RNA–Protein interactions for RNA: YDR142C

PEX7, Transcript of Peroxisomal signal receptor for peroxisomal matrix proteins, yeast

Gene PEX7, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX7	YDR142C	YBR096W	P38256	230 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	MBA1	P38300	278 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	WSC4	P38739	605 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	IKI1	P38874	309 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	MGA1	P53050	456 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	NOP19	P53317	196 aa	Predicted RBP	4.56	□□□□□ -1.68
PEX7	YDR142C	CTF19	Q02732	369 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	YMR114C	Q04471	368 aa	Known RBP	4.56	□□□□□ -1.68
PEX7	YDR142C	NDD1	Q08887	554 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	MMT2	Q08970	484 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	RFM1	Q12192	310 aa		4.56	□□□□□ -1.68
PEX7	YDR142C	RPL21B	Q12672	160 aa	Known RBP	4.56	□□□□□ -1.68
PEX7	YDR142C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.56	□□□□□ -1.68
PEX7	YDR142C	RPL4A	P10664	362 aa	Known RBP	4.55	□□□□□ -1.68
PEX7	YDR142C	SGE1	P33335	543 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	YKL075C	P36083	450 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PEX7	YDR142C	RFT1	P38206	574 aa	Predicted RBP	4.55	□□□□□ -1.68
PEX7	YDR142C	STB1	P42845	420 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	ADO1	P47143	340 aa	Known RBP	4.55	□□□□□ -1.68
PEX7	YDR142C	RPL4B	P49626	362 aa	Known RBP	4.55	□□□□□ -1.68
PEX7	YDR142C	NSA1	P53136	463 aa	Predicted RBP	4.55	□□□□□ -1.68
PEX7	YDR142C	YMR166C	Q03829	368 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	GIM5	Q04493	163 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	YMR317W	Q04893	1140 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	PEX10	Q05568	337 aa		4.55	□□□□□ -1.68
PEX7	YDR142C	ATG15	P25641	520 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	RFA3	P26755	122 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	GDH2	P33327	1092 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	NTF2	P33331	125 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	GOS1	P38736	223 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	TRM5	P38793	499 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	BAT1	P38891	393 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	TIM17	P39515	158 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	YHB1	P39676	399 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	SEN34	P39707	275 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	SEC72	P39742	193 aa	Known RBP	4.54	□□□□□ -1.68
PEX7	YDR142C	KRE29	P40026	464 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	DIA1	P54005	336 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	SDC1	Q03323	175 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	FAR8	Q05040	523 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	HEM25	Q07534	307 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	YCL012C	Q8J0M4	134 aa		4.54	□□□□□ -1.68
PEX7	YDR142C	QCR7	P00128	127 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	BCY1	P07278	416 aa	Known RBP	4.53	□□□□□ -1.68
PEX7	YDR142C	ASP3-2	P0CX77	362 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	ASP3-3	P0CX78	362 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	ASP3-4	P0CX79	362 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	ASP3-1	P0CZ17	362 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	CDC50	P25656	391 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	EHD3	P28817	500 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	SPS19	P32573	292 aa	Known RBP	4.53	□□□□□ -1.68
PEX7	YDR142C	FRM2	P37261	193 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	YHR127W	P38833	243 aa	Known RBP	4.53	□□□□□ -1.68
PEX7	YDR142C	NIF3	P53081	288 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	CDD1	Q06549	142 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	COQ10	Q08058	207 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	YPL278C	Q08990	100 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	YLR126C	Q12288	251 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	NUP192	P47054	1683 aa		4.53	□□□□□ -1.68
PEX7	YDR142C	SPT3	P06844	337 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	YKR104W	P0CE69	306 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	VPS51	P36116	164 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	MRPL3	P36516	390 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	RFS1	P38234	210 aa	Known RBP	4.52	□□□□□ -1.69
PEX7	YDR142C	SHE3	P38272	425 aa	Known RBP	4.52	□□□□□ -1.69
PEX7	YDR142C	NUP57	P48837	541 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	YGL039W	P53183	348 aa	Known RBP	4.52	□□□□□ -1.69
PEX7	YDR142C	YDR115W	Q04598	105 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	FUS2	Q05670	677 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	DXO1	Q06349	442 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	LOA1	Q06508	300 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	GPM2	Q12008	311 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	SIR4	P11978	1358 aa		4.52	□□□□□ -1.69
PEX7	YDR142C	DPB2	P24482	689 aa	Predicted RBP	4.51	□□□□□ -1.69
PEX7	YDR142C	IMP1	P28627	190 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	VPH2	P32341	215 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	AST1	P35183	429 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	OM14	P38325	134 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	MIG3	P39943	394 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	AVT7	P40501	490 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	YFL064C	P43540	174 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	TRM9	P49957	279 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	ALG13	P53178	202 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	MRS2	Q01926	470 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	MRX11	Q03079	207 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	SPG4	Q04438	115 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	YPR147C	Q06522	304 aa	Known RBP	4.51	□□□□□ -1.69
PEX7	YDR142C	YOR376W	Q08900	122 aa		4.51	□□□□□ -1.69
PEX7	YDR142C	MCM22	P47167	239 aa		4.5	□□□□□ -1.69
PEX7	YDR142C	SLX9	P53251	210 aa	Predicted RBP	4.5	□□□□□ -1.69
PEX7	YDR142C	SNZ2	P53824	298 aa		4.5	□□□□□ -1.69
PEX7	YDR142C	FYV6	P53913	173 aa		4.5	□□□□□ -1.69
PEX7	YDR142C	YPL113C	Q02961	396 aa		4.5	□□□□□ -1.69
PEX7	YDR142C	LIP2	Q06005	328 aa		4.5	□□□□□ -1.69
PEX7	YDR142C	RRP40	Q08285	240 aa	Known RBP	4.5	□□□□□ -1.69
PEX7	YDR142C	MRPL39	P36533	70 aa		4.49	□□□□□ -1.69
PEX7	YDR142C	GGC1	P38988	300 aa		4.49	□□□□□ -1.69
PEX7	YDR142C	SNZ3	P43545	298 aa		4.49	□□□□□ -1.69
PEX7	YDR142C	IGD1	P43598	195 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms