RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C POS5Q06892 414 aa3.2□□□□□ -1.9
OTU1YFL044C SNA4Q07549 140 aa3.2□□□□□ -1.9
OTU1YFL044C GAT3Q07928 141 aa3.2□□□□□ -1.9
OTU1YFL044C MSA1Q08471 629 aa3.2□□□□□ -1.9
OTU1YFL044C MUM3Q08750 479 aa3.2□□□□□ -1.9
OTU1YFL044C YLR112WQ12130 139 aa3.2□□□□□ -1.9
OTU1YFL044C YDL199CQ12407 687 aa3.2□□□□□ -1.9
OTU1YFL044C TFB5Q3E7C1 72 aaPredicted RBP3.2□□□□□ -1.9
OTU1YFL044C MSI1P13712 422 aa3.19□□□□□ -1.9
OTU1YFL044C APA2P22108 325 aa3.19□□□□□ -1.9
OTU1YFL044C CDC10P25342 322 aaKnown RBP3.19□□□□□ -1.9
OTU1YFL044C GIT1P25346 518 aa3.19□□□□□ -1.9
OTU1YFL044C YCR100CP25606 316 aa3.19□□□□□ -1.9
OTU1YFL044C ASF2P32448 525 aaPredicted RBP3.19□□□□□ -1.9
OTU1YFL044C SPT10P35208 640 aa3.19□□□□□ -1.9
OTU1YFL044C SOR1P35497 357 aaKnown RBP3.19□□□□□ -1.9
OTU1YFL044C ISC1P40015 477 aaKnown RBP3.19□□□□□ -1.9
OTU1YFL044C MPM1P40364 252 aa3.19□□□□□ -1.9
OTU1YFL044C SAS2P40963 338 aa3.19□□□□□ -1.9
OTU1YFL044C GLR1P41921 483 aaKnown RBP3.19□□□□□ -1.9
OTU1YFL044C YMR279CQ03263 540 aa3.19□□□□□ -1.9
OTU1YFL044C YDR387CQ04162 555 aa3.19□□□□□ -1.9
OTU1YFL044C YDR391CQ04170 232 aa3.19□□□□□ -1.9
OTU1YFL044C TAZ1Q06510 381 aa3.19□□□□□ -1.9
OTU1YFL044C SOR2Q07786 357 aa3.19□□□□□ -1.9
OTU1YFL044C HMS1Q12398 434 aa3.19□□□□□ -1.9
OTU1YFL044C MRX4Q12467 430 aa3.19□□□□□ -1.9
OTU1YFL044C YKL068W-AQ3E826 78 aa3.19□□□□□ -1.9
OTU1YFL044C DPM1P14020 267 aaKnown RBP3.18□□□□□ -1.9
OTU1YFL044C HNM1P19807 563 aa3.18□□□□□ -1.9
OTU1YFL044C DBF2P22204 572 aa3.18□□□□□ -1.9
OTU1YFL044C NUF2P33895 451 aa3.18□□□□□ -1.9
OTU1YFL044C RIB1P38066 345 aa3.18□□□□□ -1.9
OTU1YFL044C GDT1P38301 280 aaPredicted RBP3.18□□□□□ -1.9
OTU1YFL044C MED8P38304 223 aa3.18□□□□□ -1.9
OTU1YFL044C YHR218WP38899 603 aa3.18□□□□□ -1.9
OTU1YFL044C TRS85P46944 698 aa3.18□□□□□ -1.9
OTU1YFL044C BAT2P47176 376 aaKnown RBP3.18□□□□□ -1.9
OTU1YFL044C UBC13P52490 153 aa3.18□□□□□ -1.9
OTU1YFL044C SYF2P53277 215 aaPredicted RBP3.18□□□□□ -1.9
OTU1YFL044C YNR062CP53748 327 aa3.18□□□□□ -1.9
OTU1YFL044C YIF1P53845 314 aaKnown RBP3.18□□□□□ -1.9
OTU1YFL044C YNL234WP53857 426 aa3.18□□□□□ -1.9
OTU1YFL044C YNL181WP53878 407 aa3.18□□□□□ -1.9
OTU1YFL044C ABZ2Q03266 374 aa3.18□□□□□ -1.9
OTU1YFL044C CAC2Q04199 468 aa3.18□□□□□ -1.9
OTU1YFL044C CTS2Q06350 511 aa3.18□□□□□ -1.9
OTU1YFL044C RRP9Q06506 573 aaKnown RBP3.18□□□□□ -1.9
OTU1YFL044C SSK1Q07084 712 aa3.18□□□□□ -1.9
OTU1YFL044C YFH1Q07540 174 aa3.18□□□□□ -1.9
OTU1YFL044C MIM1Q08176 113 aa3.18□□□□□ -1.9
OTU1YFL044C RNH203Q12338 110 aa3.18□□□□□ -1.9
OTU1YFL044C WTM1Q12363 437 aaKnown RBP3.18□□□□□ -1.9
OTU1YFL044C MHF2Q3E829 80 aa3.18□□□□□ -1.9
OTU1YFL044C RAD7P06779 565 aa3.17□□□□□ -1.9
OTU1YFL044C RPC40P07703 335 aaKnown RBP3.17□□□□□ -1.9
OTU1YFL044C YOL162WP0CF19 215 aa3.17□□□□□ -1.9
OTU1YFL044C TAL1P15019 335 aaKnown RBP3.17□□□□□ -1.9
OTU1YFL044C IDH1P28834 360 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
OTU1YFL044C VMA11P32842 164 aa3.17□□□□□ -1.9
OTU1YFL044C PPQ1P32945 549 aa3.17□□□□□ -1.9
OTU1YFL044C PAD1P33751 242 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
OTU1YFL044C YER121WP40076 114 aa3.17□□□□□ -1.9
OTU1YFL044C HPM1P40481 377 aa3.17□□□□□ -1.9
OTU1YFL044C YJR011CP47086 261 aaPredicted RBP3.17□□□□□ -1.9
OTU1YFL044C TPS1Q00764 495 aaKnown RBP3.17□□□□□ -1.9
OTU1YFL044C YDR102CQ03864 110 aa3.17□□□□□ -1.9
OTU1YFL044C PHO92Q06390 306 aa3.17□□□□□ -1.9
OTU1YFL044C NDL1Q06568 189 aa3.17□□□□□ -1.9
OTU1YFL044C GSH2Q08220 491 aa3.17□□□□□ -1.9
OTU1YFL044C ATX2Q12067 313 aa3.17□□□□□ -1.9
OTU1YFL044C SCEIP03882 235 aa3.16□□□□□ -1.9
OTU1YFL044C YER190C-BP0CX94 160 aa3.16□□□□□ -1.9
OTU1YFL044C YEL077W-AP0CX95 160 aa3.16□□□□□ -1.9
OTU1YFL044C YGR296C-BP0CX96 160 aa3.16□□□□□ -1.9
OTU1YFL044C YPL283W-BP0CX97 160 aa3.16□□□□□ -1.9
OTU1YFL044C YPR204C-AP0CX98 160 aa3.16□□□□□ -1.9
OTU1YFL044C PET9P18239 318 aaKnown RBP3.16□□□□□ -1.9
OTU1YFL044C CMK2P22517 447 aa3.16□□□□□ -1.9
OTU1YFL044C PPA2P28239 310 aa3.16□□□□□ -1.9
OTU1YFL044C CLG1P35190 452 aa3.16□□□□□ -1.9
OTU1YFL044C EFM3P47163 339 aa3.16□□□□□ -1.9
OTU1YFL044C MIG2P53035 382 aa3.16□□□□□ -1.9
OTU1YFL044C BRR6P53062 197 aa3.16□□□□□ -1.9
OTU1YFL044C YGL101WP53144 215 aa3.16□□□□□ -1.9
OTU1YFL044C YNL033WP53964 284 aa3.16□□□□□ -1.9
OTU1YFL044C YNL019CP53975 284 aa3.16□□□□□ -1.9
OTU1YFL044C RRN5Q02983 363 aa3.16□□□□□ -1.9
OTU1YFL044C TLG1Q03322 224 aa3.16□□□□□ -1.9
OTU1YFL044C IZH1Q03419 316 aa3.16□□□□□ -1.9
OTU1YFL044C DML1Q03652 475 aa3.16□□□□□ -1.9
OTU1YFL044C RIM9Q04734 239 aa3.16□□□□□ -1.9
OTU1YFL044C HRT1Q08273 121 aa3.16□□□□□ -1.9
OTU1YFL044C SKI7Q08491 747 aaPredicted RBP3.16□□□□□ -1.9
OTU1YFL044C SNX3Q08826 162 aaKnown RBP3.16□□□□□ -1.9
OTU1YFL044C FRE8Q12209 686 aa3.16□□□□□ -1.9
OTU1YFL044C MCT1Q12283 360 aa3.16□□□□□ -1.9
OTU1YFL044C ILV5P06168 395 aaKnown RBP3.15□□□□□ -1.91
OTU1YFL044C PEX3P28795 441 aa3.15□□□□□ -1.91
OTU1YFL044C REC114P32841 428 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms