RNA–Protein interactions for RNA: YLR405W

DUS4, Transcript of Dihydrouridine synthase, yeast

Gene DUS4, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUS4	YLR405W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.69	□□□□□ -1.5
DUS4	YLR405W	NUM1	Q00402	2748 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	HIP1	P06775	603 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	RPB3	P16370	318 aa	Known RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	MRPL44	P19956	98 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	GPI12	P23797	304 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	ERG4	P25340	473 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	TIP1	P27654	210 aa	Predicted RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	CNE1	P27825	502 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	ERG24	P32462	438 aa	Known RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	YNK1	P36010	153 aa	Known RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	DOA1	P36037	715 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	FAA3	P39002	694 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	ICE2	P40499	491 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	VMA21	P41806	77 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	OYE3	P41816	400 aa	Predicted RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	AGX1	P43567	385 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	SFH5	P47008	294 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	DAN1	P47178	298 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	YGL117W	P53133	265 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	PKP2	P53170	491 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	TYW3	P53177	273 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	YGR042W	P53227	271 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	AAH1	P53909	347 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	INP1	Q03694	420 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	MTQ2	Q03920	221 aa	Predicted RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	YML096W	Q04489	525 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	SNO4	Q04902	237 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	BER1	Q06688	274 aa	Known RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	LUC7	Q07508	261 aa	Predicted RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	PML1	Q07930	204 aa	Predicted RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	HSP33	Q08914	237 aa	Known RBP	5.68	□□□□□ -1.5
DUS4	YLR405W	HSP32	Q08992	237 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	PUS9	Q12069	462 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	YDL211C	Q12121	372 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	MSB2	P32334	1306 aa		5.68	□□□□□ -1.5
DUS4	YLR405W	TDH2	P00358	332 aa	Known RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	YML003W	P0CF16	290 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	UBI4	P0CG63	381 aa	Known RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	RPL40A	P0CH08	128 aa	Known RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	RPL40B	P0CH09	128 aa	Known RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	YPK2	P18961	677 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	PBN1	P25580	416 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	SUI1	P32911	108 aa	Known RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	ECM15	P35195	104 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	MIA40	P36046	403 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	SDH4	P37298	181 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	YPC1	P38298	316 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	PUG1	P40100	303 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	YJR141W	P47172	347 aa	Predicted RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	SOL1	P50278	321 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	TIM21	P53220	239 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	YNR062C	P53748	327 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	GIM3	P53900	129 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	MRPS17	Q03246	237 aa	Predicted RBP	5.67	□□□□□ -1.5
DUS4	YLR405W	TPP1	Q03796	238 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	FIT1	Q04433	528 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	HOF1	Q05080	669 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	YOR365C	Q08844	703 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	MMT2	Q08970	484 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	YIL002W-A	Q3E7Z5	69 aa		5.67	□□□□□ -1.5
DUS4	YLR405W	SEC59	P20048	519 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	POF1	P25576	258 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	FUN19	P28003	413 aa	Predicted RBP	5.66	□□□□□ -1.5
DUS4	YLR405W	FAA1	P30624	700 aa	Known RBP	5.66	□□□□□ -1.5
DUS4	YLR405W	PRE2	P30656	287 aa	Known RBP	5.66	□□□□□ -1.5
DUS4	YLR405W	SRB5	P32585	307 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	CLB6	P32943	380 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	MSN4	P33749	630 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	BET3	P36149	193 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	MAL32	P38158	584 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	EHT1	P38295	451 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	VPS52	P39904	641 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	MOB1	P40484	314 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	YIL060W	P40519	144 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	NIT2	P47016	307 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	TAX4	P47030	604 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	PUS4	P48567	403 aa	Known RBP	5.66	□□□□□ -1.5
DUS4	YLR405W	PNC1	P53184	216 aa	Known RBP	5.66	□□□□□ -1.5
DUS4	YLR405W	MAL12	P53341	584 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	GPI15	P53961	229 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	EST3	Q03096	181 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	SPC19	Q03954	165 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	YDR387C	Q04162	555 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	SMA2	Q04658	369 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	THI73	Q07904	523 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	AHC1	Q12433	566 aa		5.66	□□□□□ -1.5
DUS4	YLR405W	INH1	P01097	85 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	GAL4	P04386	881 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	ADH3	P07246	375 aa	Known RBP	5.65	□□□□□ -1.5
DUS4	YLR405W	HNM1	P19807	563 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	AFR1	P33304	620 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	YBR013C	P38215	129 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	SHG1	P38337	142 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	SMB1	P40018	196 aa	Known RBP	5.65	□□□□□ -1.5
DUS4	YLR405W	OSW5	P40219	148 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	LYS20	P48570	428 aa	Known RBP	5.65	□□□□□ -1.5
DUS4	YLR405W	YHM2	Q04013	314 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	YMR253C	Q04835	414 aa		5.65	□□□□□ -1.5
DUS4	YLR405W	DAL4	Q04895	635 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms