RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W NFI1Q12216 726 aa-0.16□□□□□ -2.44
APQ12YIL040W YPR011CQ12251 326 aa-0.16□□□□□ -2.44
APQ12YIL040W BBP1Q12365 385 aa-0.16□□□□□ -2.44
APQ12YIL040W YOS9Q99220 542 aa-0.16□□□□□ -2.44
APQ12YIL040W MSB2P32334 1306 aa-0.16□□□□□ -2.44
APQ12YIL040W SIR4P11978 1358 aa-0.17□□□□□ -2.44
APQ12YIL040W RPL9AP05738 191 aaKnown RBP-0.17□□□□□ -2.44
APQ12YIL040W GRX2P17695 143 aaKnown RBP-0.17□□□□□ -2.44
APQ12YIL040W RPL5P26321 297 aaKnown RBP-0.17□□□□□ -2.44
APQ12YIL040W BIG1P38813 335 aa-0.17□□□□□ -2.44
APQ12YIL040W CDC40P40968 455 aaPredicted RBP-0.17□□□□□ -2.44
APQ12YIL040W JHD2P47156 728 aaPredicted RBP-0.17□□□□□ -2.44
APQ12YIL040W RPL9BP51401 191 aaKnown RBP-0.17□□□□□ -2.44
APQ12YIL040W YGL185CP53100 379 aa-0.17□□□□□ -2.44
APQ12YIL040W LCL2Q08045 131 aa-0.17□□□□□ -2.44
APQ12YIL040W YOL160WQ08321 113 aa-0.17□□□□□ -2.44
APQ12YIL040W MSA1Q08471 629 aa-0.17□□□□□ -2.44
APQ12YIL040W SIA1Q12212 622 aa-0.17□□□□□ -2.44
APQ12YIL040W MSW1P04803 379 aa-0.18□□□□□ -2.44
APQ12YIL040W POT1P27796 417 aaKnown RBP RIP-Chip data-0.18□□□□□ -2.44not detected
APQ12YIL040W LAS1P36146 502 aaPredicted RBP-0.18□□□□□ -2.44
APQ12YIL040W SOK1P40317 901 aa-0.18□□□□□ -2.44
APQ12YIL040W AIM20P40451 204 aa-0.18□□□□□ -2.44
APQ12YIL040W PDR16P53860 351 aaKnown RBP-0.18□□□□□ -2.44
APQ12YIL040W SWS2P53937 143 aa-0.18□□□□□ -2.44
APQ12YIL040W PML1Q07930 204 aaPredicted RBP-0.18□□□□□ -2.44
APQ12YIL040W POM33Q12164 279 aa-0.18□□□□□ -2.44
APQ12YIL040W YNL146C-AQ3E7Z1 64 aa-0.18□□□□□ -2.44
APQ12YIL040W ACC1Q00955 2233 aaKnown RBP-0.18□□□□□ -2.44
APQ12YIL040W YLR462WO13556 202 aa-0.19□□□□□ -2.44
APQ12YIL040W ILV1P00927 576 aaKnown RBP-0.19□□□□□ -2.44
APQ12YIL040W CAR2P07991 424 aaKnown RBP-0.19□□□□□ -2.44
APQ12YIL040W HEK2P38199 381 aaKnown RBP RIP-Chip data-0.19□□□□□ -2.44not detected
APQ12YIL040W YEL075CP39972 122 aa-0.19□□□□□ -2.44
APQ12YIL040W YER189WP40104 122 aa-0.19□□□□□ -2.44
APQ12YIL040W TIR3P40552 269 aa-0.19□□□□□ -2.44
APQ12YIL040W AGP3P43548 558 aa-0.19□□□□□ -2.44
APQ12YIL040W YGL034CP53186 121 aa-0.19□□□□□ -2.44
APQ12YIL040W SPP2Q02521 185 aa-0.19□□□□□ -2.44
APQ12YIL040W SFH1Q06168 426 aa-0.19□□□□□ -2.44
APQ12YIL040W GPN3Q06543 272 aa-0.19□□□□□ -2.44
APQ12YIL040W HEM25Q07534 307 aa-0.19□□□□□ -2.44
APQ12YIL040W RRS1Q08746 203 aaKnown RBP-0.19□□□□□ -2.44
APQ12YIL040W PSY3Q12318 242 aa-0.19□□□□□ -2.44
APQ12YIL040W MRPL23Q12487 163 aaPredicted RBP-0.19□□□□□ -2.44
APQ12YIL040W YBL008W-AQ3E821 79 aa-0.19□□□□□ -2.44
APQ12YIL040W RPP0P05317 312 aaKnown RBP-0.2□□□□□ -2.44
APQ12YIL040W ICL1P28240 557 aaPredicted RBP-0.2□□□□□ -2.44
APQ12YIL040W FZF1P32805 299 aa-0.2□□□□□ -2.44
APQ12YIL040W APE4P38821 490 aa-0.2□□□□□ -2.44
APQ12YIL040W TDA11P38854 504 aa-0.2□□□□□ -2.44
APQ12YIL040W MNN9P39107 395 aaKnown RBP-0.2□□□□□ -2.44
APQ12YIL040W RPL33BP41056 107 aaKnown RBP-0.2□□□□□ -2.44
APQ12YIL040W RIB4P50861 169 aaPredicted RBP-0.2□□□□□ -2.44
APQ12YIL040W BOL2P53082 120 aa-0.2□□□□□ -2.44
APQ12YIL040W TIM21P53220 239 aa-0.2□□□□□ -2.44
APQ12YIL040W MPP6P53725 186 aaPredicted RBP-0.2□□□□□ -2.44
APQ12YIL040W VBA1Q04301 562 aa-0.2□□□□□ -2.44
APQ12YIL040W FAR8Q05040 523 aa-0.2□□□□□ -2.44
APQ12YIL040W ANT1Q06497 328 aa-0.2□□□□□ -2.44
APQ12YIL040W YLR030WQ07967 263 aa-0.2□□□□□ -2.44
APQ12YIL040W CDC37P06101 506 aaKnown RBP-0.21□□□□□ -2.44
APQ12YIL040W YHR212W-AP0CX91 67 aa-0.21□□□□□ -2.44
APQ12YIL040W MEI4P29467 408 aa-0.21□□□□□ -2.44
APQ12YIL040W MSA2P36157 363 aa-0.21□□□□□ -2.44
APQ12YIL040W TVP38P36164 337 aa-0.21□□□□□ -2.44
APQ12YIL040W GAA1P39012 614 aa-0.21□□□□□ -2.44
APQ12YIL040W YFL065CP43539 102 aa-0.21□□□□□ -2.44
APQ12YIL040W LOH1P47055 219 aa-0.21□□□□□ -2.44
APQ12YIL040W CDC14Q00684 551 aa-0.21□□□□□ -2.44
APQ12YIL040W YLR179CQ06252 201 aaKnown RBP-0.21□□□□□ -2.44
APQ12YIL040W BER1Q06688 274 aaKnown RBP-0.21□□□□□ -2.44
APQ12YIL040W TPO4Q12256 659 aa-0.21□□□□□ -2.44
APQ12YIL040W SSA3P09435 649 aaKnown RBP-0.22□□□□□ -2.44
APQ12YIL040W SNA3P14359 133 aa-0.22□□□□□ -2.44
APQ12YIL040W PET18P25362 215 aa-0.22□□□□□ -2.44
APQ12YIL040W ERG24P32462 438 aaKnown RBP-0.22□□□□□ -2.44
APQ12YIL040W SRY1P36007 326 aa-0.22□□□□□ -2.44
APQ12YIL040W FZO1P38297 855 aa-0.22□□□□□ -2.44
APQ12YIL040W END3P39013 349 aa-0.22□□□□□ -2.44
APQ12YIL040W YNL217WP40152 326 aa-0.22□□□□□ -2.44
APQ12YIL040W NAS2P40555 220 aa-0.22□□□□□ -2.44
APQ12YIL040W YGL159WP53110 370 aa-0.22□□□□□ -2.44
APQ12YIL040W GTR2P53290 341 aa-0.22□□□□□ -2.44
APQ12YIL040W CPD1P53314 239 aa-0.22□□□□□ -2.44
APQ12YIL040W MNT4P53745 580 aa-0.22□□□□□ -2.44
APQ12YIL040W CUS2P53830 285 aaPredicted RBP-0.22□□□□□ -2.44
APQ12YIL040W PER33Q12144 273 aa-0.22□□□□□ -2.44
APQ12YIL040W SWI1P09547 1314 aa-0.22□□□□□ -2.44
APQ12YIL040W RPL27BP0C2H7 136 aaKnown RBP-0.23□□□□□ -2.45
APQ12YIL040W POF1P25576 258 aa-0.23□□□□□ -2.45
APQ12YIL040W SMI1P32566 505 aa-0.23□□□□□ -2.45
APQ12YIL040W HIS2P38635 335 aa-0.23□□□□□ -2.45
APQ12YIL040W RRF1P38771 230 aa-0.23□□□□□ -2.45
APQ12YIL040W FIS1P40515 155 aa-0.23□□□□□ -2.45
APQ12YIL040W YAE1P47118 141 aaPredicted RBP-0.23□□□□□ -2.45
APQ12YIL040W YLR297WQ05899 129 aa-0.23□□□□□ -2.45
APQ12YIL040W ATG39Q06159 398 aa-0.23□□□□□ -2.45
APQ12YIL040W YDL180WQ12301 547 aa-0.23□□□□□ -2.45
APQ12YIL040W YHR139C-AO13536 103 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms