RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W MRH4P53166 561 aa1.05□□□□□ -2.24
YOP1YPR028W SLM2P53955 656 aa1.05□□□□□ -2.24
YOP1YPR028W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
YOP1YPR028W PEX12Q04370 399 aa1.05□□□□□ -2.24
YOP1YPR028W YPR098CQ06089 161 aa1.05□□□□□ -2.24
YOP1YPR028W YPR147CQ06522 304 aaKnown RBP1.05□□□□□ -2.24
YOP1YPR028W SDO1Q07953 250 aaKnown RBP1.05□□□□□ -2.24
YOP1YPR028W CSM4Q08955 156 aa1.05□□□□□ -2.24
YOP1YPR028W YOL107WQ12239 342 aa1.05□□□□□ -2.24
YOP1YPR028W SAS5Q99314 248 aa1.05□□□□□ -2.24
YOP1YPR028W YKR104WP0CE69 306 aa1.04□□□□□ -2.24
YOP1YPR028W SCO1P23833 295 aa1.04□□□□□ -2.24
YOP1YPR028W SCM4P32564 187 aa1.04□□□□□ -2.24
YOP1YPR028W SGE1P33335 543 aa1.04□□□□□ -2.24
YOP1YPR028W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
YOP1YPR028W RCN1P36054 211 aa1.04□□□□□ -2.24
YOP1YPR028W MRPL39P36533 70 aa1.04□□□□□ -2.24
YOP1YPR028W YHB1P39676 399 aaKnown RBP1.04□□□□□ -2.24
YOP1YPR028W THO1P40040 218 aaKnown RBP1.04□□□□□ -2.24
YOP1YPR028W YER189WP40104 122 aa1.04□□□□□ -2.24
YOP1YPR028W SNZ3P43545 298 aa1.04□□□□□ -2.24
YOP1YPR028W OST2P46964 130 aa1.04□□□□□ -2.24
YOP1YPR028W USE1P53146 245 aa1.04□□□□□ -2.24
YOP1YPR028W CAB4P53332 305 aa1.04□□□□□ -2.24
YOP1YPR028W COS6P53344 381 aa1.04□□□□□ -2.24
YOP1YPR028W MRPL50P53724 139 aa1.04□□□□□ -2.24
YOP1YPR028W GOT1Q03554 138 aa1.04□□□□□ -2.24
YOP1YPR028W CGI121Q03705 181 aaKnown RBP1.04□□□□□ -2.24
YOP1YPR028W COQ10Q08058 207 aa1.04□□□□□ -2.24
YOP1YPR028W RRT8Q08219 342 aa1.04□□□□□ -2.24
YOP1YPR028W RRP40Q08285 240 aaKnown RBP1.04□□□□□ -2.24
YOP1YPR028W SYC1Q08553 188 aaPredicted RBP1.04□□□□□ -2.24
YOP1YPR028W YPR011CQ12251 326 aa1.04□□□□□ -2.24
YOP1YPR028W SNU23Q12368 194 aaPredicted RBP1.04□□□□□ -2.24
YOP1YPR028W EMP46Q12396 444 aa1.04□□□□□ -2.24
YOP1YPR028W YLR462WO13556 202 aa1.03□□□□□ -2.24
YOP1YPR028W SGA1P08019 549 aa1.03□□□□□ -2.24
YOP1YPR028W CCA1P21269 546 aa1.03□□□□□ -2.24
YOP1YPR028W SEC22P22214 214 aa1.03□□□□□ -2.24
YOP1YPR028W COS8P38723 381 aa1.03□□□□□ -2.24
YOP1YPR028W GOS1P38736 223 aa1.03□□□□□ -2.24
YOP1YPR028W YEL075CP39972 122 aa1.03□□□□□ -2.24
YOP1YPR028W BNA6P43619 295 aa1.03□□□□□ -2.24
YOP1YPR028W GLG2P47011 380 aa1.03□□□□□ -2.24
YOP1YPR028W SPG4Q04438 115 aa1.03□□□□□ -2.24
YOP1YPR028W YLR173WQ06247 608 aa1.03□□□□□ -2.24
YOP1YPR028W RRS1Q08746 203 aaKnown RBP1.03□□□□□ -2.24
YOP1YPR028W YCT1Q12235 531 aa1.03□□□□□ -2.24
YOP1YPR028W MED4Q12343 284 aa1.03□□□□□ -2.24
YOP1YPR028W EMC6Q12431 108 aa1.03□□□□□ -2.24
YOP1YPR028W INO80P53115 1489 aa1.03□□□□□ -2.24
YOP1YPR028W EHD3P28817 500 aa1.02□□□□□ -2.25
YOP1YPR028W RPT5P33297 434 aaKnown RBP1.02□□□□□ -2.25
YOP1YPR028W YBR096WP38256 230 aa1.02□□□□□ -2.25
YOP1YPR028W BFR1P38934 470 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
YOP1YPR028W ARC15P40518 154 aaRIP-Chip data1.02□□□□□ -2.25not detected
YOP1YPR028W SNX4P47057 423 aa1.02□□□□□ -2.25
YOP1YPR028W YGL034CP53186 121 aa1.02□□□□□ -2.25
YOP1YPR028W SNZ2P53824 298 aa1.02□□□□□ -2.25
YOP1YPR028W RHO3Q00245 231 aaKnown RBP1.02□□□□□ -2.25
YOP1YPR028W CTF19Q02732 369 aa1.02□□□□□ -2.25
YOP1YPR028W RRN5Q02983 363 aa1.02□□□□□ -2.25
YOP1YPR028W RSM10Q03201 203 aa1.02□□□□□ -2.25
YOP1YPR028W KRE28Q04431 385 aa1.02□□□□□ -2.25
YOP1YPR028W FAR8Q05040 523 aa1.02□□□□□ -2.25
YOP1YPR028W YLR179CQ06252 201 aaKnown RBP1.02□□□□□ -2.25
YOP1YPR028W PAM18Q07914 168 aa1.02□□□□□ -2.25
YOP1YPR028W YOR186WQ08560 144 aa1.02□□□□□ -2.25
YOP1YPR028W MSH5Q12175 901 aa1.02□□□□□ -2.25
YOP1YPR028W YOR029WQ12243 111 aa1.02□□□□□ -2.25
YOP1YPR028W BBP1Q12365 385 aa1.02□□□□□ -2.25
YOP1YPR028W PUT1P09368 476 aa1.01□□□□□ -2.25
YOP1YPR028W YOR062CP36025 268 aa1.01□□□□□ -2.25
YOP1YPR028W NRG2P38082 220 aa1.01□□□□□ -2.25
YOP1YPR028W GRE3P38715 327 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
YOP1YPR028W YHR127WP38833 243 aaKnown RBP1.01□□□□□ -2.25
YOP1YPR028W FMC1P40491 155 aa1.01□□□□□ -2.25
YOP1YPR028W DAN1P47178 298 aa1.01□□□□□ -2.25
YOP1YPR028W YGR026WP53217 278 aa1.01□□□□□ -2.25
YOP1YPR028W YNL134CP53912 376 aaKnown RBP1.01□□□□□ -2.25
YOP1YPR028W PRM15Q03262 622 aa1.01□□□□□ -2.25
YOP1YPR028W YMR279CQ03263 540 aa1.01□□□□□ -2.25
YOP1YPR028W ATG31Q12421 196 aa1.01□□□□□ -2.25
YOP1YPR028W MHT1Q12525 324 aa1.01□□□□□ -2.25
YOP1YPR028W SWI1P09547 1314 aa1□□□□□ -2.25
YOP1YPR028W Q0255P03881 472 aa1□□□□□ -2.25
YOP1YPR028W ADH3P07246 375 aaKnown RBP1□□□□□ -2.25
YOP1YPR028W YCR102CP25608 368 aa1□□□□□ -2.25
YOP1YPR028W ERG24P32462 438 aaKnown RBP1□□□□□ -2.25
YOP1YPR028W YHR125WP38831 101 aa1□□□□□ -2.25
YOP1YPR028W HOC1P47124 396 aa1□□□□□ -2.25
YOP1YPR028W YJR079WP47126 109 aa1□□□□□ -2.25
YOP1YPR028W JHD2P47156 728 aaPredicted RBP1□□□□□ -2.25
YOP1YPR028W RMR1P53060 241 aa1□□□□□ -2.25
YOP1YPR028W YGL159WP53110 370 aa1□□□□□ -2.25
YOP1YPR028W SRL4Q03085 281 aa1□□□□□ -2.25
YOP1YPR028W INM2Q05533 292 aa1□□□□□ -2.25
YOP1YPR028W YPR172WQ06608 200 aa1□□□□□ -2.25
YOP1YPR028W YLR030WQ07967 263 aa1□□□□□ -2.25
YOP1YPR028W YPL257WQ08974 193 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms