RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YNR064CP53750 290 aa6.48□□□□□ -1.37
NUP53YMR153W YLR152CP54072 576 aa6.48□□□□□ -1.37
NUP53YMR153W TLG1Q03322 224 aa6.48□□□□□ -1.37
NUP53YMR153W ISA2Q12425 185 aa6.48□□□□□ -1.37
NUP53YMR153W RPL15AP05748 204 aaKnown RBP6.47□□□□□ -1.37
NUP53YMR153W THI2P38141 450 aa6.47□□□□□ -1.37
NUP53YMR153W PEX32P38292 413 aa6.47□□□□□ -1.37
NUP53YMR153W SGN1P40561 250 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
NUP53YMR153W YIP4P53093 235 aa6.47□□□□□ -1.37
NUP53YMR153W SLI1P53304 468 aa6.47□□□□□ -1.37
NUP53YMR153W RPL15BP54780 204 aaPredicted RBP6.47□□□□□ -1.37
NUP53YMR153W YDR114CQ04597 100 aa6.47□□□□□ -1.37
NUP53YMR153W RFU1Q08003 200 aa6.47□□□□□ -1.37
NUP53YMR153W GSH2Q08220 491 aa6.47□□□□□ -1.37
NUP53YMR153W THP3Q12049 470 aaKnown RBP6.47□□□□□ -1.37
NUP53YMR153W ERP4Q12450 207 aa6.47□□□□□ -1.37
NUP53YMR153W REC114P32841 428 aa6.46□□□□□ -1.38
NUP53YMR153W VMA11P32842 164 aa6.46□□□□□ -1.38
NUP53YMR153W BAP2P38084 609 aa6.46□□□□□ -1.38
NUP53YMR153W TCM62P38228 572 aaKnown RBP6.46□□□□□ -1.38
NUP53YMR153W CIN2P46670 268 aa6.46□□□□□ -1.38
NUP53YMR153W HHT1P61830 136 aa6.46□□□□□ -1.38
NUP53YMR153W YDR248CQ03786 193 aa6.46□□□□□ -1.38
NUP53YMR153W TSR2Q06672 205 aaKnown RBP6.46□□□□□ -1.38
NUP53YMR153W IRC25Q07951 179 aa6.46□□□□□ -1.38
NUP53YMR153W FCY22Q12119 530 aa6.46□□□□□ -1.38
NUP53YMR153W YOL114CQ12322 202 aa6.46□□□□□ -1.38
NUP53YMR153W YPR1Q12458 312 aa6.46□□□□□ -1.38
NUP53YMR153W SAG1P20840 650 aa6.45□□□□□ -1.38
NUP53YMR153W FUN26P31381 517 aa6.45□□□□□ -1.38
NUP53YMR153W AFG1P32317 509 aa6.45□□□□□ -1.38
NUP53YMR153W MSS2P40990 351 aa6.45□□□□□ -1.38
NUP53YMR153W YGL159WP53110 370 aa6.45□□□□□ -1.38
NUP53YMR153W DUG3P53871 357 aa6.45□□□□□ -1.38
NUP53YMR153W RNH201P53942 307 aa6.45□□□□□ -1.38
NUP53YMR153W YKR005CQ02203 525 aa6.45□□□□□ -1.38
NUP53YMR153W FRE3Q08905 711 aa6.45□□□□□ -1.38
NUP53YMR153W FRE5Q08908 694 aa6.45□□□□□ -1.38
NUP53YMR153W TGS1Q12052 315 aa6.45□□□□□ -1.38
NUP53YMR153W MED11Q99278 115 aa6.45□□□□□ -1.38
NUP53YMR153W YER145C-AA0A023PYF4 145 aa6.44□□□□□ -1.38
NUP53YMR153W APA2P22108 325 aa6.44□□□□□ -1.38
NUP53YMR153W SSH1P38353 490 aaKnown RBP6.44□□□□□ -1.38
NUP53YMR153W SLM1P40485 686 aa6.44□□□□□ -1.38
NUP53YMR153W PMT6P42934 759 aa6.44□□□□□ -1.38
NUP53YMR153W AVT4P50944 713 aa6.44□□□□□ -1.38
NUP53YMR153W GEP7P53171 287 aa6.44□□□□□ -1.38
NUP53YMR153W PAU12P53343 120 aa6.44□□□□□ -1.38
NUP53YMR153W PRM15Q03262 622 aa6.44□□□□□ -1.38
NUP53YMR153W RIM9Q04734 239 aa6.44□□□□□ -1.38
NUP53YMR153W YMR252CQ04814 134 aa6.44□□□□□ -1.38
NUP53YMR153W LUC7Q07508 261 aaPredicted RBP6.44□□□□□ -1.38
NUP53YMR153W TRM10Q12400 293 aa6.44□□□□□ -1.38
NUP53YMR153W SGA1P08019 549 aa6.43□□□□□ -1.38
NUP53YMR153W MDH1P17505 334 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
NUP53YMR153W VPS17P32913 551 aa6.43□□□□□ -1.38
NUP53YMR153W YER079WP40052 210 aaKnown RBP6.43□□□□□ -1.38
NUP53YMR153W PDS1P40316 373 aaPredicted RBP6.43□□□□□ -1.38
NUP53YMR153W NTA1P40354 457 aa6.43□□□□□ -1.38
NUP53YMR153W PAM16P42949 149 aa6.43□□□□□ -1.38
NUP53YMR153W ERJ5P43613 295 aaPredicted RBP6.43□□□□□ -1.38
NUP53YMR153W PHB2P50085 310 aa6.43□□□□□ -1.38
NUP53YMR153W FRE6Q12473 712 aa6.43□□□□□ -1.38
NUP53YMR153W TDH2P00358 332 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W MRPS28P21771 286 aa6.42□□□□□ -1.38
NUP53YMR153W TIF3P34167 436 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W MTC2P34246 357 aa6.42□□□□□ -1.38
NUP53YMR153W MTH1P35198 433 aa6.42□□□□□ -1.38
NUP53YMR153W PAU24P38155 120 aa6.42□□□□□ -1.38
NUP53YMR153W TIF11P38912 153 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W RMD6P39975 231 aa6.42□□□□□ -1.38
NUP53YMR153W YND1P40009 630 aa6.42□□□□□ -1.38
NUP53YMR153W LYS20P48570 428 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W TAF4P50105 388 aa6.42□□□□□ -1.38
NUP53YMR153W NSA1P53136 463 aaPredicted RBP6.42□□□□□ -1.38
NUP53YMR153W APJ1P53940 528 aa6.42□□□□□ -1.38
NUP53YMR153W ASR1Q06834 288 aa6.42□□□□□ -1.38
NUP53YMR153W PRP11Q07350 266 aaPredicted RBP6.42□□□□□ -1.38
NUP53YMR153W LYS21Q12122 440 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W YDL009CQ12210 107 aa6.42□□□□□ -1.38
NUP53YMR153W MRP1P10662 321 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W PPZ2P33329 710 aa6.42□□□□□ -1.38
NUP53YMR153W YOX1P34161 385 aa6.42□□□□□ -1.38
NUP53YMR153W NAT2P37293 288 aa6.42□□□□□ -1.38
NUP53YMR153W GPI18P38211 433 aa6.42□□□□□ -1.38
NUP53YMR153W SDS24P38314 527 aa6.42□□□□□ -1.38
NUP53YMR153W NVJ1P38881 321 aa6.42□□□□□ -1.38
NUP53YMR153W GZF3P42944 551 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W GON7P46984 123 aa6.42□□□□□ -1.38
NUP53YMR153W YJR120WP47157 116 aa6.42□□□□□ -1.38
NUP53YMR153W PMT5P52867 743 aa6.42□□□□□ -1.38
NUP53YMR153W ARG5,6Q01217 863 aa6.42□□□□□ -1.38
NUP53YMR153W YPL067CQ02754 198 aa6.42□□□□□ -1.38
NUP53YMR153W CAC2Q04199 468 aa6.42□□□□□ -1.38
NUP53YMR153W HLR1Q04429 423 aa6.42□□□□□ -1.38
NUP53YMR153W MRX10Q05648 414 aa6.42□□□□□ -1.38
NUP53YMR153W PEX30Q06169 523 aa6.42□□□□□ -1.38
NUP53YMR153W NMA1Q06178 401 aaKnown RBP6.42□□□□□ -1.38
NUP53YMR153W PIN3Q06449 215 aa6.42□□□□□ -1.38
NUP53YMR153W TY1A-NL1Q12391 440 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms