Protein–RNA interactions for Protein: Q80XH4

Wscd1, WSC domain-containing protein 1, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Wscd1Q80XH4 Gm25239-201ENSMUST00000174915 86 ntBASIC40.75■■■■■ 4.11
Wscd1Q80XH4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Wscd1Q80XH4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Wscd1Q80XH4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Wscd1Q80XH4 Gm15042-201ENSMUST00000120212 883 ntBASIC35.78■■■■□ 3.32
Wscd1Q80XH4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Wscd1Q80XH4 Gm24109-201ENSMUST00000175489 103 ntBASIC35.23■■■■□ 3.23
Wscd1Q80XH4 Gm15045-201ENSMUST00000117359 883 ntBASIC35.04■■■■□ 3.2
Wscd1Q80XH4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
Wscd1Q80XH4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Wscd1Q80XH4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Wscd1Q80XH4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Wscd1Q80XH4 Gm23366-201ENSMUST00000175022 89 ntBASIC34.04■■■■□ 3.04
Wscd1Q80XH4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Wscd1Q80XH4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Wscd1Q80XH4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.55■■■□□ 2.96
Wscd1Q80XH4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Wscd1Q80XH4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Wscd1Q80XH4 Psd-208ENSMUST00000224556 2034 ntBASIC33.24■■■□□ 2.91
Wscd1Q80XH4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Wscd1Q80XH4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Wscd1Q80XH4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Wscd1Q80XH4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
Wscd1Q80XH4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Wscd1Q80XH4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Wscd1Q80XH4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Wscd1Q80XH4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.86■■■□□ 2.85
Wscd1Q80XH4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.78■■■□□ 2.84
Wscd1Q80XH4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Wscd1Q80XH4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.62■■■□□ 2.81
Wscd1Q80XH4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.38■■■□□ 2.77
Wscd1Q80XH4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Wscd1Q80XH4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.26■■■□□ 2.75
Wscd1Q80XH4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Wscd1Q80XH4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Wscd1Q80XH4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Wscd1Q80XH4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Wscd1Q80XH4 Gm25238-201ENSMUST00000174914 89 ntBASIC32.12■■■□□ 2.73
Wscd1Q80XH4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Wscd1Q80XH4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.03■■■□□ 2.72
Wscd1Q80XH4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Wscd1Q80XH4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Wscd1Q80XH4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.65■■■□□ 2.66
Wscd1Q80XH4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Wscd1Q80XH4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Wscd1Q80XH4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Wscd1Q80XH4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Wscd1Q80XH4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
Wscd1Q80XH4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.44■■■□□ 2.62
Wscd1Q80XH4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.42■■■□□ 2.62
Wscd1Q80XH4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Wscd1Q80XH4 Gm27325-201ENSMUST00000175467 74 ntBASIC31.4■■■□□ 2.62
Wscd1Q80XH4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Wscd1Q80XH4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Wscd1Q80XH4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Wscd1Q80XH4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.12■■■□□ 2.57
Wscd1Q80XH4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.09■■■□□ 2.57
Wscd1Q80XH4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.04■■■□□ 2.56
Wscd1Q80XH4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Wscd1Q80XH4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Wscd1Q80XH4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
Wscd1Q80XH4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Wscd1Q80XH4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Wscd1Q80XH4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.95■■■□□ 2.54
Wscd1Q80XH4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
Wscd1Q80XH4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Wscd1Q80XH4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Wscd1Q80XH4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Wscd1Q80XH4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Wscd1Q80XH4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Wscd1Q80XH4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Wscd1Q80XH4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Wscd1Q80XH4 Rab21-202ENSMUST00000218831 843 ntBASIC30.69■■■□□ 2.5
Wscd1Q80XH4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Wscd1Q80XH4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Wscd1Q80XH4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.63■■■□□ 2.49
Wscd1Q80XH4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.57■■■□□ 2.48
Wscd1Q80XH4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.57■■■□□ 2.48
Wscd1Q80XH4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.57■■■□□ 2.48
Wscd1Q80XH4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Wscd1Q80XH4 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.51■■■□□ 2.47
Wscd1Q80XH4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Wscd1Q80XH4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Wscd1Q80XH4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Wscd1Q80XH4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Wscd1Q80XH4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.31■■■□□ 2.44
Wscd1Q80XH4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Wscd1Q80XH4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Wscd1Q80XH4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Wscd1Q80XH4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Wscd1Q80XH4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.23■■■□□ 2.43
Wscd1Q80XH4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Wscd1Q80XH4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.1■■■□□ 2.41
Wscd1Q80XH4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Wscd1Q80XH4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Wscd1Q80XH4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Wscd1Q80XH4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Wscd1Q80XH4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30■■■□□ 2.39
Wscd1Q80XH4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Wscd1Q80XH4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms