RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W OST2P46964 130 aa0.62□□□□□ -2.31
CUL3YGR003W MRX5P47007 382 aa0.62□□□□□ -2.31
CUL3YGR003W YLR030WQ07967 263 aa0.62□□□□□ -2.31
CUL3YGR003W SSK22P25390 1331 aaPredicted RBP0.62□□□□□ -2.31
CUL3YGR003W Q0255P03881 472 aa0.62□□□□□ -2.31
CUL3YGR003W CWP1P28319 239 aa0.62□□□□□ -2.31
CUL3YGR003W SHC1P39000 512 aa0.62□□□□□ -2.31
CUL3YGR003W DDI1P40087 428 aa0.62□□□□□ -2.31
CUL3YGR003W AYR1P40471 297 aa0.62□□□□□ -2.31
CUL3YGR003W YAR1P46683 200 aa0.62□□□□□ -2.31
CUL3YGR003W GMC2Q06201 188 aa0.62□□□□□ -2.31
CUL3YGR003W SLD7Q08457 257 aa0.62□□□□□ -2.31
CUL3YGR003W YHR139C-AO13536 103 aa0.61□□□□□ -2.31
CUL3YGR003W CDC7P06243 507 aa0.61□□□□□ -2.31
CUL3YGR003W SCL1P21243 252 aaKnown RBP0.61□□□□□ -2.31
CUL3YGR003W DAL80P26343 269 aa0.61□□□□□ -2.31
CUL3YGR003W RPT5P33297 434 aaKnown RBP0.61□□□□□ -2.31
CUL3YGR003W JEN1P36035 616 aa0.61□□□□□ -2.31
CUL3YGR003W GOS1P38736 223 aa0.61□□□□□ -2.31
CUL3YGR003W GLE2P40066 365 aa0.61□□□□□ -2.31
CUL3YGR003W YJR012CP47087 207 aa0.61□□□□□ -2.31
CUL3YGR003W EGD1Q02642 157 aaKnown RBP0.61□□□□□ -2.31
CUL3YGR003W MSA1Q08471 629 aa0.61□□□□□ -2.31
CUL3YGR003W UBR2Q07963 1872 aa0.61□□□□□ -2.31
CUL3YGR003W YHR125WP38831 101 aa0.61□□□□□ -2.31
CUL3YGR003W PEX18P38855 283 aa0.61□□□□□ -2.31
CUL3YGR003W KAP114P53067 1004 aa0.61□□□□□ -2.31
CUL3YGR003W YGL159WP53110 370 aa0.61□□□□□ -2.31
CUL3YGR003W HIS1P00498 297 aaKnown RBP0.6□□□□□ -2.31
CUL3YGR003W PUT1P09368 476 aa0.6□□□□□ -2.31
CUL3YGR003W HOM6P31116 359 aaKnown RBP0.6□□□□□ -2.31
CUL3YGR003W MRPL37P36532 105 aa0.6□□□□□ -2.31
CUL3YGR003W PRS2P38620 318 aaKnown RBP0.6□□□□□ -2.31
CUL3YGR003W MRPS8Q03799 155 aa0.6□□□□□ -2.31
CUL3YGR003W MHT1Q12525 324 aa0.6□□□□□ -2.31
CUL3YGR003W RAD3P06839 778 aa0.6□□□□□ -2.31
CUL3YGR003W YKR104WP0CE69 306 aa0.6□□□□□ -2.31
CUL3YGR003W RPS5P26783 225 aaKnown RBP0.6□□□□□ -2.31
CUL3YGR003W DOG1P38774 246 aa0.6□□□□□ -2.31
CUL3YGR003W BIG1P38813 335 aa0.6□□□□□ -2.31
CUL3YGR003W MEP1P40260 492 aa0.6□□□□□ -2.31
CUL3YGR003W MRH4P53166 561 aa0.6□□□□□ -2.31
CUL3YGR003W SNZ2P53824 298 aa0.6□□□□□ -2.31
CUL3YGR003W AKR2Q12013 749 aa0.6□□□□□ -2.31
CUL3YGR003W SIR4P11978 1358 aa0.6□□□□□ -2.31
CUL3YGR003W PEX4P29340 183 aa0.59□□□□□ -2.31
CUL3YGR003W ARC15P40518 154 aaRIP-Chip data0.59□□□□□ -2.31 RIP-Chip
CUL3YGR003W RPL10P41805 221 aaKnown RBP0.59□□□□□ -2.31
CUL3YGR003W YNL046WP53956 172 aa0.59□□□□□ -2.31
CUL3YGR003W YPR147CQ06522 304 aaKnown RBP0.59□□□□□ -2.31
CUL3YGR003W YOR186WQ08560 144 aa0.59□□□□□ -2.31
CUL3YGR003W ATO3Q12359 275 aa0.59□□□□□ -2.31
CUL3YGR003W RRP36Q12481 300 aaPredicted RBP0.59□□□□□ -2.31
CUL3YGR003W SNF8Q12483 233 aa0.59□□□□□ -2.31
CUL3YGR003W YLR462WO13556 202 aa0.58□□□□□ -2.32
CUL3YGR003W TCP1P12612 559 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W ERG24P32462 438 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W YEL075CP39972 122 aa0.58□□□□□ -2.32
CUL3YGR003W THO1P40040 218 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W YER189WP40104 122 aa0.58□□□□□ -2.32
CUL3YGR003W JHD2P47156 728 aaPredicted RBP0.58□□□□□ -2.32
CUL3YGR003W ALG11P53954 548 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W CYT2Q00873 224 aa0.58□□□□□ -2.32
CUL3YGR003W BOL1Q3E793 110 aa0.58□□□□□ -2.32
CUL3YGR003W YIL002W-AQ3E7Z5 69 aa0.58□□□□□ -2.32
CUL3YGR003W MSF1P08425 469 aa0.58□□□□□ -2.32
CUL3YGR003W OM45P16547 393 aa0.58□□□□□ -2.32
CUL3YGR003W GRX2P17695 143 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W MRX3P38172 270 aa0.58□□□□□ -2.32
CUL3YGR003W COS8P38723 381 aa0.58□□□□□ -2.32
CUL3YGR003W YHR180WP38868 163 aa0.58□□□□□ -2.32
CUL3YGR003W YHB1P39676 399 aaKnown RBP0.58□□□□□ -2.32
CUL3YGR003W RPA43P46669 326 aa0.58□□□□□ -2.32
CUL3YGR003W DAD3P69850 94 aa0.58□□□□□ -2.32
CUL3YGR003W SPG4Q04438 115 aa0.58□□□□□ -2.32
CUL3YGR003W YDR124WQ04608 324 aa0.58□□□□□ -2.32
CUL3YGR003W YPR172WQ06608 200 aa0.58□□□□□ -2.32
CUL3YGR003W DDI2P0CH63 225 aa0.57□□□□□ -2.32
CUL3YGR003W DDI3P0CH64 225 aa0.57□□□□□ -2.32
CUL3YGR003W DSF1P0CX08 502 aa0.57□□□□□ -2.32
CUL3YGR003W YNR073CP0CX09 502 aa0.57□□□□□ -2.32
CUL3YGR003W VPS3P23643 1011 aa0.57□□□□□ -2.32
CUL3YGR003W YER135CP40082 130 aa0.57□□□□□ -2.32
CUL3YGR003W PEP8P40335 379 aa0.57□□□□□ -2.32
CUL3YGR003W BMT5P40493 336 aa0.57□□□□□ -2.32
CUL3YGR003W ARR2Q06597 130 aa0.57□□□□□ -2.32
CUL3YGR003W SDO1Q07953 250 aaKnown RBP0.57□□□□□ -2.32
CUL3YGR003W RRP40Q08285 240 aaKnown RBP0.57□□□□□ -2.32
CUL3YGR003W SYC1Q08553 188 aaPredicted RBP0.57□□□□□ -2.32
CUL3YGR003W YOR029WQ12243 111 aa0.57□□□□□ -2.32
CUL3YGR003W FBA1P14540 359 aaKnown RBP0.57□□□□□ -2.32
CUL3YGR003W EBP2P36049 427 aaKnown RBP0.57□□□□□ -2.32
CUL3YGR003W PHO88P38264 188 aaPredicted RBP0.57□□□□□ -2.32
CUL3YGR003W SSH1P38353 490 aaKnown RBP0.57□□□□□ -2.32
CUL3YGR003W YHR022CP38763 256 aa0.57□□□□□ -2.32
CUL3YGR003W CIS3P47001 227 aa0.57□□□□□ -2.32
CUL3YGR003W GTR2P53290 341 aa0.57□□□□□ -2.32
CUL3YGR003W ASI3P53983 676 aa0.57□□□□□ -2.32
CUL3YGR003W GOT1Q03554 138 aa0.57□□□□□ -2.32
CUL3YGR003W FAR8Q05040 523 aa0.57□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms