RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	SPO77	Q06134	477 aa		2.94	□□□□□ -1.94
NSE3	YDR288W	NOT5	Q12514	560 aa	Predicted RBP	2.94	□□□□□ -1.94
NSE3	YDR288W	YGP1	P38616	354 aa	Known RBP	2.93	□□□□□ -1.94
NSE3	YDR288W	DSK2	P48510	373 aa		2.93	□□□□□ -1.94
NSE3	YDR288W	MYO5	Q04439	1219 aa	Known RBP	2.93	□□□□□ -1.94
NSE3	YDR288W	RRP40	Q08285	240 aa	Known RBP	2.93	□□□□□ -1.94
NSE3	YDR288W	CSM4	Q08955	156 aa		2.93	□□□□□ -1.94
NSE3	YDR288W	ECM13	P38195	257 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	MED6	P38782	295 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	FMC1	P40491	155 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	SNZ2	P53824	298 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	COQ10	Q08058	207 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	YCT1	Q12235	531 aa		2.92	□□□□□ -1.94
NSE3	YDR288W	PPH21	P23594	369 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	SRB4	P32569	687 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	YHB1	P39676	399 aa	Known RBP	2.91	□□□□□ -1.94
NSE3	YDR288W	MRH4	P53166	561 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	SPG4	Q04438	115 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	YLR179C	Q06252	201 aa	Known RBP	2.91	□□□□□ -1.94
NSE3	YDR288W	SUE1	Q06524	206 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	SYC1	Q08553	188 aa	Predicted RBP	2.91	□□□□□ -1.94
NSE3	YDR288W	YOR268C	Q08734	132 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	TY3A-G	Q12173	290 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	ATG31	Q12421	196 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	TY3A-I	Q99219	290 aa		2.91	□□□□□ -1.94
NSE3	YDR288W	DPM1	P14020	267 aa	Known RBP	2.9	□□□□□ -1.95
NSE3	YDR288W	YCR016W	P25617	290 aa	Known RBP	2.9	□□□□□ -1.95
NSE3	YDR288W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.9	□□□□□ -1.95	not detected
NSE3	YDR288W	LIA1	P47120	325 aa	Known RBP	2.9	□□□□□ -1.95
NSE3	YDR288W	CTF19	Q02732	369 aa		2.9	□□□□□ -1.95
NSE3	YDR288W	PET117	Q02771	107 aa		2.9	□□□□□ -1.95
NSE3	YDR288W	SEC22	P22214	214 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	GOS1	P38736	223 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	RGM1	Q00453	211 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	SRL4	Q03085	281 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	KRE28	Q04431	385 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	SWI1	P09547	1314 aa		2.89	□□□□□ -1.95
NSE3	YDR288W	RPL26A	P05743	127 aa	Known RBP	2.88	□□□□□ -1.95
NSE3	YDR288W	TCP1	P12612	559 aa	Known RBP	2.88	□□□□□ -1.95
NSE3	YDR288W	RCN1	P36054	211 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	YBR096W	P38256	230 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	YHR127W	P38833	243 aa	Known RBP	2.88	□□□□□ -1.95
NSE3	YDR288W	YER189W	P40104	122 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	YJL016W	P47072	561 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	YGL034C	P53186	121 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	RPL26B	P53221	127 aa	Known RBP	2.88	□□□□□ -1.95
NSE3	YDR288W	BBP1	Q12365	385 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	SAS5	Q99314	248 aa		2.88	□□□□□ -1.95
NSE3	YDR288W	CLB6	P32943	380 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	MSN4	P33749	630 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	THO1	P40040	218 aa	Known RBP	2.87	□□□□□ -1.95
NSE3	YDR288W	COG3	P40094	801 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	OST2	P46964	130 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	YJR079W	P47126	109 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	IGO1	P53897	168 aa		2.87	□□□□□ -1.95
NSE3	YDR288W	EHD3	P28817	500 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	COS8	P38723	381 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	JHD2	P47156	728 aa	Predicted RBP	2.86	□□□□□ -1.95
NSE3	YDR288W	NUP84	P52891	726 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	SLM2	P53955	656 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	PEX12	Q04370	399 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	YOR186W	Q08560	144 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	EMP46	Q12396	444 aa		2.86	□□□□□ -1.95
NSE3	YDR288W	CFT1	Q06632	1357 aa	Known RBP	2.86	□□□□□ -1.95
NSE3	YDR288W	YLR462W	O13556	202 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	SNF6	P18888	332 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	MRPL25	P23369	157 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	LDB7	P38210	180 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	YEL075C	P39972	122 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	TIF34	P40217	347 aa	Known RBP	2.85	□□□□□ -1.95
NSE3	YDR288W	HOC1	P47124	396 aa		2.85	□□□□□ -1.95
NSE3	YDR288W	YHL026C	P38740	315 aa		2.84	□□□□□ -1.95
NSE3	YDR288W	YMR144W	P40214	342 aa	Known RBP	2.84	□□□□□ -1.95
NSE3	YDR288W	YJR146W	P47174	117 aa		2.84	□□□□□ -1.95
NSE3	YDR288W	YLR126C	Q12288	251 aa		2.84	□□□□□ -1.95
NSE3	YDR288W	IPP1	P00817	287 aa	Known RBP	2.83	□□□□□ -1.96
NSE3	YDR288W	SGA1	P08019	549 aa		2.83	□□□□□ -1.96
NSE3	YDR288W	CUE1	P38428	203 aa		2.83	□□□□□ -1.96
NSE3	YDR288W	VPS68	Q12016	184 aa		2.83	□□□□□ -1.96
NSE3	YDR288W	ERG24	P32462	438 aa	Known RBP	2.82	□□□□□ -1.96
NSE3	YDR288W	MSA2	P36157	363 aa		2.82	□□□□□ -1.96
NSE3	YDR288W	ARC15	P40518	154 aa	RIP-Chip data	2.82	□□□□□ -1.96	not detected
NSE3	YDR288W	FAR8	Q05040	523 aa		2.82	□□□□□ -1.96
NSE3	YDR288W	SEI1	Q06058	285 aa		2.82	□□□□□ -1.96
NSE3	YDR288W	MRPL49	P40858	161 aa	Predicted RBP	2.81	□□□□□ -1.96
NSE3	YDR288W	MNN5	P46982	586 aa		2.81	□□□□□ -1.96
NSE3	YDR288W	CAB4	P53332	305 aa		2.81	□□□□□ -1.96
NSE3	YDR288W	RSM10	Q03201	203 aa		2.81	□□□□□ -1.96
NSE3	YDR288W	YPL257W	Q08974	193 aa		2.81	□□□□□ -1.96
NSE3	YDR288W	ADH3	P07246	375 aa	Known RBP	2.8	□□□□□ -1.96
NSE3	YDR288W	MATALPHA1	P0CY06	175 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	HMLALPHA1	P0CY07	175 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	SCM4	P32564	187 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	ILM1	P47155	203 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	RMR1	P53060	241 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	YGL159W	P53110	370 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	INM2	Q05533	292 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	YLR283W	Q05867	314 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	MHT1	Q12525	324 aa		2.8	□□□□□ -1.96
NSE3	YDR288W	CCA1	P21269	546 aa		2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms