RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Pcdha2Q91Y17 948 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Htra3Q9D236 459 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Lrrc71Q9D3W5 558 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gins2Q9D600 185 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Drap1Q9D6N5 205 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc15a2Q9ES07 729 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Map7d2A2AG50 781 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Taf4bG5E8Z2 855 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 EgfP01132 1217 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tp53P02340 387 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tpm3P21107 285 aaKnown RBP10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Hdgfl1Q2VPR5 283 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Myt1Q8CFC2 1127 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Polr2bQ8CFI7 1174 aaKnown RBP10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dnajc28Q8VCE1 385 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tmem39aQ9CYC3 486 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Serpina9Q9D7D2 418 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rnf6Q9DBU5 667 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rnf103Q9R1W3 683 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gjc1P28229 396 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gja8P28236 440 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cd300aQ6SJQ0 318 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rd3Q8BRE0 195 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cog3Q8CI04 820 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ablim1Q8K4G5 861 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dusp6Q9DBB1 381 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 PollQ9QXE2 573 aaKnown RBP10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 DgkeQ9R1C6 564 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Hoxc8P09025 242 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Btbd1P58544 488 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gbp1Q01514 589 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 P3h1Q3V1T4 739 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dsg1aQ61495 1057 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pla2g4cQ64GA5 597 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ube2q1Q7TSS2 422 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Vat1lQ80TB8 417 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Depdc1bQ8BH88 529 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 GancQ8BVW0 898 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dnm3Q8BZ98 863 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ccdc9Q8VC31 543 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ddx27Q921N6 760 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Clstn3Q99JH7 956 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cndp2Q9D1A2 475 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mgea5Q9EQQ9 916 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Bcl11aQ9QYE3 773 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fbxo17Q9QZM8 286 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tle2Q9WVB2 767 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Arih2Q9Z1K6 492 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Bnip3lQ9Z2F7 218 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Xpnpep3B7ZMP1 506 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm4788E9Q8B5 879 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm6583E9Q8Z1 469 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm3739L7N296 216 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Alkbh1P0CB42 389 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Scp2P32020 547 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Has1Q61647 583 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ppp1r26Q6A025 1163 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Zbtb9Q8CDC7 459 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mob2Q8VI63 235 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Asic2Q925H0 512 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rilpl1Q9JJC6 406 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tlr2Q9QUN7 784 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Msl3Q9WVG9 525 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cd97Q9Z0M6 818 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ttll8A4Q9F1 832 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Trim30bE9PVL6 203 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 RdxP26043 583 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Sec31aQ3UPL0 1230 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Abi3bpQ59IW6 1179 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tbx2Q60707 711 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Asic3Q6X1Y6 530 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Acad11Q80XL6 779 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc7a14Q8BXR1 771 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Brd3Q8K2F0 726 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr30Q8VGD8 315 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Zmat2Q9CPW7 199 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tubgcp4Q9D4F8 667 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mkrn2Q9ERV1 416 aaKnown RBP10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tnfrsf10bQ9QZM4 381 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dnajc12Q9R022 198 aa10.69□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm10801F7C7Q0 168 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dpep1P31428 410 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Wscd1Q80XH4 572 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Castor2Q8CAB8 329 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Abi1Q8CBW3 481 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc26a6Q8CIW6 758 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Vopp1Q8R1C3 172 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 PcntP48725 2898 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rap1gapA2ALS5 663 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Supt3B0QZW4 406 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm4846B2RWH8 538 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Zfp882E9Q4R4 555 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 TnfP06804 235 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ptpn11P35235 597 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cdh8P97291 799 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Entpd7Q3TCT4 606 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Sorbs1Q62417 1290 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mindy1Q76LS9 468 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Amz1Q8BVF9 502 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc13a4Q8BZ82 625 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms