RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C YDL218WQ07629 317 aa1.36□□□□□ -2.19
SSK2YNR031C LDS2Q08218 356 aa1.36□□□□□ -2.19
SSK2YNR031C AFT2Q08957 416 aa1.36□□□□□ -2.19
SSK2YNR031C VPS68Q12016 184 aa1.36□□□□□ -2.19
SSK2YNR031C YLR053CQ12026 108 aa1.36□□□□□ -2.19
SSK2YNR031C SLF1Q12034 447 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C TY1A-GR1Q12085 440 aa1.36□□□□□ -2.19
SSK2YNR031C RKI1Q12189 258 aa1.36□□□□□ -2.19
SSK2YNR031C YPR011CQ12251 326 aa1.36□□□□□ -2.19
SSK2YNR031C ICT1Q12385 394 aa1.36□□□□□ -2.19
SSK2YNR031C TY1A-DR3Q12441 440 aa1.36□□□□□ -2.19
SSK2YNR031C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C TY1A-OLQ92392 440 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C HBN1Q96VH4 193 aa1.36□□□□□ -2.19
SSK2YNR031C TPI1P00942 248 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C RPL30P14120 105 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C VPS33P20795 691 aa1.36□□□□□ -2.19
SSK2YNR031C RFA1P22336 621 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C LDS1P31379 325 aa1.36□□□□□ -2.19
SSK2YNR031C RPC25P35718 212 aa1.36□□□□□ -2.19
SSK2YNR031C YBR053CP38235 358 aa1.36□□□□□ -2.19
SSK2YNR031C YBR197CP38306 217 aa1.36□□□□□ -2.19
SSK2YNR031C SHG1P38337 142 aa1.36□□□□□ -2.19
SSK2YNR031C MLH1P38920 769 aa1.36□□□□□ -2.19
SSK2YNR031C GGC1P38988 300 aa1.36□□□□□ -2.19
SSK2YNR031C MNN9P39107 395 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C SLZ1P40167 298 aa1.36□□□□□ -2.19
SSK2YNR031C YIR035CP40579 254 aa1.36□□□□□ -2.19
SSK2YNR031C SSU1P41930 458 aa1.36□□□□□ -2.19
SSK2YNR031C YPI1P43587 155 aa1.36□□□□□ -2.19
SSK2YNR031C DPB11P47027 764 aaPredicted RBP1.36□□□□□ -2.19
SSK2YNR031C AIF1P52923 378 aa1.36□□□□□ -2.19
SSK2YNR031C TAD1P53065 400 aa1.36□□□□□ -2.19
SSK2YNR031C MDM34P53083 459 aa1.36□□□□□ -2.19
SSK2YNR031C YGR111WP53265 400 aa1.36□□□□□ -2.19
SSK2YNR031C ERV29P53337 310 aa1.36□□□□□ -2.19
SSK2YNR031C YLR460CP54007 376 aa1.36□□□□□ -2.19
SSK2YNR031C ERG13P54839 491 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C GIP3Q03016 1276 aa1.36□□□□□ -2.19
SSK2YNR031C PRM15Q03262 622 aa1.36□□□□□ -2.19
SSK2YNR031C CSN9Q03981 162 aa1.36□□□□□ -2.19
SSK2YNR031C ROY1Q04847 553 aa1.36□□□□□ -2.19
SSK2YNR031C YMR315WQ04869 349 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C PNP1Q05788 311 aa1.36□□□□□ -2.19
SSK2YNR031C YLR036CQ07986 203 aa1.36□□□□□ -2.19
SSK2YNR031C NMD4Q12129 218 aa1.36□□□□□ -2.19
SSK2YNR031C DCN1Q12395 269 aa1.36□□□□□ -2.19
SSK2YNR031C SAS5Q99314 248 aa1.36□□□□□ -2.19
SSK2YNR031C TDH2P00358 332 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C TDH3P00359 332 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
SSK2YNR031C RPL25P04456 142 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C GAL7P08431 366 aa1.36□□□□□ -2.19
SSK2YNR031C ZRC1P20107 442 aa1.36□□□□□ -2.19
SSK2YNR031C YCK2P23292 546 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C PRE7P23724 241 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C YKL187CP34231 750 aa1.36□□□□□ -2.19
SSK2YNR031C HEK2P38199 381 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19 RIP-Chip
SSK2YNR031C FIG1P38224 298 aa1.36□□□□□ -2.19
SSK2YNR031C IML3P38265 245 aa1.36□□□□□ -2.19
SSK2YNR031C SET5P38890 526 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C SEN34P39707 275 aa1.36□□□□□ -2.19
SSK2YNR031C YEL028WP39989 153 aa1.36□□□□□ -2.19
SSK2YNR031C PRE6P40303 254 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C ATF1P40353 525 aa1.36□□□□□ -2.19
SSK2YNR031C CIN5P40917 295 aa1.36□□□□□ -2.19
SSK2YNR031C GLC8P41818 229 aa1.36□□□□□ -2.19
SSK2YNR031C GNA1P43577 159 aaPredicted RBP1.36□□□□□ -2.19
SSK2YNR031C MRX5P47007 382 aa1.36□□□□□ -2.19
SSK2YNR031C ECM27P47144 725 aa1.36□□□□□ -2.19
SSK2YNR031C COX18P53239 316 aa1.36□□□□□ -2.19
SSK2YNR031C COS6P53344 381 aa1.36□□□□□ -2.19
SSK2YNR031C COS1P53822 381 aa1.36□□□□□ -2.19
SSK2YNR031C AQR1P53943 586 aa1.36□□□□□ -2.19
SSK2YNR031C MSC1Q03104 513 aa1.36□□□□□ -2.19
SSK2YNR031C CGI121Q03705 181 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C API2Q04413 109 aa1.36□□□□□ -2.19
SSK2YNR031C RNH202Q05635 350 aa1.36□□□□□ -2.19
SSK2YNR031C TPO3Q06451 622 aa1.36□□□□□ -2.19
SSK2YNR031C YFH1Q07540 174 aa1.36□□□□□ -2.19
SSK2YNR031C YOL075CQ08234 1294 aa1.36□□□□□ -2.19
SSK2YNR031C ATX2Q12067 313 aa1.36□□□□□ -2.19
SSK2YNR031C FYV7Q12247 151 aa1.36□□□□□ -2.19
SSK2YNR031C SMT3Q12306 101 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C ERG27Q12452 347 aaKnown RBP1.36□□□□□ -2.19
SSK2YNR031C YPR1Q12458 312 aa1.36□□□□□ -2.19
SSK2YNR031C VPS63O13549 108 aa1.35□□□□□ -2.19
SSK2YNR031C RAD52P06778 471 aaKnown RBP1.35□□□□□ -2.19
SSK2YNR031C PHO80P20052 293 aa1.35□□□□□ -2.19
SSK2YNR031C RPS1BP23248 255 aaKnown RBP1.35□□□□□ -2.19
SSK2YNR031C PRE9P23638 258 aaKnown RBP1.35□□□□□ -2.19
SSK2YNR031C ERV1P27882 189 aa1.35□□□□□ -2.19
SSK2YNR031C CAM1P29547 415 aaKnown RBP1.35□□□□□ -2.19
SSK2YNR031C SPT14P32363 452 aa1.35□□□□□ -2.19
SSK2YNR031C MDH3P32419 343 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
SSK2YNR031C CDC5P32562 705 aa1.35□□□□□ -2.19
SSK2YNR031C SCM4P32564 187 aa1.35□□□□□ -2.19
SSK2YNR031C STE14P32584 239 aa1.35□□□□□ -2.19
SSK2YNR031C TOA2P32774 122 aa1.35□□□□□ -2.19
SSK2YNR031C YSC84P32793 468 aa1.35□□□□□ -2.19
SSK2YNR031C YOX1P34161 385 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms