RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NCE102Q12207 173 aaRIP-Chip data6.8□□□□□ -1.32not detected
SHC1YER096W IZH2Q12442 317 aa6.8□□□□□ -1.32
SHC1YER096W RAD52P06778 471 aaKnown RBP6.79□□□□□ -1.32
SHC1YER096W CHO1P08456 276 aa6.79□□□□□ -1.32
SHC1YER096W GCN3P14741 305 aa6.79□□□□□ -1.32
SHC1YER096W HXT2P23585 541 aa6.79□□□□□ -1.32
SHC1YER096W AFG1P32317 509 aa6.79□□□□□ -1.32
SHC1YER096W YER084WP40057 128 aa6.79□□□□□ -1.32
SHC1YER096W SYS1P41544 203 aa6.79□□□□□ -1.32
SHC1YER096W NGL2Q03264 515 aaKnown RBP6.79□□□□□ -1.32
SHC1YER096W TY1A-DR2Q03964 440 aaKnown RBP6.79□□□□□ -1.32
SHC1YER096W YLR283WQ05867 314 aa6.79□□□□□ -1.32
SHC1YER096W HEM4P06174 275 aa6.78□□□□□ -1.32
SHC1YER096W PHO2P07269 559 aa6.78□□□□□ -1.32
SHC1YER096W PPZ2P33329 710 aa6.78□□□□□ -1.32
SHC1YER096W UMP1P38293 148 aa6.78□□□□□ -1.32
SHC1YER096W GPP1P41277 250 aaKnown RBP6.78□□□□□ -1.32
SHC1YER096W TYW3P53177 273 aa6.78□□□□□ -1.32
SHC1YER096W SLI1P53304 468 aa6.78□□□□□ -1.32
SHC1YER096W NRK1P53915 240 aa6.78□□□□□ -1.32
SHC1YER096W RSM23Q01163 450 aa6.78□□□□□ -1.32
SHC1YER096W RAF1Q06891 181 aa6.78□□□□□ -1.32
SHC1YER096W FRE3Q08905 711 aa6.78□□□□□ -1.32
SHC1YER096W DSF1P0CX08 502 aa6.77□□□□□ -1.33
SHC1YER096W YNR073CP0CX09 502 aa6.77□□□□□ -1.33
SHC1YER096W MRT4P33201 236 aaKnown RBP6.77□□□□□ -1.33
SHC1YER096W YND1P40009 630 aa6.77□□□□□ -1.33
SHC1YER096W IDP2P41939 412 aa6.77□□□□□ -1.33
SHC1YER096W YFL051CP43552 160 aa6.77□□□□□ -1.33
SHC1YER096W YJL016WP47072 561 aa6.77□□□□□ -1.33
SHC1YER096W AIM25P47140 327 aa6.77□□□□□ -1.33
SHC1YER096W SRP1Q02821 542 aaKnown RBP6.77□□□□□ -1.33
SHC1YER096W RCE1Q03530 315 aa6.77□□□□□ -1.33
SHC1YER096W YLR031WQ07978 186 aa6.77□□□□□ -1.33
SHC1YER096W SCM3Q12334 223 aa6.77□□□□□ -1.33
SHC1YER096W NHP6BP11633 99 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W VMA5P31412 392 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W VAM7P32912 316 aa6.76□□□□□ -1.33
SHC1YER096W UTP30P36144 274 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W APL3P38065 1025 aa6.76□□□□□ -1.33
SHC1YER096W QDR1P40475 563 aa6.76□□□□□ -1.33
SHC1YER096W AVT7P40501 490 aa6.76□□□□□ -1.33
SHC1YER096W NSA1P53136 463 aaPredicted RBP6.76□□□□□ -1.33
SHC1YER096W DIG2Q03373 323 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W PRS5Q12265 496 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W WHI5Q12416 295 aa6.76□□□□□ -1.33
SHC1YER096W HUT1Q12520 339 aa6.76□□□□□ -1.33
SHC1YER096W TDH2P00358 332 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W NAM2P11325 894 aa6.76□□□□□ -1.33
SHC1YER096W URA6P15700 204 aa6.76□□□□□ -1.33
SHC1YER096W MAK32P23060 363 aa6.76□□□□□ -1.33
SHC1YER096W RNA14P25298 677 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W NAB2P32505 525 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SHC1YER096W MRPL3P36516 390 aa6.76□□□□□ -1.33
SHC1YER096W YBR096WP38256 230 aa6.76□□□□□ -1.33
SHC1YER096W XBP1P40489 647 aa6.76□□□□□ -1.33
SHC1YER096W OST1P41543 476 aaKnown RBP6.76□□□□□ -1.33
SHC1YER096W MOB2P43563 287 aa6.76□□□□□ -1.33
SHC1YER096W YNR048WP53740 393 aa6.76□□□□□ -1.33
SHC1YER096W RSC58Q07979 502 aa6.76□□□□□ -1.33
SHC1YER096W FIT3Q08907 204 aa6.76□□□□□ -1.33
SHC1YER096W YOR385WQ08909 290 aa6.76□□□□□ -1.33
SHC1YER096W ERP4Q12450 207 aa6.76□□□□□ -1.33
SHC1YER096W TDH3P00359 332 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SHC1YER096W RPL30P14120 105 aaKnown RBP6.75□□□□□ -1.33
SHC1YER096W ARO3P14843 370 aaKnown RBP6.75□□□□□ -1.33
SHC1YER096W CDC23P16522 626 aa6.75□□□□□ -1.33
SHC1YER096W FMT1P32785 401 aa6.75□□□□□ -1.33
SHC1YER096W MRPL27P36526 146 aaPredicted RBP6.75□□□□□ -1.33
SHC1YER096W MRPL36P36531 177 aa6.75□□□□□ -1.33
SHC1YER096W FIG1P38224 298 aa6.75□□□□□ -1.33
SHC1YER096W FLX1P40464 311 aa6.75□□□□□ -1.33
SHC1YER096W AVT4P50944 713 aa6.75□□□□□ -1.33
SHC1YER096W OKP1P53298 406 aa6.75□□□□□ -1.33
SHC1YER096W VBA1Q04301 562 aa6.75□□□□□ -1.33
SHC1YER096W SRL2Q12020 392 aa6.75□□□□□ -1.33
SHC1YER096W YLR125WQ12138 136 aa6.75□□□□□ -1.33
SHC1YER096W IPP1P00817 287 aaKnown RBP6.74□□□□□ -1.33
SHC1YER096W HNM1P19807 563 aa6.74□□□□□ -1.33
SHC1YER096W DEG1P31115 442 aaKnown RBP6.74□□□□□ -1.33
SHC1YER096W YBL010CP32788 280 aa6.74□□□□□ -1.33
SHC1YER096W YKL063CP35725 167 aa6.74□□□□□ -1.33
SHC1YER096W SEN34P39707 275 aa6.74□□□□□ -1.33
SHC1YER096W RPL6AQ02326 176 aaKnown RBP6.74□□□□□ -1.33
SHC1YER096W NRG1Q03125 231 aa6.74□□□□□ -1.33
SHC1YER096W YDR391CQ04170 232 aa6.74□□□□□ -1.33
SHC1YER096W TGS1Q12052 315 aa6.74□□□□□ -1.33
SHC1YER096W RNH203Q12338 110 aa6.74□□□□□ -1.33
SHC1YER096W YLL053CP0CD98 152 aa6.73□□□□□ -1.33
SHC1YER096W CUP1-1P0CX80 61 aa6.73□□□□□ -1.33
SHC1YER096W CUP1-2P0CX81 61 aa6.73□□□□□ -1.33
SHC1YER096W SAR1P20606 190 aaKnown RBP6.73□□□□□ -1.33
SHC1YER096W RFA1P22336 621 aaKnown RBP6.73□□□□□ -1.33
SHC1YER096W RPI1P23250 407 aaKnown RBP6.73□□□□□ -1.33
SHC1YER096W SIP18P50263 79 aa6.73□□□□□ -1.33
SHC1YER096W UFD1P53044 361 aa6.73□□□□□ -1.33
SHC1YER096W ARG5,6Q01217 863 aa6.73□□□□□ -1.33
SHC1YER096W YPL077CQ02831 240 aa6.73□□□□□ -1.33
SHC1YER096W HNT1Q04344 158 aaKnown RBP6.73□□□□□ -1.33
SHC1YER096W RDI1Q12434 202 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms