Protein–RNA interactions for Protein: P97291

Cdh8, Cadherin-8, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh8P97291 Gm25239-201ENSMUST00000174915 86 ntBASIC40■■■■□ 3.99
Cdh8P97291 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Cdh8P97291 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Cdh8P97291 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Cdh8P97291 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Cdh8P97291 Gm15042-201ENSMUST00000120212 883 ntBASIC35.22■■■■□ 3.23
Cdh8P97291 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
Cdh8P97291 Gm24109-201ENSMUST00000175489 103 ntBASIC34.54■■■■□ 3.12
Cdh8P97291 Gm15045-201ENSMUST00000117359 883 ntBASIC34.53■■■■□ 3.12
Cdh8P97291 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Cdh8P97291 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cdh8P97291 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cdh8P97291 Psd-208ENSMUST00000224556 2034 ntBASIC33.46■■■□□ 2.95
Cdh8P97291 Gm23366-201ENSMUST00000175022 89 ntBASIC33.4■■■□□ 2.94
Cdh8P97291 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.37■■■□□ 2.93
Cdh8P97291 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Cdh8P97291 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cdh8P97291 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Cdh8P97291 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Cdh8P97291 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Cdh8P97291 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Cdh8P97291 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cdh8P97291 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cdh8P97291 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Cdh8P97291 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Cdh8P97291 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cdh8P97291 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.54■■■□□ 2.8
Cdh8P97291 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Cdh8P97291 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.38■■■□□ 2.77
Cdh8P97291 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Cdh8P97291 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Cdh8P97291 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cdh8P97291 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.08■■■□□ 2.73
Cdh8P97291 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.98■■■□□ 2.71
Cdh8P97291 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cdh8P97291 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.65■■■□□ 2.66
Cdh8P97291 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cdh8P97291 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cdh8P97291 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cdh8P97291 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cdh8P97291 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cdh8P97291 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cdh8P97291 Gm25238-201ENSMUST00000174914 89 ntBASIC31.51■■■□□ 2.63
Cdh8P97291 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cdh8P97291 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.45■■■□□ 2.63
Cdh8P97291 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cdh8P97291 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cdh8P97291 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.35■■■□□ 2.61
Cdh8P97291 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.29■■■□□ 2.6
Cdh8P97291 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Cdh8P97291 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cdh8P97291 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cdh8P97291 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cdh8P97291 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cdh8P97291 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cdh8P97291 Gm27325-201ENSMUST00000175467 74 ntBASIC30.95■■■□□ 2.55
Cdh8P97291 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.93■■■□□ 2.54
Cdh8P97291 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.89■■■□□ 2.54
Cdh8P97291 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cdh8P97291 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
Cdh8P97291 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cdh8P97291 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.74■■■□□ 2.51
Cdh8P97291 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cdh8P97291 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
Cdh8P97291 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cdh8P97291 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cdh8P97291 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Cdh8P97291 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cdh8P97291 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cdh8P97291 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cdh8P97291 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.49■■■□□ 2.47
Cdh8P97291 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.49■■■□□ 2.47
Cdh8P97291 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.48■■■□□ 2.47
Cdh8P97291 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cdh8P97291 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cdh8P97291 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.43■■■□□ 2.46
Cdh8P97291 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Cdh8P97291 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Cdh8P97291 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Cdh8P97291 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Cdh8P97291 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.19■■■□□ 2.42
Cdh8P97291 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cdh8P97291 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cdh8P97291 Rab21-202ENSMUST00000218831 843 ntBASIC30.14■■■□□ 2.42
Cdh8P97291 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cdh8P97291 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.01■■■□□ 2.39
Cdh8P97291 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cdh8P97291 Gm25262-201ENSMUST00000174934 133 ntBASIC29.96■■■□□ 2.39
Cdh8P97291 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Cdh8P97291 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Cdh8P97291 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.85■■■□□ 2.37
Cdh8P97291 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.85■■■□□ 2.37
Cdh8P97291 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cdh8P97291 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.82■■■□□ 2.36
Cdh8P97291 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cdh8P97291 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cdh8P97291 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Cdh8P97291 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cdh8P97291 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
Cdh8P97291 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms