.46□□□□□ -2.48
snR55snR55 YBL008W-AQ3E821 79 aa-0.46□□□□□ -2.48
snR55snR55 MSA2P36157 363 aa-0.47□□□□□ -2.48
snR55snR55 AGP3P43548 558 aa-0.47□□□□□ -2.48
snR55snR55 BOL2P53082 120 aa-0.47□□□□□ -2.48
snR55snR55 SFH1Q06168 426 aa-0.47□□□□□ -2.48
snR55snR55 HEM25Q07534 307 aa-0.47□□□□□ -2.48
snR55snR55 YOL160WQ08321 113 aa-0.47□□□□□ -2.48
snR55snR55 ILV1P00927 576 aaKnown RBP-0.48□□□□□ -2.49
snR55snR55 RIB4P50861 169 aaPredicted RBP-0.48□□□□□ -2.49
snR55snR55 SWI1P09547 1314 aa-0.48□□□□□ -2.49
snR55snR55 YLR462WO13556 202 aa-0.49□□□□□ -2.49
snR55snR55 ICL1P28240 557 aaPredicted RBP-0.49□□□□□ -2.49
snR55snR55 YEL075CP39972 122 aa-0.49□□□□□ -2.49
snR55snR55 TIR3P40552 269 aa-0.49□□□□□ -2.49
snR55snR55 RPL33BP41056 107 aaKnown RBP-0.49□□□□□ -2.49
snR55snR55 VBA1Q04301 562 aa-0.49□□□□□ -2.49
snR55snR55 YLR030WQ07967 263 aa-0.49□□□□□ -2.49
snR55snR55 SRY1P36007 326 aa-0.5□□□□□ -2.49
snR55snR55 YER189WP40104 122 aa-0.5□□□□□ -2.49
snR55snR55 NAS2P40555 220 aa-0.5□□□□□ -2.49
snR55snR55 SPP2Q02521 185 aa-0.5□□□□□ -2.49
snR55snR55 ANT1Q06497 328 aa-0.5□□□□□ -2.49
snR55snR55 RRS1Q08746 203 aaKnown RBP-0.5□□□□□ -2.49
snR55snR55 CDC37P06101 506 aaKnown RBP-0.51□□□□□ -2.49
snR55snR55 MNN9P39107 395 aaKnown RBP-0.51□□□□□ -2.49
snR55snR55 YGL159WP53110 370 aa-0.51□□□□□ -2.49
snR55snR55 CPD1P53314 239 aa-0.51□□□□□ -2.49
snR55snR55 FAR8Q05040 523 aa-0.51□□□□□ -2.49
snR55snR55 GPN3Q06543 272 aa-0.51□□□□□ -2.49
snR55snR55 POF1P25576 258 aa-0.52□□□□□ -2.49
snR55snR55 MEI4P29467 408 aa-0.52□□□□□ -2.49
snR55snR55 ERG24P32462 438 aaKnown RBP-0.52□□□□□ -2.49
snR55snR55 TVP38P36164 337 aa-0.52□□□□□ -2.49
snR55snR55 APE4P38821 490 aa-0.52□□□□□ -2.49
snR55snR55 GAA1P39012 614 aa-0.52□□□□□ -2.49
snR55snR55 END3P39013 349 aa-0.52□□□□□ -2.49
snR55snR55 YFL065CP43539 102 aa-0.52□□□□□ -2.49
snR55snR55 ARV1Q06541 321 aa-0.52□□□□□ -2.49
snR55snR55 BER1Q06688 274 aaKnown RBP-0.52□□□□□ -2.49
snR55snR55 RPL27BP0C2H7 136 aaKnown RBP-0.53□□□□□ -2.49
snR55snR55 SNA3P14359 133 aa-0.53□□□□□ -2.49
snR55snR55 GPI12P23797 304 aa-0.53□□□□□ -2.49
snR55snR55 TDA11P38854 504 aa-0.53□□□□□ -2.49
snR55snR55 LOH1P47055 219 aa-0.53□□□□□ -2.49
snR55snR55 GTR2P53290 341 aa-0.53□□□□□ -2.49
snR55snR55 TPO4Q12256 659 aa-0.53□□□□□ -2.49
snR55snR55 STH1P32597 1359 aa-0.54□□□□□ -2.5
snR55snR55 YNL217WP40152 326 aa-0.54□□□□□ -2.5
snR55snR55 YLR297WQ05899 129 aa-0.54□□□□□ -2.5
snR55snR55 SSA3P09435 649 aaKnown RBP-0.55□□□□□ -2.5
snR55snR55 PET18P25362 215 aa-0.55□□□□□ -2.5
snR55snR55 HIS2P38635 335 aa-0.55□□□□□ -2.5
snR55snR55 YRB2P40517 327 aa-0.55□□□□□ -2.5
snR55snR55 MPP6P53725 186 aaPredicted RBP-0.55□□□□□ -2.5
snR55snR55 MNT4P53745 580 aa-0.55□□□□□ -2.5
snR55snR55 SED1Q01589 338 aa-0.55□□□□□ -2.5
snR55snR55 PER33Q12144 273 aa-0.55□□□□□ -2.5
snR55snR55 MSH5Q12175 901 aa-0.55□□□□□ -2.5
snR55snR55 SMI1P32566 505 aa-0.56□□□□□ -2.5
snR55snR55 UGX2P32772 223 aa-0.56□□□□□ -2.5
snR55snR55 VPS21P36017 210 aaKnown RBP-0.56□□□□□ -2.5
snR55snR55 FZO1P38297 855 aa-0.56□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 86 ms