RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W FZO1P38297 855 aa1.42□□□□□ -2.18
NUP82YJL061W YGP1P38616 354 aaKnown RBP1.42□□□□□ -2.18
NUP82YJL061W BIG1P38813 335 aa1.42□□□□□ -2.18
NUP82YJL061W SMB1P40018 196 aaKnown RBP1.42□□□□□ -2.18
NUP82YJL061W SLM2P53955 656 aa1.42□□□□□ -2.18
NUP82YJL061W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
NUP82YJL061W CGI121Q03705 181 aaKnown RBP1.42□□□□□ -2.18
NUP82YJL061W YPR098CQ06089 161 aa1.42□□□□□ -2.18
NUP82YJL061W EMP46Q12396 444 aa1.42□□□□□ -2.18
NUP82YJL061W SAS5Q99314 248 aa1.42□□□□□ -2.18
NUP82YJL061W INO80P53115 1489 aa1.42□□□□□ -2.18
NUP82YJL061W SGA1P08019 549 aa1.41□□□□□ -2.18
NUP82YJL061W YKR104WP0CE69 306 aa1.41□□□□□ -2.18
NUP82YJL061W SEC22P22214 214 aa1.41□□□□□ -2.18
NUP82YJL061W SCO1P23833 295 aa1.41□□□□□ -2.18
NUP82YJL061W HOM6P31116 359 aaKnown RBP1.41□□□□□ -2.18
NUP82YJL061W OST2P46964 130 aa1.41□□□□□ -2.18
NUP82YJL061W USE1P53146 245 aa1.41□□□□□ -2.18
NUP82YJL061W MRH4P53166 561 aa1.41□□□□□ -2.18
NUP82YJL061W CAB4P53332 305 aa1.41□□□□□ -2.18
NUP82YJL061W COS6P53344 381 aa1.41□□□□□ -2.18
NUP82YJL061W RRP40Q08285 240 aaKnown RBP1.41□□□□□ -2.18
NUP82YJL061W SYC1Q08553 188 aaPredicted RBP1.41□□□□□ -2.18
NUP82YJL061W SGE1P33335 543 aa1.4□□□□□ -2.18
NUP82YJL061W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
NUP82YJL061W MRPL39P36533 70 aa1.4□□□□□ -2.18
NUP82YJL061W YHB1P39676 399 aaKnown RBP1.4□□□□□ -2.18
NUP82YJL061W COQ10Q08058 207 aa1.4□□□□□ -2.18
NUP82YJL061W RRT8Q08219 342 aa1.4□□□□□ -2.18
NUP82YJL061W CSM4Q08955 156 aa1.4□□□□□ -2.18
NUP82YJL061W SNU23Q12368 194 aaPredicted RBP1.4□□□□□ -2.18
NUP82YJL061W EMC6Q12431 108 aa1.4□□□□□ -2.18
NUP82YJL061W SCM4P32564 187 aa1.4□□□□□ -2.19
NUP82YJL061W RCN1P36054 211 aa1.4□□□□□ -2.19
NUP82YJL061W COS8P38723 381 aa1.4□□□□□ -2.19
NUP82YJL061W YER189WP40104 122 aa1.4□□□□□ -2.19
NUP82YJL061W SNZ3P43545 298 aa1.4□□□□□ -2.19
NUP82YJL061W GLG2P47011 380 aa1.4□□□□□ -2.19
NUP82YJL061W SPG4Q04438 115 aa1.4□□□□□ -2.19
NUP82YJL061W RRS1Q08746 203 aaKnown RBP1.4□□□□□ -2.19
NUP82YJL061W CCA1P21269 546 aa1.39□□□□□ -2.19
NUP82YJL061W THO1P40040 218 aaKnown RBP1.39□□□□□ -2.19
NUP82YJL061W BNA6P43619 295 aa1.39□□□□□ -2.19
NUP82YJL061W YGL034CP53186 121 aa1.39□□□□□ -2.19
NUP82YJL061W MRPL50P53724 139 aa1.39□□□□□ -2.19
NUP82YJL061W YLR173WQ06247 608 aa1.39□□□□□ -2.19
NUP82YJL061W MED4Q12343 284 aa1.39□□□□□ -2.19
NUP82YJL061W BBP1Q12365 385 aa1.39□□□□□ -2.19
NUP82YJL061W GOS1P38736 223 aa1.39□□□□□ -2.19
NUP82YJL061W RHO3Q00245 231 aaKnown RBP1.39□□□□□ -2.19
NUP82YJL061W RSM10Q03201 203 aa1.39□□□□□ -2.19
NUP82YJL061W YLR179CQ06252 201 aaKnown RBP1.39□□□□□ -2.19
NUP82YJL061W MSH5Q12175 901 aa1.39□□□□□ -2.19
NUP82YJL061W YCT1Q12235 531 aa1.39□□□□□ -2.19
NUP82YJL061W YLR462WO13556 202 aa1.38□□□□□ -2.19
NUP82YJL061W EHD3P28817 500 aa1.38□□□□□ -2.19
NUP82YJL061W RPT5P33297 434 aaKnown RBP1.38□□□□□ -2.19
NUP82YJL061W BFR1P38934 470 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19 RIP-Chip
NUP82YJL061W YEL075CP39972 122 aa1.38□□□□□ -2.19
NUP82YJL061W ARC15P40518 154 aaRIP-Chip data1.38□□□□□ -2.19not detected
NUP82YJL061W SNZ2P53824 298 aa1.38□□□□□ -2.19
NUP82YJL061W CTF19Q02732 369 aa1.38□□□□□ -2.19
NUP82YJL061W YOR029WQ12243 111 aa1.38□□□□□ -2.19
NUP82YJL061W SWI1P09547 1314 aa1.38□□□□□ -2.19
NUP82YJL061W PUT1P09368 476 aa1.37□□□□□ -2.19
NUP82YJL061W YBR096WP38256 230 aa1.37□□□□□ -2.19
NUP82YJL061W GRE3P38715 327 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
NUP82YJL061W SNX4P47057 423 aa1.37□□□□□ -2.19
NUP82YJL061W YNL134CP53912 376 aaKnown RBP1.37□□□□□ -2.19
NUP82YJL061W FAR8Q05040 523 aa1.37□□□□□ -2.19
NUP82YJL061W YOR186WQ08560 144 aa1.37□□□□□ -2.19
NUP82YJL061W YOR062CP36025 268 aa1.37□□□□□ -2.19
NUP82YJL061W DAN1P47178 298 aa1.37□□□□□ -2.19
NUP82YJL061W RRN5Q02983 363 aa1.37□□□□□ -2.19
NUP82YJL061W YMR279CQ03263 540 aa1.37□□□□□ -2.19
NUP82YJL061W KRE28Q04431 385 aa1.37□□□□□ -2.19
NUP82YJL061W PAM18Q07914 168 aa1.37□□□□□ -2.19
NUP82YJL061W MHT1Q12525 324 aa1.37□□□□□ -2.19
NUP82YJL061W NRG2P38082 220 aa1.36□□□□□ -2.19
NUP82YJL061W YHR127WP38833 243 aaKnown RBP1.36□□□□□ -2.19
NUP82YJL061W YGR026WP53217 278 aa1.36□□□□□ -2.19
NUP82YJL061W Q0255P03881 472 aa1.36□□□□□ -2.19
NUP82YJL061W ADH3P07246 375 aaKnown RBP1.36□□□□□ -2.19
NUP82YJL061W YCR102CP25608 368 aa1.36□□□□□ -2.19
NUP82YJL061W ERG24P32462 438 aaKnown RBP1.36□□□□□ -2.19
NUP82YJL061W YHR125WP38831 101 aa1.36□□□□□ -2.19
NUP82YJL061W FMC1P40491 155 aa1.36□□□□□ -2.19
NUP82YJL061W YJR079WP47126 109 aa1.36□□□□□ -2.19
NUP82YJL061W RMR1P53060 241 aa1.36□□□□□ -2.19
NUP82YJL061W YGL159WP53110 370 aa1.36□□□□□ -2.19
NUP82YJL061W SRL4Q03085 281 aa1.36□□□□□ -2.19
NUP82YJL061W PRM15Q03262 622 aa1.36□□□□□ -2.19
NUP82YJL061W ATG31Q12421 196 aa1.36□□□□□ -2.19
NUP82YJL061W MSA2P36157 363 aa1.35□□□□□ -2.19
NUP82YJL061W HOC1P47124 396 aa1.35□□□□□ -2.19
NUP82YJL061W JHD2P47156 728 aaPredicted RBP1.35□□□□□ -2.19
NUP82YJL061W GTR2P53290 341 aa1.35□□□□□ -2.19
NUP82YJL061W INM2Q05533 292 aa1.35□□□□□ -2.19
NUP82YJL061W YPR172WQ06608 200 aa1.35□□□□□ -2.19
NUP82YJL061W YLR030WQ07967 263 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms