RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C YNL040WP53960 456 aaPredicted RBP2.44□□□□□ -2.02
TCD1YHR003C ASI3P53983 676 aa2.44□□□□□ -2.02
TCD1YHR003C YLR460CP54007 376 aa2.44□□□□□ -2.02
TCD1YHR003C YDC1Q02896 317 aa2.44□□□□□ -2.02
TCD1YHR003C RNY1Q02933 434 aaKnown RBP2.44□□□□□ -2.02
TCD1YHR003C TRM82Q03774 444 aa2.44□□□□□ -2.02
TCD1YHR003C TAZ1Q06510 381 aa2.44□□□□□ -2.02
TCD1YHR003C MRX9Q07349 420 aaKnown RBP2.44□□□□□ -2.02
TCD1YHR003C DTD1Q07648 150 aaKnown RBP2.44□□□□□ -2.02
TCD1YHR003C YNG1Q08465 219 aa2.44□□□□□ -2.02
TCD1YHR003C YDR018CQ12185 396 aa2.44□□□□□ -2.02
TCD1YHR003C YOR114WQ12219 294 aa2.44□□□□□ -2.02
TCD1YHR003C WTM1Q12363 437 aaKnown RBP2.44□□□□□ -2.02
TCD1YHR003C UBR2Q07963 1872 aa2.43□□□□□ -2.02
TCD1YHR003C RPS3P05750 240 aaKnown RBP2.43□□□□□ -2.02
TCD1YHR003C PUT1P09368 476 aa2.43□□□□□ -2.02
TCD1YHR003C CHA1P25379 360 aaKnown RBP2.43□□□□□ -2.02
TCD1YHR003C LDB16P25587 256 aa2.43□□□□□ -2.02
TCD1YHR003C BMH1P29311 267 aaKnown RBP2.43□□□□□ -2.02
TCD1YHR003C TRR1P29509 319 aaKnown RBP2.43□□□□□ -2.02
TCD1YHR003C DEP1P31385 405 aa2.43□□□□□ -2.02
TCD1YHR003C SRP102P36057 244 aaPredicted RBP2.43□□□□□ -2.02
TCD1YHR003C YCR087C-AP37263 153 aa2.43□□□□□ -2.02
TCD1YHR003C YBR137WP38276 179 aa2.43□□□□□ -2.02
TCD1YHR003C KRE29P40026 464 aa2.43□□□□□ -2.02
TCD1YHR003C COG3P40094 801 aa2.43□□□□□ -2.02
TCD1YHR003C YNL320WP42840 284 aa2.43□□□□□ -2.02
TCD1YHR003C CIN2P46670 268 aa2.43□□□□□ -2.02
TCD1YHR003C NBP35P52920 328 aa2.43□□□□□ -2.02
TCD1YHR003C YPS5P53057 165 aa2.43□□□□□ -2.02
TCD1YHR003C ALG13P53178 202 aa2.43□□□□□ -2.02
TCD1YHR003C PEX31P53203 462 aa2.43□□□□□ -2.02
TCD1YHR003C FYV6P53913 173 aa2.43□□□□□ -2.02
TCD1YHR003C SNO1Q03144 224 aa2.43□□□□□ -2.02
TCD1YHR003C VPS60Q03390 229 aa2.43□□□□□ -2.02
TCD1YHR003C YPL199CQ08954 240 aa2.43□□□□□ -2.02
TCD1YHR003C MMT2Q08970 484 aa2.43□□□□□ -2.02
TCD1YHR003C YDL109CQ12103 647 aa2.43□□□□□ -2.02
TCD1YHR003C NSL1Q12143 216 aa2.43□□□□□ -2.02
TCD1YHR003C FRE8Q12209 686 aa2.43□□□□□ -2.02
TCD1YHR003C FOL3Q12676 427 aaPredicted RBP2.43□□□□□ -2.02
TCD1YHR003C YER078W-AQ3E7A2 54 aa2.43□□□□□ -2.02
TCD1YHR003C YAL064W-BO13512 126 aa2.42□□□□□ -2.02
TCD1YHR003C PET494P07390 489 aaPredicted RBP2.42□□□□□ -2.02
TCD1YHR003C SPT15P13393 240 aaKnown RBP2.42□□□□□ -2.02
TCD1YHR003C CPR1P14832 162 aaKnown RBP2.42□□□□□ -2.02
TCD1YHR003C SEN2P16658 377 aa2.42□□□□□ -2.02
TCD1YHR003C SAM2P19358 384 aaKnown RBP2.42□□□□□ -2.02
TCD1YHR003C IFM1P25038 676 aa2.42□□□□□ -2.02
TCD1YHR003C PMT2P31382 759 aa2.42□□□□□ -2.02
TCD1YHR003C AEP1P32493 518 aa2.42□□□□□ -2.02
TCD1YHR003C CAF4P36130 643 aa2.42□□□□□ -2.02
TCD1YHR003C MIX23P38162 196 aa2.42□□□□□ -2.02
TCD1YHR003C DER1P38307 211 aa2.42□□□□□ -2.02
TCD1YHR003C ATG12P38316 186 aa2.42□□□□□ -2.02
TCD1YHR003C SOK1P40317 901 aa2.42□□□□□ -2.02
TCD1YHR003C MCM22P47167 239 aa2.42□□□□□ -2.02
TCD1YHR003C BRR6P53062 197 aa2.42□□□□□ -2.02
TCD1YHR003C MMS2P53152 137 aa2.42□□□□□ -2.02
TCD1YHR003C IBD2P53892 351 aa2.42□□□□□ -2.02
TCD1YHR003C SUR7P54003 302 aa2.42□□□□□ -2.02
TCD1YHR003C YLR152CP54072 576 aa2.42□□□□□ -2.02
TCD1YHR003C YET2Q04210 160 aa2.42□□□□□ -2.02
TCD1YHR003C PEX30Q06169 523 aa2.42□□□□□ -2.02
TCD1YHR003C YDL114WQ07530 308 aa2.42□□□□□ -2.02
TCD1YHR003C COQ10Q08058 207 aa2.42□□□□□ -2.02
TCD1YHR003C RRS1Q08746 203 aaKnown RBP2.42□□□□□ -2.02
TCD1YHR003C RFM1Q12192 310 aa2.42□□□□□ -2.02
TCD1YHR003C YGK3Q12222 375 aaPredicted RBP2.42□□□□□ -2.02
TCD1YHR003C TPO4Q12256 659 aa2.42□□□□□ -2.02
TCD1YHR003C YCR024C-BQ3E7Z8 88 aa2.42□□□□□ -2.02
TCD1YHR003C HEM4P06174 275 aa2.41□□□□□ -2.02
TCD1YHR003C PIS1P06197 220 aaKnown RBP2.41□□□□□ -2.02
TCD1YHR003C MET2P08465 486 aa2.41□□□□□ -2.02
TCD1YHR003C RPL23AP0CX41 137 aaKnown RBP2.41□□□□□ -2.02
TCD1YHR003C RPL23BP0CX42 137 aaKnown RBP2.41□□□□□ -2.02
TCD1YHR003C ERD1P16151 362 aa2.41□□□□□ -2.02
TCD1YHR003C PHO80P20052 293 aa2.41□□□□□ -2.02
TCD1YHR003C GIT1P25346 518 aa2.41□□□□□ -2.02
TCD1YHR003C RPL16AP26784 199 aaKnown RBP2.41□□□□□ -2.02
TCD1YHR003C INO2P26798 304 aa2.41□□□□□ -2.02
TCD1YHR003C SGE1P33335 543 aa2.41□□□□□ -2.02
TCD1YHR003C KTI12P34253 313 aaKnown RBP2.41□□□□□ -2.02
TCD1YHR003C ANR2P36090 516 aaPredicted RBP2.41□□□□□ -2.02
TCD1YHR003C MRPL28P36527 147 aa2.41□□□□□ -2.02
TCD1YHR003C HMT1P38074 348 aa2.41□□□□□ -2.02
TCD1YHR003C RCK1P38622 512 aa2.41□□□□□ -2.02
TCD1YHR003C GRE3P38715 327 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
TCD1YHR003C GOS1P38736 223 aa2.41□□□□□ -2.02
TCD1YHR003C COX14P39103 70 aa2.41□□□□□ -2.02
TCD1YHR003C ICE2P40499 491 aa2.41□□□□□ -2.02
TCD1YHR003C SER33P40510 469 aa2.41□□□□□ -2.02
TCD1YHR003C YJL016WP47072 561 aa2.41□□□□□ -2.02
TCD1YHR003C YJR056CP47115 236 aa2.41□□□□□ -2.02
TCD1YHR003C MOG1P47123 218 aa2.41□□□□□ -2.02
TCD1YHR003C PDR17P53844 350 aa2.41□□□□□ -2.02
TCD1YHR003C NRK1P53915 240 aa2.41□□□□□ -2.02
TCD1YHR003C PRP38Q00723 242 aaPredicted RBP2.41□□□□□ -2.02
TCD1YHR003C NUP49Q02199 472 aa2.41□□□□□ -2.02
TCD1YHR003C PIR3Q03180 325 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms