RNA–Protein interactions for RNA: YNR010W

CSE2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene CSE2, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSE2	YNR010W	DDI2	P0CH63	225 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	DDI3	P0CH64	225 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	UGA1	P17649	471 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	RPL5	P26321	297 aa	Known RBP	0.25	□□□□□ -2.37
CSE2	YNR010W	UIP5	P36137	443 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	MAL32	P38158	584 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	YHB1	P39676	399 aa	Known RBP	0.25	□□□□□ -2.37
CSE2	YNR010W	GTO1	P48239	356 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	MAL12	P53341	584 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	SWS2	P53937	143 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	PRO2	P54885	456 aa	Known RBP	0.25	□□□□□ -2.37
CSE2	YNR010W	CYT2	Q00873	224 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	YLR162W	Q06235	118 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	POM33	Q12164	279 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	DCN1	Q12395	269 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	MHT1	Q12525	324 aa		0.25	□□□□□ -2.37
CSE2	YNR010W	SLH1	P53327	1967 aa	Known RBP	0.25	□□□□□ -2.37
CSE2	YNR010W	ACC1	Q00955	2233 aa	Known RBP	0.24	□□□□□ -2.37
CSE2	YNR010W	FPR1	P20081	114 aa	Known RBP	0.24	□□□□□ -2.37
CSE2	YNR010W	AGP3	P43548	558 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	OST2	P46964	130 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	COX16	P47081	118 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	NBP35	P52920	328 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	TRM44	Q02648	567 aa	Known RBP	0.24	□□□□□ -2.37
CSE2	YNR010W	SIA1	Q12212	622 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	YPR011C	Q12251	326 aa		0.24	□□□□□ -2.37
CSE2	YNR010W	YAL064W-B	O13512	126 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	YER188C-A	P0C0V2	99 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	FBA1	P14540	359 aa	Known RBP	0.23	□□□□□ -2.37
CSE2	YNR010W	GPI12	P23797	304 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	CAM1	P29547	415 aa	Known RBP	0.23	□□□□□ -2.37
CSE2	YNR010W	SMI1	P32566	505 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	PRS4	P38063	326 aa	Predicted RBP	0.23	□□□□□ -2.37
CSE2	YNR010W	YHR022C	P38763	256 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	END3	P39013	349 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	VBA1	Q04301	562 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	CUR1	Q06469	252 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	EMP46	Q12396	444 aa		0.23	□□□□□ -2.37
CSE2	YNR010W	MDH2	P22133	377 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	UPS2	P35200	230 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	PHO88	P38264	188 aa	Predicted RBP	0.22	□□□□□ -2.37
CSE2	YNR010W	APE4	P38821	490 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	SSO2	P39926	295 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	PRM15	Q03262	622 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	RCF1	Q03713	159 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	SEC10	Q06245	871 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	YLR179C	Q06252	201 aa	Known RBP	0.22	□□□□□ -2.37
CSE2	YNR010W	ARV1	Q06541	321 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	VAC14	Q06708	880 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	PST1	Q12355	444 aa		0.22	□□□□□ -2.37
CSE2	YNR010W	COX5A	P00424	153 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	Q0255	P03881	472 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	RAD3	P06839	778 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	RPL4A	P10664	362 aa	Known RBP	0.21	□□□□□ -2.38
CSE2	YNR010W	SEC22	P22214	214 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	POF1	P25576	258 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	PEX3	P28795	441 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	RIP-Chip
CSE2	YNR010W	YIA6	P40556	373 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	PRM10	P42946	383 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	RPL37A	P49166	88 aa	Known RBP	0.21	□□□□□ -2.38
CSE2	YNR010W	RPL4B	P49626	362 aa	Known RBP	0.21	□□□□□ -2.38
CSE2	YNR010W	YGL185C	P53100	379 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	YLR297W	Q05899	129 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	SFH1	Q06168	426 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	not detected
CSE2	YNR010W	ATO3	Q12359	275 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	YOS9	Q99220	542 aa		0.21	□□□□□ -2.38
CSE2	YNR010W	RPC40	P07703	335 aa	Known RBP	0.2	□□□□□ -2.38
CSE2	YNR010W	PET18	P25362	215 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	SWI3	P32591	825 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	RCN1	P36054	211 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	TCD1	P38756	429 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	YHR125W	P38831	101 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	YHR180W	P38868	163 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	PRM9	P39551	298 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	AVT2	P39981	480 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	VTC1	P40046	129 aa	RIP-Chip data	0.2	□□□□□ -2.38	not detected
CSE2	YNR010W	YNL050C	P53952	270 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	RRG8	Q06109	277 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	AKR2	Q12013	749 aa		0.2	□□□□□ -2.38
CSE2	YNR010W	SWI1	P09547	1314 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	FRS2	P15625	503 aa	Known RBP	0.19	□□□□□ -2.38
CSE2	YNR010W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.19	□□□□□ -2.38	not detected
CSE2	YNR010W	SHC1	P39000	512 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	RPL13B	P40212	199 aa	Known RBP	0.19	□□□□□ -2.38
CSE2	YNR010W	LSB1	P53281	241 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	YDR286C	Q05530	114 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	SLD7	Q08457	257 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	BBP1	Q12365	385 aa		0.19	□□□□□ -2.38
CSE2	YNR010W	RPL13A	Q12690	199 aa	Predicted RBP	0.19	□□□□□ -2.38
CSE2	YNR010W	VAR1	P02381	398 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	CWP1	P28319	239 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	EHD3	P28817	500 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	OAC1	P32332	324 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	MSA2	P36157	363 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	HIS2	P38635	335 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	PEX18	P38855	283 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	VPS45	P38932	577 aa		0.18	□□□□□ -2.38
CSE2	YNR010W	ARC15	P40518	154 aa	RIP-Chip data	0.18	□□□□□ -2.38	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms