RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W SFK1P35735 353 aa3.74□□□□□ -1.81
HSP42YDR171W COS9P36034 407 aa3.74□□□□□ -1.81
HSP42YDR171W SRP102P36057 244 aaPredicted RBP3.74□□□□□ -1.81
HSP42YDR171W MRPL37P36532 105 aa3.74□□□□□ -1.81
HSP42YDR171W MTC4P38335 694 aaKnown RBP3.74□□□□□ -1.81
HSP42YDR171W DED81P38707 554 aaKnown RBP3.74□□□□□ -1.81
HSP42YDR171W ASP1P38986 381 aaPredicted RBP3.74□□□□□ -1.81
HSP42YDR171W VPS52P39904 641 aa3.74□□□□□ -1.81
HSP42YDR171W SLM1P40485 686 aa3.74□□□□□ -1.81
HSP42YDR171W IKS1P47042 667 aa3.74□□□□□ -1.81
HSP42YDR171W YNL140CP53910 189 aa3.74□□□□□ -1.81
HSP42YDR171W ASI3P53983 676 aa3.74□□□□□ -1.81
HSP42YDR171W ELP6Q04868 273 aa3.74□□□□□ -1.81
HSP42YDR171W KEI1Q06346 221 aa3.74□□□□□ -1.81
HSP42YDR171W MHR1Q06630 226 aa3.74□□□□□ -1.81
HSP42YDR171W YOR365CQ08844 703 aa3.74□□□□□ -1.81
HSP42YDR171W DAP1Q12091 152 aa3.74□□□□□ -1.81
HSP42YDR171W SPC3Q12133 184 aa3.74□□□□□ -1.81
HSP42YDR171W RRP42Q12277 265 aaPredicted RBP3.74□□□□□ -1.81
HSP42YDR171W HAP2P06774 265 aa3.73□□□□□ -1.81
HSP42YDR171W CAR2P07991 424 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W SSA3P09435 649 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W DAL81P21657 970 aa3.73□□□□□ -1.81
HSP42YDR171W POF1P25576 258 aa3.73□□□□□ -1.81
HSP42YDR171W CDC50P25656 391 aa3.73□□□□□ -1.81
HSP42YDR171W BUB3P26449 341 aa3.73□□□□□ -1.81
HSP42YDR171W YUR1P26725 428 aa3.73□□□□□ -1.81
HSP42YDR171W FUN26P31381 517 aa3.73□□□□□ -1.81
HSP42YDR171W SCM4P32564 187 aa3.73□□□□□ -1.81
HSP42YDR171W DOA4P32571 926 aa3.73□□□□□ -1.81
HSP42YDR171W SKN1P33336 771 aa3.73□□□□□ -1.81
HSP42YDR171W ECT1P33412 323 aa3.73□□□□□ -1.81
HSP42YDR171W YNK1P36010 153 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W PAU24P38155 120 aa3.73□□□□□ -1.81
HSP42YDR171W ATG8P38182 117 aaRIP-Chip data3.73□□□□□ -1.81not detected
HSP42YDR171W ZTA1P38230 334 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W CHL4P38907 458 aa3.73□□□□□ -1.81
HSP42YDR171W MET28P40573 187 aa3.73□□□□□ -1.81
HSP42YDR171W OCA1P50946 238 aaPredicted RBP3.73□□□□□ -1.81
HSP42YDR171W YGR117CP53270 476 aa3.73□□□□□ -1.81
HSP42YDR171W PAU12P53343 120 aa3.73□□□□□ -1.81
HSP42YDR171W YNR062CP53748 327 aa3.73□□□□□ -1.81
HSP42YDR171W YNL260CP53846 198 aa3.73□□□□□ -1.81
HSP42YDR171W FMP41P53889 259 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W MRPS17Q03246 237 aaPredicted RBP3.73□□□□□ -1.81
HSP42YDR171W SPC19Q03954 165 aa3.73□□□□□ -1.81
HSP42YDR171W SMA2Q04658 369 aa3.73□□□□□ -1.81
HSP42YDR171W YMR317WQ04893 1140 aa3.73□□□□□ -1.81
HSP42YDR171W RNH202Q05635 350 aa3.73□□□□□ -1.81
HSP42YDR171W RRP45Q05636 305 aaKnown RBP3.73□□□□□ -1.81
HSP42YDR171W PML1Q07930 204 aaPredicted RBP3.73□□□□□ -1.81
HSP42YDR171W SCP1Q08873 200 aa3.73□□□□□ -1.81
HSP42YDR171W TIR4Q12218 487 aaPredicted RBP3.73□□□□□ -1.81
HSP42YDR171W EAF3Q12432 401 aa3.73□□□□□ -1.81
HSP42YDR171W FRE6Q12473 712 aa3.73□□□□□ -1.81
HSP42YDR171W SKS1Q12505 502 aa3.73□□□□□ -1.81
HSP42YDR171W SET6Q12529 373 aa3.73□□□□□ -1.81
HSP42YDR171W YCL001W-BQ96VH2 84 aa3.73□□□□□ -1.81
HSP42YDR171W CDC21P06785 304 aa3.72□□□□□ -1.81
HSP42YDR171W YAR066WP0CX18 203 aa3.72□□□□□ -1.81
HSP42YDR171W YHR214WP0CX19 203 aa3.72□□□□□ -1.81
HSP42YDR171W MRS3P10566 314 aa3.72□□□□□ -1.81
HSP42YDR171W SEC59P20048 519 aa3.72□□□□□ -1.81
HSP42YDR171W EPT1P22140 391 aa3.72□□□□□ -1.81
HSP42YDR171W YIM1P28625 365 aa3.72□□□□□ -1.81
HSP42YDR171W SSS1P35179 80 aa3.72□□□□□ -1.81
HSP42YDR171W BNA4P38169 460 aa3.72□□□□□ -1.81
HSP42YDR171W POP8P38208 133 aa3.72□□□□□ -1.81
HSP42YDR171W TCM62P38228 572 aaKnown RBP3.72□□□□□ -1.81
HSP42YDR171W SHG1P38337 142 aa3.72□□□□□ -1.81
HSP42YDR171W URA8P38627 578 aaPredicted RBP3.72□□□□□ -1.81
HSP42YDR171W CAT5P41735 233 aa3.72□□□□□ -1.81
HSP42YDR171W RPL10P41805 221 aaKnown RBP3.72□□□□□ -1.81
HSP42YDR171W ALK1P43633 760 aaKnown RBP3.72□□□□□ -1.81
HSP42YDR171W YGL260WP53056 76 aa3.72□□□□□ -1.81
HSP42YDR171W SWC4P53201 476 aa3.72□□□□□ -1.81
HSP42YDR171W YNL143CP53908 130 aa3.72□□□□□ -1.81
HSP42YDR171W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
HSP42YDR171W SNO1Q03144 224 aa3.72□□□□□ -1.81
HSP42YDR171W OST6Q03723 332 aa3.72□□□□□ -1.81
HSP42YDR171W UTP15Q04305 513 aaKnown RBP3.72□□□□□ -1.81
HSP42YDR171W PEX30Q06169 523 aa3.72□□□□□ -1.81
HSP42YDR171W NOC4Q06512 552 aaPredicted RBP3.72□□□□□ -1.81
HSP42YDR171W YLR036CQ07986 203 aa3.72□□□□□ -1.81
HSP42YDR171W HMS1Q12398 434 aa3.72□□□□□ -1.81
HSP42YDR171W YPR145C-AQ2V2P0 78 aa3.72□□□□□ -1.81
HSP42YDR171W COX9P07255 59 aa3.71□□□□□ -1.82
HSP42YDR171W SCH9P11792 824 aaKnown RBP3.71□□□□□ -1.82
HSP42YDR171W MAS2P11914 482 aa3.71□□□□□ -1.82
HSP42YDR171W ATS1P31386 333 aa3.71□□□□□ -1.82
HSP42YDR171W MSK1P32048 576 aa3.71□□□□□ -1.82
HSP42YDR171W PAU2P32612 120 aa3.71□□□□□ -1.82
HSP42YDR171W FMP46P36141 133 aaKnown RBP3.71□□□□□ -1.82
HSP42YDR171W SDH4P37298 181 aa3.71□□□□□ -1.82
HSP42YDR171W APE3P37302 537 aaKnown RBP3.71□□□□□ -1.82
HSP42YDR171W DTR1P38125 572 aa3.71□□□□□ -1.82
HSP42YDR171W THI2P38141 450 aa3.71□□□□□ -1.82
HSP42YDR171W YPC1P38298 316 aa3.71□□□□□ -1.82
HSP42YDR171W YPT31P38555 223 aaKnown RBP3.71□□□□□ -1.82
HSP42YDR171W YHR177WP38867 453 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms