RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeastyeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKP1YIL042C PCL6P40038 420 aa13.15□□□□□ -0.3
PKP1YIL042C YER079WP40052 210 aaKnown RBP13.15□□□□□ -0.3
PKP1YIL042C NSA1P53136 463 aaPredicted RBP13.15□□□□□ -0.3
PKP1YIL042C GEP7P53171 287 aa13.15□□□□□ -0.3
PKP1YIL042C SMM1P53720 384 aaKnown RBP13.15□□□□□ -0.3
PKP1YIL042C PRP3Q03338 469 aaPredicted RBP13.15□□□□□ -0.3
PKP1YIL042C YLR358CO13565 187 aa13.14□□□□□ -0.31
PKP1YIL042C QCR7P00128 127 aa13.14□□□□□ -0.31
PKP1YIL042C RPL15AP05748 204 aaKnown RBP13.14□□□□□ -0.31
PKP1YIL042C SIR2P06700 562 aa13.14□□□□□ -0.31
PKP1YIL042C RPB9P27999 122 aa13.14□□□□□ -0.31
PKP1YIL042C VMA11P32842 164 aa13.14□□□□□ -0.31
PKP1YIL042C MSS4P38994 779 aa13.14□□□□□ -0.31
PKP1YIL042C YJL218WP40892 196 aaKnown RBP13.14□□□□□ -0.31
PKP1YIL042C GON7P46984 123 aa13.14□□□□□ -0.31
PKP1YIL042C EFM3P47163 339 aa13.14□□□□□ -0.31
PKP1YIL042C TAF4P50105 388 aa13.14□□□□□ -0.31
PKP1YIL042C RPL15BP54780 204 aaPredicted RBP13.14□□□□□ -0.31
PKP1YIL042C SLM1P40485 686 aa13.13□□□□□ -0.31
PKP1YIL042C YDR114CQ04597 100 aa13.13□□□□□ -0.31
PKP1YIL042C TDH2P00358 332 aaKnown RBP13.12□□□□□ -0.31
PKP1YIL042C CDC28P00546 298 aaKnown RBP13.12□□□□□ -0.31
PKP1YIL042C SNC2P33328 115 aa13.12□□□□□ -0.31
PKP1YIL042C YHC3P47040 408 aa13.12□□□□□ -0.31
PKP1YIL042C IMO32P53219 342 aa13.12□□□□□ -0.31
PKP1YIL042C TMA20P89886 181 aaPredicted RBP13.12□□□□□ -0.31
PKP1YIL042C PIN3Q06449 215 aa13.12□□□□□ -0.31
PKP1YIL042C RRP15Q06511 250 aaPredicted RBP13.12□□□□□ -0.31
PKP1YIL042C CDC31P06704 161 aaKnown RBP13.11□□□□□ -0.31
PKP1YIL042C GCD1P09032 578 aaPredicted RBP13.11□□□□□ -0.31
PKP1YIL042C GZF3P42944 551 aaKnown RBP13.11□□□□□ -0.31
PKP1YIL042C SUT1P53032 299 aaKnown RBP13.11□□□□□ -0.31
PKP1YIL042C YNR064CP53750 290 aa13.11□□□□□ -0.31
PKP1YIL042C GRX3Q03835 250 aa13.11□□□□□ -0.31
PKP1YIL042C MRX9Q07349 420 aaKnown RBP13.11□□□□□ -0.31
PKP1YIL042C SOL3P38858 249 aa13.1□□□□□ -0.31
PKP1YIL042C RCF1Q03713 159 aa13.1□□□□□ -0.31
PKP1YIL042C FCY22Q12119 530 aa13.1□□□□□ -0.31
PKP1YIL042C YOR029WQ12243 111 aa13.1□□□□□ -0.31
PKP1YIL042C HUT1Q12520 339 aa13.1□□□□□ -0.31
PKP1YIL042C CCW14O13547 238 aa13.09□□□□□ -0.31
PKP1YIL042C GPI18P38211 433 aa13.09□□□□□ -0.31
PKP1YIL042C CCZ1P38273 704 aa13.09□□□□□ -0.31
PKP1YIL042C DOC1P53068 250 aa13.09□□□□□ -0.31
PKP1YIL042C SCW4P53334 386 aaKnown RBP13.09□□□□□ -0.31
PKP1YIL042C YMR105W-AQ8TGS8 64 aa13.09□□□□□ -0.31
PKP1YIL042C MRPL36P36531 177 aa13.08□□□□□ -0.32
PKP1YIL042C PRM15Q03262 622 aa13.08□□□□□ -0.32
PKP1YIL042C YDR179W-AQ03983 463 aa13.08□□□□□ -0.32
PKP1YIL042C YMR254CQ04838 102 aa13.08□□□□□ -0.32
PKP1YIL042C GRC3Q07845 632 aa13.08□□□□□ -0.32
PKP1YIL042C TIR4Q12218 487 aaPredicted RBP13.08□□□□□ -0.32
PKP1YIL042C MPD1Q12404 318 aaKnown RBP13.08□□□□□ -0.32
PKP1YIL042C GCN4P03069 281 aa13.07□□□□□ -0.32
PKP1YIL042C YBR137WP38276 179 aa13.07□□□□□ -0.32
PKP1YIL042C AIR1P40507 360 aaKnown RBP13.07□□□□□ -0.32
PKP1YIL042C SSN8P47821 323 aa13.07□□□□□ -0.32
PKP1YIL042C VMA3P25515 160 aa13.06□□□□□ -0.32
PKP1YIL042C LNP1P38878 278 aa13.06□□□□□ -0.32
PKP1YIL042C RRP17Q04031 235 aaPredicted RBP13.06□□□□□ -0.32
PKP1YIL042C UTP15Q04305 513 aaKnown RBP13.06□□□□□ -0.32
PKP1YIL042C FUR4P05316 633 aaKnown RBP13.05□□□□□ -0.32
PKP1YIL042C HIS3P06633 220 aa13.05□□□□□ -0.32
PKP1YIL042C SPS4P09937 338 aa13.05□□□□□ -0.32
PKP1YIL042C PET18P25362 215 aa13.05□□□□□ -0.32
PKP1YIL042C CNE1P27825 502 aa13.05□□□□□ -0.32
PKP1YIL042C ARO4P32449 370 aaKnown RBP13.05□□□□□ -0.32
PKP1YIL042C IES6P32617 166 aa13.05□□□□□ -0.32
PKP1YIL042C UMP1P38293 148 aa13.05□□□□□ -0.32
PKP1YIL042C APJ1P53940 528 aa13.05□□□□□ -0.32
PKP1YIL042C YPL067CQ02754 198 aa13.05□□□□□ -0.32
PKP1YIL042C YMR317WQ04893 1140 aa13.05□□□□□ -0.32
PKP1YIL042C IMP1P28627 190 aa13.04□□□□□ -0.32
PKP1YIL042C SHE2P36068 246 aaKnown RBP RIP-Chip data13.04□□□□□ -0.32not detected
PKP1YIL042C OSH7P38755 437 aa13.04□□□□□ -0.32
PKP1YIL042C BNA6P43619 295 aa13.04□□□□□ -0.32
PKP1YIL042C CAC2Q04199 468 aa13.04□□□□□ -0.32
PKP1YIL042C RIM9Q04734 239 aa13.04□□□□□ -0.32
PKP1YIL042C ATG17Q06410 417 aa13.04□□□□□ -0.32
PKP1YIL042C MTC7P32633 139 aa13.03□□□□□ -0.32
PKP1YIL042C NAT2P37293 288 aa13.03□□□□□ -0.32
PKP1YIL042C FMP23P38231 175 aa13.03□□□□□ -0.32
PKP1YIL042C RBL2P48606 106 aaKnown RBP13.03□□□□□ -0.32
PKP1YIL042C SPO19Q03029 223 aa13.03□□□□□ -0.32
PKP1YIL042C YLR283WQ05867 314 aa13.03□□□□□ -0.32
PKP1YIL042C MRPL35Q06678 367 aa13.03□□□□□ -0.32
PKP1YIL042C EAF3Q12432 401 aa13.03□□□□□ -0.32
PKP1YIL042C RPL25P04456 142 aaKnown RBP13.02□□□□□ -0.33
PKP1YIL042C RPL24BP24000 155 aaKnown RBP13.02□□□□□ -0.33
PKP1YIL042C PEX4P29340 183 aa13.02□□□□□ -0.33
PKP1YIL042C BUD25P85052 153 aa13.02□□□□□ -0.33
PKP1YIL042C PRP11Q07350 266 aaPredicted RBP13.02□□□□□ -0.33
PKP1YIL042C NKP1Q12493 238 aa13.02□□□□□ -0.33
PKP1YIL042C MID1P41821 548 aa13.01□□□□□ -0.33
PKP1YIL042C XPT1P47165 209 aa13.01□□□□□ -0.33
PKP1YIL042C UFD1P53044 361 aa13.01□□□□□ -0.33
PKP1YIL042C GPN3Q06543 272 aa13.01□□□□□ -0.33
PKP1YIL042C YOR186WQ08560 144 aa13.01□□□□□ -0.33
PKP1YIL042C YDL009CQ12210 107 aa13.01□□□□□ -0.33
PKP1YIL042C REP2P03872 296 aa13□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms