RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C RSM28Q03430 361 aa4.75□□□□□ -1.65
RAT1YOR048C SPR28Q04921 423 aa4.75□□□□□ -1.65
RAT1YOR048C YPR127WQ06494 345 aa4.75□□□□□ -1.65
RAT1YOR048C ARR2Q06597 130 aa4.75□□□□□ -1.65
RAT1YOR048C BDS1Q08347 646 aa4.75□□□□□ -1.65
RAT1YOR048C PRP46Q12417 451 aaPredicted RBP4.75□□□□□ -1.65
RAT1YOR048C RIP1P08067 215 aa4.74□□□□□ -1.65
RAT1YOR048C RIB5P38145 238 aa4.74□□□□□ -1.65
RAT1YOR048C CDS1P38221 457 aa4.74□□□□□ -1.65
RAT1YOR048C ADO1P47143 340 aaKnown RBP4.74□□□□□ -1.65
RAT1YOR048C DAN1P47178 298 aa4.74□□□□□ -1.65
RAT1YOR048C TRM9P49957 279 aa4.74□□□□□ -1.65
RAT1YOR048C YGL204CP53089 101 aa4.74□□□□□ -1.65
RAT1YOR048C PKP2P53170 491 aa4.74□□□□□ -1.65
RAT1YOR048C HHO1P53551 258 aa4.74□□□□□ -1.65
RAT1YOR048C TSA2Q04120 196 aa4.74□□□□□ -1.65
RAT1YOR048C YMR253CQ04835 414 aa4.74□□□□□ -1.65
RAT1YOR048C PRM4Q12498 284 aa4.74□□□□□ -1.65
RAT1YOR048C SLC1P33333 303 aa4.74□□□□□ -1.65
RAT1YOR048C DLS1P40366 167 aa4.74□□□□□ -1.65
RAT1YOR048C YPS6P40583 537 aa4.74□□□□□ -1.65
RAT1YOR048C VPS28Q02767 242 aa4.74□□□□□ -1.65
RAT1YOR048C HAS1Q03532 505 aaKnown RBP4.74□□□□□ -1.65
RAT1YOR048C GMC1Q04399 608 aa4.74□□□□□ -1.65
RAT1YOR048C SEI1Q06058 285 aa4.74□□□□□ -1.65
RAT1YOR048C TDA6Q06466 467 aa4.74□□□□□ -1.65
RAT1YOR048C YPR084WQ06821 456 aa4.74□□□□□ -1.65
RAT1YOR048C LUC7Q07508 261 aaPredicted RBP4.74□□□□□ -1.65
RAT1YOR048C PRS5Q12265 496 aaKnown RBP4.74□□□□□ -1.65
RAT1YOR048C MCM10P32354 571 aa4.73□□□□□ -1.65
RAT1YOR048C MRPL27P36526 146 aaPredicted RBP4.73□□□□□ -1.65
RAT1YOR048C IKI1P38874 309 aa4.73□□□□□ -1.65
RAT1YOR048C SPG5P42933 373 aa4.73□□□□□ -1.65
RAT1YOR048C SEH1P53011 349 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C RNH201P53942 307 aa4.73□□□□□ -1.65
RAT1YOR048C ASM4Q05166 528 aa4.73□□□□□ -1.65
RAT1YOR048C RTT103Q05543 409 aa4.73□□□□□ -1.65
RAT1YOR048C YOR385WQ08909 290 aa4.73□□□□□ -1.65
RAT1YOR048C SRO7Q12038 1033 aa4.73□□□□□ -1.65
RAT1YOR048C PET20Q99373 253 aa4.73□□□□□ -1.65
RAT1YOR048C COX9P07255 59 aa4.73□□□□□ -1.65
RAT1YOR048C GDH1P07262 454 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C CYR1P08678 2026 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C RFA1P22336 621 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C ERG3P32353 365 aa4.73□□□□□ -1.65
RAT1YOR048C SNC2P33328 115 aa4.73□□□□□ -1.65
RAT1YOR048C COS9P36034 407 aa4.73□□□□□ -1.65
RAT1YOR048C SYS1P41544 203 aa4.73□□□□□ -1.65
RAT1YOR048C LSB3P43603 459 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C SOL1P50278 321 aa4.73□□□□□ -1.65
RAT1YOR048C PBP1P53297 722 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C NCE101Q02820 53 aa4.73□□□□□ -1.65
RAT1YOR048C CAC2Q04199 468 aa4.73□□□□□ -1.65
RAT1YOR048C GIC2Q06648 383 aa4.73□□□□□ -1.65
RAT1YOR048C LSO2Q3E772 92 aaKnown RBP4.73□□□□□ -1.65
RAT1YOR048C FPR1P20081 114 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C MNS1P32906 549 aa4.72□□□□□ -1.65
RAT1YOR048C YKL071WP36086 256 aa4.72□□□□□ -1.65
RAT1YOR048C GNA1P43577 159 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C YJR141WP47172 347 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C YGL114WP53134 725 aa4.72□□□□□ -1.65
RAT1YOR048C TDA7P53882 636 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C TPP1Q03796 238 aa4.72□□□□□ -1.65
RAT1YOR048C CDC39P25655 2108 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C ARF1P11076 181 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C RPS0AP32905 252 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C MRPL37P36532 105 aa4.72□□□□□ -1.65
RAT1YOR048C EDS1P38073 919 aa4.72□□□□□ -1.65
RAT1YOR048C ATP3P38077 311 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C VBA2P38358 474 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C YIL152WP40455 235 aa4.72□□□□□ -1.65
RAT1YOR048C AVT7P40501 490 aa4.72□□□□□ -1.65
RAT1YOR048C COQ5P49017 307 aa4.72□□□□□ -1.65
RAT1YOR048C MRPL22P53881 309 aa4.72□□□□□ -1.65
RAT1YOR048C YML053CQ04978 212 aa4.72□□□□□ -1.65
RAT1YOR048C MCH4Q08268 501 aa4.72□□□□□ -1.65
RAT1YOR048C FAS1P07149 2051 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C CBP6P07253 162 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C YSF3P0C074 85 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C SCL1P21243 252 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C SSS1P35179 80 aa4.72□□□□□ -1.65
RAT1YOR048C CFD1P40558 293 aa4.72□□□□□ -1.65
RAT1YOR048C SLX9P53251 210 aaPredicted RBP4.72□□□□□ -1.65
RAT1YOR048C ACT1P60010 375 aaKnown RBP4.72□□□□□ -1.65
RAT1YOR048C SYM1Q06563 197 aa4.72□□□□□ -1.65
RAT1YOR048C YOR343CQ12484 108 aa4.72□□□□□ -1.65
RAT1YOR048C PTP1P25044 335 aa4.71□□□□□ -1.66
RAT1YOR048C ATG15P25641 520 aa4.71□□□□□ -1.66
RAT1YOR048C FRM2P37261 193 aa4.71□□□□□ -1.66
RAT1YOR048C SHM2P37291 469 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C PGD1P40356 397 aa4.71□□□□□ -1.66
RAT1YOR048C ACS2P52910 683 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C BSC5P53755 489 aa4.71□□□□□ -1.66
RAT1YOR048C AAH1P53909 347 aa4.71□□□□□ -1.66
RAT1YOR048C TGL2P54857 326 aa4.71□□□□□ -1.66
RAT1YOR048C RHO3Q00245 231 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C CAB5Q03941 241 aa4.71□□□□□ -1.66
RAT1YOR048C MRPL1Q04599 285 aa4.71□□□□□ -1.66
RAT1YOR048C PAL1Q05518 499 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C YRA1Q12159 226 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms