RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W AGC1Q12482 902 aa1.58□□□□□ -2.16
BRO1YPL084W YBL008W-AQ3E821 79 aa1.58□□□□□ -2.16
BRO1YPL084W DPB2P24482 689 aaPredicted RBP1.58□□□□□ -2.16
BRO1YPL084W RSA4P25382 515 aaKnown RBP1.58□□□□□ -2.16
BRO1YPL084W EHD3P28817 500 aa1.58□□□□□ -2.16
BRO1YPL084W MAL32P38158 584 aa1.58□□□□□ -2.16
BRO1YPL084W TEM1P38987 245 aa1.58□□□□□ -2.16
BRO1YPL084W USE1P53146 245 aa1.58□□□□□ -2.16
BRO1YPL084W MAL12P53341 584 aa1.58□□□□□ -2.16
BRO1YPL084W SRL4Q03085 281 aa1.58□□□□□ -2.16
BRO1YPL084W YPR098CQ06089 161 aa1.58□□□□□ -2.16
BRO1YPL084W ATG17Q06410 417 aa1.58□□□□□ -2.16
BRO1YPL084W YPR147CQ06522 304 aaKnown RBP1.58□□□□□ -2.16
BRO1YPL084W COQ10Q08058 207 aa1.58□□□□□ -2.16
BRO1YPL084W RRS1Q08746 203 aaKnown RBP1.58□□□□□ -2.16
BRO1YPL084W PST1Q12355 444 aa1.58□□□□□ -2.16
BRO1YPL084W YPL247CQ12523 523 aa1.58□□□□□ -2.16
BRO1YPL084W RAD10P06838 210 aa1.57□□□□□ -2.16
BRO1YPL084W TCP1P12612 559 aaKnown RBP1.57□□□□□ -2.16
BRO1YPL084W YBR096WP38256 230 aa1.57□□□□□ -2.16
BRO1YPL084W MDM34P53083 459 aa1.57□□□□□ -2.16
BRO1YPL084W MRPL50P53724 139 aa1.57□□□□□ -2.16
BRO1YPL084W PET117Q02771 107 aa1.57□□□□□ -2.16
BRO1YPL084W YKR104WP0CE69 306 aa1.57□□□□□ -2.16
BRO1YPL084W SYF2P53277 215 aaPredicted RBP1.57□□□□□ -2.16
BRO1YPL084W SNZ2P53824 298 aa1.57□□□□□ -2.16
BRO1YPL084W CLP1Q08685 445 aaPredicted RBP1.57□□□□□ -2.16
BRO1YPL084W CSM4Q08955 156 aa1.57□□□□□ -2.16
BRO1YPL084W YCT1Q12235 531 aa1.57□□□□□ -2.16
BRO1YPL084W NOT5Q12514 560 aaPredicted RBP1.57□□□□□ -2.16
BRO1YPL084W CFT1Q06632 1357 aaKnown RBP1.56□□□□□ -2.16
BRO1YPL084W RNP1P32385 249 aa1.56□□□□□ -2.16
BRO1YPL084W GDH2P33327 1092 aaKnown RBP1.56□□□□□ -2.16
BRO1YPL084W YKR032WP36127 104 aa1.56□□□□□ -2.16
BRO1YPL084W SPT8P38915 602 aa1.56□□□□□ -2.16
BRO1YPL084W FMC1P40491 155 aa1.56□□□□□ -2.16
BRO1YPL084W NUP84P52891 726 aa1.56□□□□□ -2.16
BRO1YPL084W YGL034CP53186 121 aa1.56□□□□□ -2.16
BRO1YPL084W SSU72P53538 206 aaPredicted RBP1.56□□□□□ -2.16
BRO1YPL084W DIA1P54005 336 aa1.56□□□□□ -2.16
BRO1YPL084W GEP5Q12393 293 aa1.56□□□□□ -2.16
BRO1YPL084W CHC1P22137 1653 aaKnown RBP1.56□□□□□ -2.16
BRO1YPL084W YCR016WP25617 290 aaKnown RBP1.56□□□□□ -2.16
BRO1YPL084W SGE1P33335 543 aa1.56□□□□□ -2.16
BRO1YPL084W FZO1P38297 855 aa1.56□□□□□ -2.16
BRO1YPL084W GOS1P38736 223 aa1.56□□□□□ -2.16
BRO1YPL084W JHD2P47156 728 aaPredicted RBP1.56□□□□□ -2.16
BRO1YPL084W SNU23Q12368 194 aaPredicted RBP1.56□□□□□ -2.16
BRO1YPL084W TRM732Q03496 1420 aa1.55□□□□□ -2.16
BRO1YPL084W SRB4P32569 687 aa1.55□□□□□ -2.16
BRO1YPL084W ECM13P38195 257 aa1.55□□□□□ -2.16
BRO1YPL084W SSH1P38353 490 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W GON7P46984 123 aa1.55□□□□□ -2.16
BRO1YPL084W LIA1P47120 325 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W SPG4Q04438 115 aa1.55□□□□□ -2.16
BRO1YPL084W MYO5Q04439 1219 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W YMR114CQ04471 368 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W TAF2P23255 1407 aa1.55□□□□□ -2.16
BRO1YPL084W MRPL39P36533 70 aa1.55□□□□□ -2.16
BRO1YPL084W LDB7P38210 180 aa1.55□□□□□ -2.16
BRO1YPL084W BFR1P38934 470 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
BRO1YPL084W HOC1P47124 396 aa1.55□□□□□ -2.16
BRO1YPL084W YJR079WP47126 109 aa1.55□□□□□ -2.16
BRO1YPL084W YJR141WP47172 347 aaPredicted RBP1.55□□□□□ -2.16
BRO1YPL084W MRH4P53166 561 aa1.55□□□□□ -2.16
BRO1YPL084W RHO3Q00245 231 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W GRH1Q04410 372 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W KRE28Q04431 385 aa1.55□□□□□ -2.16
BRO1YPL084W YDR124WQ04608 324 aa1.55□□□□□ -2.16
BRO1YPL084W YLR179CQ06252 201 aaKnown RBP1.55□□□□□ -2.16
BRO1YPL084W YOR268CQ08734 132 aa1.55□□□□□ -2.16
BRO1YPL084W DOP1Q03921 1698 aa1.55□□□□□ -2.16
BRO1YPL084W TRM3Q07527 1436 aa1.54□□□□□ -2.16
BRO1YPL084W SWI1P09547 1314 aa1.54□□□□□ -2.16
BRO1YPL084W PPH21P23594 369 aa1.54□□□□□ -2.16
BRO1YPL084W GOT1Q03554 138 aa1.54□□□□□ -2.16
BRO1YPL084W MIX17Q03667 156 aa1.54□□□□□ -2.16
BRO1YPL084W RDS3Q06835 107 aaPredicted RBP1.54□□□□□ -2.16
BRO1YPL084W RRP40Q08285 240 aaKnown RBP1.54□□□□□ -2.16
BRO1YPL084W SYC1Q08553 188 aaPredicted RBP1.54□□□□□ -2.16
BRO1YPL084W MATALPHA1P0CY06 175 aa1.54□□□□□ -2.16
BRO1YPL084W HMLALPHA1P0CY07 175 aa1.54□□□□□ -2.16
BRO1YPL084W MSN4P33749 630 aa1.54□□□□□ -2.16
BRO1YPL084W DRE2P36152 348 aa1.54□□□□□ -2.16
BRO1YPL084W YHB1P39676 399 aaKnown RBP1.54□□□□□ -2.16
BRO1YPL084W THO1P40040 218 aaKnown RBP1.54□□□□□ -2.16
BRO1YPL084W SEC22P22214 214 aa1.53□□□□□ -2.16
BRO1YPL084W UTR5P32630 166 aa1.53□□□□□ -2.16
BRO1YPL084W YGP1P38616 354 aaKnown RBP1.53□□□□□ -2.16
BRO1YPL084W MED6P38782 295 aa1.53□□□□□ -2.16
BRO1YPL084W YOR186WQ08560 144 aa1.53□□□□□ -2.16
BRO1YPL084W DPM1P14020 267 aaKnown RBP1.52□□□□□ -2.17
BRO1YPL084W YHR127WP38833 243 aaKnown RBP1.52□□□□□ -2.17
BRO1YPL084W YER085CP40058 173 aa1.52□□□□□ -2.17
BRO1YPL084W ULS1Q08562 1619 aa1.52□□□□□ -2.17
BRO1YPL084W YLR283WQ05867 314 aa1.52□□□□□ -2.17
BRO1YPL084W YLR126CQ12288 251 aa1.52□□□□□ -2.17
BRO1YPL084W EMP46Q12396 444 aa1.52□□□□□ -2.17
BRO1YPL084W POL1P13382 1468 aa1.52□□□□□ -2.17
BRO1YPL084W YER189WP40104 122 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms