RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	RPS18B	P0CX56	146 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	PMR1	P13586	950 aa		0.75	□□□□□ -2.29
UBP3	YER151C	MSI1	P13712	422 aa		0.75	□□□□□ -2.29
UBP3	YER151C	DBP3	P20447	523 aa	Known RBP	0.75	□□□□□ -2.29
UBP3	YER151C	ERG9	P29704	444 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SUR1	P33300	382 aa		0.75	□□□□□ -2.29
UBP3	YER151C	NTC20	P38302	140 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	MBB1	P39534	108 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SHO1	P40073	367 aa		0.75	□□□□□ -2.29
UBP3	YER151C	EGT2	P42835	1041 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SNX4	P47057	423 aa		0.75	□□□□□ -2.29
UBP3	YER151C	STE24	P47154	453 aa		0.75	□□□□□ -2.29
UBP3	YER151C	CRH1	P53301	507 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SED1	Q01589	338 aa		0.75	□□□□□ -2.29
UBP3	YER151C	SWP1	Q02795	286 aa		0.75	□□□□□ -2.29
UBP3	YER151C	YPR174C	Q06616	221 aa	Predicted RBP	0.75	□□□□□ -2.29
UBP3	YER151C	IRC19	Q07843	230 aa		0.75	□□□□□ -2.29
UBP3	YER151C	MF(ALPHA)1	P01149	165 aa		0.74	□□□□□ -2.29
UBP3	YER151C	SPS2	P08459	502 aa		0.74	□□□□□ -2.29
UBP3	YER151C	CSM1	P25651	190 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RPL5	P26321	297 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	IST2	P38250	946 aa		0.74	□□□□□ -2.29
UBP3	YER151C	PRS2	P38620	318 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	UTP25	P40498	721 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	YIL012W	P40551	113 aa		0.74	□□□□□ -2.29
UBP3	YER151C	AGX1	P43567	385 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RPA43	P46669	326 aa		0.74	□□□□□ -2.29
UBP3	YER151C	TOS2	P50078	622 aa		0.74	□□□□□ -2.29
UBP3	YER151C	EMC4	P53073	190 aa		0.74	□□□□□ -2.29
UBP3	YER151C	YGL114W	P53134	725 aa		0.74	□□□□□ -2.29
UBP3	YER151C	COG7	P53195	279 aa		0.74	□□□□□ -2.29
UBP3	YER151C	FYV6	P53913	173 aa		0.74	□□□□□ -2.29
UBP3	YER151C	GPI17	Q04080	534 aa		0.74	□□□□□ -2.29
UBP3	YER151C	VPS38	Q05919	439 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RAF1	Q06891	181 aa		0.74	□□□□□ -2.29
UBP3	YER151C	SHS1	Q07657	551 aa		0.74	□□□□□ -2.29
UBP3	YER151C	THP1	Q08231	455 aa		0.74	□□□□□ -2.29
UBP3	YER151C	TMC1	Q08422	150 aa	Predicted RBP	0.74	□□□□□ -2.29
UBP3	YER151C	ERV2	Q12284	196 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RMD5	Q12508	421 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RPB4	P20433	221 aa	Predicted RBP	0.74	□□□□□ -2.29
UBP3	YER151C	YCR007C	P25354	239 aa		0.74	□□□□□ -2.29
UBP3	YER151C	COX13	P32799	129 aa		0.74	□□□□□ -2.29
UBP3	YER151C	YKR032W	P36127	104 aa		0.74	□□□□□ -2.29
UBP3	YER151C	CAF4	P36130	643 aa		0.74	□□□□□ -2.29
UBP3	YER151C	SIP18	P50263	79 aa		0.74	□□□□□ -2.29
UBP3	YER151C	MSO1	P53604	210 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	VPS75	P53853	264 aa		0.74	□□□□□ -2.29
UBP3	YER151C	LCL1	Q02786	101 aa		0.74	□□□□□ -2.29
UBP3	YER151C	OAZ1	Q02803	292 aa		0.74	□□□□□ -2.29
UBP3	YER151C	RCE1	Q03530	315 aa		0.74	□□□□□ -2.29
UBP3	YER151C	YDR239C	Q03780	787 aa		0.74	□□□□□ -2.29
UBP3	YER151C	EMI1	Q04406	187 aa		0.74	□□□□□ -2.29
UBP3	YER151C	YDR222W	Q04925	415 aa		0.74	□□□□□ -2.29
UBP3	YER151C	SML1	Q04964	104 aa		0.74	□□□□□ -2.29
UBP3	YER151C	ABP140	Q08641	628 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	FSF1	Q12029	327 aa	Known RBP	0.74	□□□□□ -2.29
UBP3	YER151C	ATO3	Q12359	275 aa		0.74	□□□□□ -2.29
UBP3	YER151C	TPK3	P05986	398 aa		0.73	□□□□□ -2.29
UBP3	YER151C	YER039C-A	P0CD97	72 aa		0.73	□□□□□ -2.29
UBP3	YER151C	YOL163W	P0CF20	169 aa		0.73	□□□□□ -2.29
UBP3	YER151C	PET54	P10834	293 aa		0.73	□□□□□ -2.29
UBP3	YER151C	TFS1	P14306	219 aa		0.73	□□□□□ -2.29
UBP3	YER151C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
UBP3	YER151C	DBF2	P22204	572 aa		0.73	□□□□□ -2.29
UBP3	YER151C	DAL80	P26343	269 aa		0.73	□□□□□ -2.29
UBP3	YER151C	PRR1	P28708	518 aa		0.73	□□□□□ -2.29
UBP3	YER151C	PEX4	P29340	183 aa		0.73	□□□□□ -2.29
UBP3	YER151C	MGM101	P32787	269 aa	Known RBP	0.73	□□□□□ -2.29
UBP3	YER151C	ZRT1	P32804	376 aa		0.73	□□□□□ -2.29
UBP3	YER151C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
UBP3	YER151C	NAT2	P37293	288 aa		0.73	□□□□□ -2.29
UBP3	YER151C	RRN10	P38204	145 aa		0.73	□□□□□ -2.29
UBP3	YER151C	SLM4	P38247	162 aa		0.73	□□□□□ -2.29
UBP3	YER151C	RRT13	P40042	185 aa		0.73	□□□□□ -2.29
UBP3	YER151C	RPL13B	P40212	199 aa	Known RBP	0.73	□□□□□ -2.29
UBP3	YER151C	PTR3	P43606	678 aa		0.73	□□□□□ -2.29
UBP3	YER151C	CIS3	P47001	227 aa		0.73	□□□□□ -2.29
UBP3	YER151C	SSU72	P53538	206 aa	Predicted RBP	0.73	□□□□□ -2.29
UBP3	YER151C	PGA2	P53903	129 aa		0.73	□□□□□ -2.29
UBP3	YER151C	CDC123	Q05791	360 aa		0.73	□□□□□ -2.29
UBP3	YER151C	ATG39	Q06159	398 aa		0.73	□□□□□ -2.29
UBP3	YER151C	PIN3	Q06449	215 aa		0.73	□□□□□ -2.29
UBP3	YER151C	SDO1	Q07953	250 aa	Known RBP	0.73	□□□□□ -2.29
UBP3	YER151C	YDL109C	Q12103	647 aa		0.73	□□□□□ -2.29
UBP3	YER151C	RPL13A	Q12690	199 aa	Predicted RBP	0.73	□□□□□ -2.29
UBP3	YER151C	ISN1	Q99312	450 aa		0.73	□□□□□ -2.29
UBP3	YER151C	HTB1	P02293	131 aa	Known RBP	0.73	□□□□□ -2.29
UBP3	YER151C	SGA1	P08019	549 aa		0.73	□□□□□ -2.29
UBP3	YER151C	SSC1	P0CS90	654 aa	Known RBP	0.73	□□□□□ -2.29
UBP3	YER151C	AUA1	P32450	94 aa		0.73	□□□□□ -2.29
UBP3	YER151C	NUP2	P32499	720 aa		0.73	□□□□□ -2.29
UBP3	YER151C	MED6	P38782	295 aa		0.73	□□□□□ -2.29
UBP3	YER151C	NSG1	P38837	291 aa		0.73	□□□□□ -2.29
UBP3	YER151C	CIN4	P39110	191 aa		0.73	□□□□□ -2.29
UBP3	YER151C	MIG3	P39943	394 aa		0.73	□□□□□ -2.29
UBP3	YER151C	MET28	P40573	187 aa		0.73	□□□□□ -2.29
UBP3	YER151C	FAR3	P46671	204 aa		0.73	□□□□□ -2.29
UBP3	YER151C	ATP22	P50273	684 aa	Predicted RBP	0.73	□□□□□ -2.29
UBP3	YER151C	BIO3	P50277	480 aa		0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms