RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YJR030CP47101 745 aa3.19□□□□□ -1.9
PTM1YKL039W EOS1P53938 366 aa3.19□□□□□ -1.9
PTM1YKL039W RMI1Q02685 241 aa3.19□□□□□ -1.9
PTM1YKL039W YML096WQ04489 525 aa3.19□□□□□ -1.9
PTM1YKL039W CDC123Q05791 360 aa3.19□□□□□ -1.9
PTM1YKL039W NEJ1Q06148 342 aa3.19□□□□□ -1.9
PTM1YKL039W DTD1Q07648 150 aaKnown RBP3.19□□□□□ -1.9
PTM1YKL039W YLR012CQ07927 99 aa3.19□□□□□ -1.9
PTM1YKL039W PGC1Q08959 321 aa3.19□□□□□ -1.9
PTM1YKL039W LSO2Q3E772 92 aaKnown RBP3.19□□□□□ -1.9
PTM1YKL039W MHF1Q3E835 90 aa3.19□□□□□ -1.9
PTM1YKL039W SAS5Q99314 248 aa3.19□□□□□ -1.9
PTM1YKL039W UBA3Q99344 299 aa3.19□□□□□ -1.9
PTM1YKL039W RPL43AP0CX25 92 aaKnown RBP3.18□□□□□ -1.9
PTM1YKL039W RPL43BP0CX26 92 aa3.18□□□□□ -1.9
PTM1YKL039W MET16P18408 261 aaPredicted RBP3.18□□□□□ -1.9
PTM1YKL039W CCA1P21269 546 aa3.18□□□□□ -1.9
PTM1YKL039W DAD2P36162 133 aa3.18□□□□□ -1.9
PTM1YKL039W HOC1P47124 396 aa3.18□□□□□ -1.9
PTM1YKL039W PRP24P49960 444 aaKnown RBP3.18□□□□□ -1.9
PTM1YKL039W DIE2P50076 525 aa3.18□□□□□ -1.9
PTM1YKL039W MPS2P53159 387 aa3.18□□□□□ -1.9
PTM1YKL039W PRM1P53835 661 aa3.18□□□□□ -1.9
PTM1YKL039W SUR7P54003 302 aa3.18□□□□□ -1.9
PTM1YKL039W LSM3P57743 89 aaKnown RBP3.18□□□□□ -1.9
PTM1YKL039W TRM12Q04235 462 aa3.18□□□□□ -1.9
PTM1YKL039W PER33Q12144 273 aa3.18□□□□□ -1.9
PTM1YKL039W TRM10Q12400 293 aa3.18□□□□□ -1.9
PTM1YKL039W LAG2Q92325 660 aa3.18□□□□□ -1.9
PTM1YKL039W UTP20P35194 2493 aaKnown RBP3.17□□□□□ -1.9
PTM1YKL039W COS2P0CX12 379 aa3.17□□□□□ -1.9
PTM1YKL039W COS3P0CX13 379 aa3.17□□□□□ -1.9
PTM1YKL039W PTC1P35182 281 aa3.17□□□□□ -1.9
PTM1YKL039W YHI9P38765 294 aa3.17□□□□□ -1.9
PTM1YKL039W KEL2P50090 882 aa3.17□□□□□ -1.9
PTM1YKL039W CWC23P52868 283 aaPredicted RBP3.17□□□□□ -1.9
PTM1YKL039W NQM1P53228 333 aaPredicted RBP3.17□□□□□ -1.9
PTM1YKL039W LST7P53237 242 aa3.17□□□□□ -1.9
PTM1YKL039W DID2P69771 204 aa3.17□□□□□ -1.9
PTM1YKL039W MRX11Q03079 207 aa3.17□□□□□ -1.9
PTM1YKL039W YMR099CQ03161 297 aaKnown RBP3.17□□□□□ -1.9
PTM1YKL039W CSN9Q03981 162 aa3.17□□□□□ -1.9
PTM1YKL039W SPG3Q04398 127 aaPredicted RBP3.17□□□□□ -1.9
PTM1YKL039W APC4Q04601 652 aa3.17□□□□□ -1.9
PTM1YKL039W FEX1Q08913 375 aa3.17□□□□□ -1.9
PTM1YKL039W FRE8Q12209 686 aa3.17□□□□□ -1.9
PTM1YKL039W YOR012WQ12351 137 aa3.17□□□□□ -1.9
PTM1YKL039W ATG31Q12421 196 aa3.17□□□□□ -1.9
PTM1YKL039W PFK27Q12471 397 aaPredicted RBP3.17□□□□□ -1.9
PTM1YKL039W NSP1P14907 823 aaKnown RBP3.17□□□□□ -1.9
PTM1YKL039W UGA1P17649 471 aa3.17□□□□□ -1.9
PTM1YKL039W RPB4P20433 221 aaPredicted RBP3.17□□□□□ -1.9
PTM1YKL039W DAL81P21657 970 aa3.17□□□□□ -1.9
PTM1YKL039W YCR090CP25654 182 aaKnown RBP3.17□□□□□ -1.9
PTM1YKL039W ARN2P38724 620 aa3.17□□□□□ -1.9
PTM1YKL039W AIM18P38884 321 aa3.17□□□□□ -1.9
PTM1YKL039W IPT1P38954 527 aa3.17□□□□□ -1.9
PTM1YKL039W PHB1P40961 287 aa3.17□□□□□ -1.9
PTM1YKL039W SER2P42941 309 aa3.17□□□□□ -1.9
PTM1YKL039W YGR067CP53243 804 aa3.17□□□□□ -1.9
PTM1YKL039W GTR2P53290 341 aa3.17□□□□□ -1.9
PTM1YKL039W NHP10Q03435 203 aa3.17□□□□□ -1.9
PTM1YKL039W GAS2Q06135 555 aa3.17□□□□□ -1.9
PTM1YKL039W YOL024WQ08172 172 aa3.17□□□□□ -1.9
PTM1YKL039W YNG1Q08465 219 aa3.17□□□□□ -1.9
PTM1YKL039W YMR030W-AQ3E760 96 aa3.17□□□□□ -1.9
PTM1YKL039W RIB3Q99258 208 aa3.17□□□□□ -1.9
PTM1YKL039W IZH4Q99393 312 aa3.17□□□□□ -1.9
PTM1YKL039W MEC1P38111 2368 aa3.16□□□□□ -1.9
PTM1YKL039W POL2P21951 2222 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W YBR056W-AI2HB52 66 aa3.16□□□□□ -1.9
PTM1YKL039W IPP1P00817 287 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W PET494P07390 489 aaPredicted RBP3.16□□□□□ -1.9
PTM1YKL039W DBP3P20447 523 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W EPT1P22140 391 aa3.16□□□□□ -1.9
PTM1YKL039W RPL24BP24000 155 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W ATG22P25568 528 aa3.16□□□□□ -1.9
PTM1YKL039W CIN8P27895 1000 aa3.16□□□□□ -1.9
PTM1YKL039W CWP1P28319 239 aa3.16□□□□□ -1.9
PTM1YKL039W ECM34P38728 170 aa3.16□□□□□ -1.9
PTM1YKL039W IPI1P38803 334 aaPredicted RBP3.16□□□□□ -1.9
PTM1YKL039W MNN9P39107 395 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W SOP4P39543 234 aaPredicted RBP3.16□□□□□ -1.9
PTM1YKL039W YER034WP40022 185 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W LSM1P47017 172 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W APS3P47064 194 aa3.16□□□□□ -1.9
PTM1YKL039W AIF1P52923 378 aa3.16□□□□□ -1.9
PTM1YKL039W GPI11Q06636 219 aa3.16□□□□□ -1.9
PTM1YKL039W YLR413WQ06689 675 aa3.16□□□□□ -1.9
PTM1YKL039W YOL019WQ08157 551 aa3.16□□□□□ -1.9
PTM1YKL039W FEX2Q08991 375 aa3.16□□□□□ -1.9
PTM1YKL039W YLR046CQ12253 270 aa3.16□□□□□ -1.9
PTM1YKL039W YOR214CQ12282 236 aa3.16□□□□□ -1.9
PTM1YKL039W RPN6Q12377 434 aa3.16□□□□□ -1.9
PTM1YKL039W YPR1Q12458 312 aa3.16□□□□□ -1.9
PTM1YKL039W FMP16Q12497 93 aa3.16□□□□□ -1.9
PTM1YKL039W EFG1Q3E705 233 aaKnown RBP3.16□□□□□ -1.9
PTM1YKL039W MHF2Q3E829 80 aa3.16□□□□□ -1.9
PTM1YKL039W RAD7P06779 565 aa3.15□□□□□ -1.91
PTM1YKL039W PHO84P25297 587 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms