RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PTGESO14684 152 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 SLC16A4O15374 487 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 MAPTP10636 758 aaKnown RBP18.32■□□□□ 0.52
USB1-211ENST00000565662 PAX3P23760 479 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 ZNF131P52739 623 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 RESTQ13127 1097 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 CCDC73Q6ZRK6 1079 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
USB1-211ENST00000565662 AUTS2Q8WXX7 1259 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 HVCN1Q96D96 273 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 BICD1Q96G01 975 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 ZNF396Q96N95 335 aaPredicted RBP18.32■□□□□ 0.52
USB1-211ENST00000565662 PPP1R10Q96QC0 940 aaKnown RBP18.32■□□□□ 0.52
USB1-211ENST00000565662 EPHX3Q9H6B9 360 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 GDAQ9Y2T3 454 aa18.32■□□□□ 0.52
USB1-211ENST00000565662 DENND4AQ7Z401 1863 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 KCNE1P15382 129 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 EPCAMP16422 314 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 PLCG1P19174 1290 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 COL9A1P20849 921 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
USB1-211ENST00000565662 MCL1Q07820 350 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 RARS2Q5T160 578 aaKnown RBP18.31■□□□□ 0.52
USB1-211ENST00000565662 EEF1DP3Q658K8 133 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 DCLRE1AQ6PJP8 1040 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 GPR149Q86SP6 731 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 LRFN3Q9BTN0 628 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 MAN1C1Q9NR34 630 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 CNTN3Q9P232 1028 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
USB1-211ENST00000565662 MTCL1Q9Y4B5 1905 aaKnown RBP18.31■□□□□ 0.52
USB1-211ENST00000565662 CASTOR2A6NHX0 329 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 C2CD2LO14523 706 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 HNRNPDLO14979 420 aaKnown RBP18.3■□□□□ 0.52
USB1-211ENST00000565662 TEX28O15482 410 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 PAPLNO95428 1278 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 PIGRP01833 764 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 DDIT3P35638 169 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 LIG4P49917 911 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 POU5F1Q01860 360 aaKnown RBP18.3■□□□□ 0.52
USB1-211ENST00000565662 ALCAMQ13740 583 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 ATL3Q6DD88 541 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 ANKS3Q6ZW76 656 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 HAUS6Q7Z4H7 955 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 CD302Q8IX05 232 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 UBALD2Q8IYN6 164 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 ZDHHC14Q8IZN3 488 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 RIN2Q8WYP3 895 aaPredicted RBP18.3■□□□□ 0.52
USB1-211ENST00000565662 EDAQ92838 391 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 SNX27Q96L92 541 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 MFSD14AQ96MC6 490 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 REEP2Q9BRK0 252 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
USB1-211ENST00000565662 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
USB1-211ENST00000565662 TTLL13PA6NNM8 815 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 K7ENM7 598 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 TRAK2O60296 914 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 B3GAT3O94766 335 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 KIF4AO95239 1232 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 EDN1P05305 212 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 CLTAP09496 248 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 GAP43P17677 238 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 HOXA9P31269 272 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
USB1-211ENST00000565662 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
USB1-211ENST00000565662 SLC39A14Q15043 492 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 KARSQ15046 597 aaKnown RBP18.29■□□□□ 0.52
USB1-211ENST00000565662 PTPAQ15257 358 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 NAB2Q15742 525 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 LIN9Q5TKA1 542 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 RRAGBQ5VZM2 374 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 TAS1R3Q7RTX0 852 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 BMP8AQ7Z5Y6 402 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 ZBTB33Q86T24 672 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
USB1-211ENST00000565662 GPR62Q9BZJ7 368 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 CUEDC2Q9H467 287 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 BLOC1S4Q9NUP1 217 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 MTMR6Q9Y217 621 aa18.29■□□□□ 0.52
USB1-211ENST00000565662 PDCD11Q14690 1871 aaKnown RBP18.29■□□□□ 0.52
USB1-211ENST00000565662 SMIM28A0A1B0GU29 152 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 ARHGEF37A1IGU5 675 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 SYN3O14994 580 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 POU2F2P09086 479 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 HNRNPA1P09651 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
USB1-211ENST00000565662 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
USB1-211ENST00000565662 RAD51AP2Q09MP3 1159 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 MTMR3Q13615 1198 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 PSMD5Q16401 504 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 UPP1Q16831 310 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 FAM171A1Q5VUB5 890 aa18.28■□□□□ 0.52
USB1-211ENST00000565662 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms