RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W CTK1Q03957 528 aaKnown RBP4.8□□□□□ -1.64
PWP1YLR196W CNL1Q06333 122 aa4.8□□□□□ -1.64
PWP1YLR196W ENT4Q07872 247 aa4.8□□□□□ -1.64
PWP1YLR196W ENV7Q12003 364 aa4.8□□□□□ -1.64
PWP1YLR196W PST1Q12355 444 aa4.8□□□□□ -1.64
PWP1YLR196W RKM5Q12367 367 aa4.8□□□□□ -1.64
PWP1YLR196W TFB5Q3E7C1 72 aaPredicted RBP4.8□□□□□ -1.64
PWP1YLR196W THP2O13539 261 aaKnown RBP4.8□□□□□ -1.64
PWP1YLR196W HAP3P13434 144 aa4.8□□□□□ -1.64
PWP1YLR196W ATP10P18496 279 aa4.8□□□□□ -1.64
PWP1YLR196W PET18P25362 215 aa4.8□□□□□ -1.64
PWP1YLR196W URA10P30402 227 aa4.8□□□□□ -1.64
PWP1YLR196W SNC1P31109 117 aa4.8□□□□□ -1.64
PWP1YLR196W MET22P32179 357 aa4.8□□□□□ -1.64
PWP1YLR196W SHE2P36068 246 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
PWP1YLR196W DOG2P38773 246 aa4.8□□□□□ -1.64
PWP1YLR196W SSN3P39073 555 aa4.8□□□□□ -1.64
PWP1YLR196W PHO90P39535 881 aa4.8□□□□□ -1.64
PWP1YLR196W YER158CP40095 573 aa4.8□□□□□ -1.64
PWP1YLR196W RIB4P50861 169 aaPredicted RBP4.8□□□□□ -1.64
PWP1YLR196W YGL114WP53134 725 aa4.8□□□□□ -1.64
PWP1YLR196W APS2Q00381 147 aa4.8□□□□□ -1.64
PWP1YLR196W TMA23Q03525 211 aa4.8□□□□□ -1.64
PWP1YLR196W CCE1Q03702 353 aa4.8□□□□□ -1.64
PWP1YLR196W UPS3Q04006 179 aa4.8□□□□□ -1.64
PWP1YLR196W DAL4Q04895 635 aa4.8□□□□□ -1.64
PWP1YLR196W SHS1Q07657 551 aa4.8□□□□□ -1.64
PWP1YLR196W GUD1Q07729 489 aa4.8□□□□□ -1.64
PWP1YLR196W RAD28Q12021 506 aa4.8□□□□□ -1.64
PWP1YLR196W YLL056CQ12177 298 aa4.8□□□□□ -1.64
PWP1YLR196W ATG5Q12380 294 aa4.8□□□□□ -1.64
PWP1YLR196W TRM10Q12400 293 aa4.8□□□□□ -1.64
PWP1YLR196W YDL199CQ12407 687 aa4.8□□□□□ -1.64
PWP1YLR196W YMR030W-AQ3E760 96 aa4.8□□□□□ -1.64
PWP1YLR196W SGA1P08019 549 aa4.79□□□□□ -1.64
PWP1YLR196W TIR1P10863 254 aa4.79□□□□□ -1.64
PWP1YLR196W MCK1P21965 375 aaKnown RBP4.79□□□□□ -1.64
PWP1YLR196W NFS1P25374 497 aa4.79□□□□□ -1.64
PWP1YLR196W YOR062CP36025 268 aa4.79□□□□□ -1.64
PWP1YLR196W FLO10P36170 1169 aa4.79□□□□□ -1.64
PWP1YLR196W MIC12P38341 106 aa4.79□□□□□ -1.64
PWP1YLR196W YHL044WP38727 235 aa4.79□□□□□ -1.64
PWP1YLR196W CHS7P38843 316 aa4.79□□□□□ -1.64
PWP1YLR196W PNT1P38969 423 aa4.79□□□□□ -1.64
PWP1YLR196W SCD6P45978 349 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
PWP1YLR196W EXG2P52911 562 aa4.79□□□□□ -1.64
PWP1YLR196W YVH1Q02256 364 aaKnown RBP4.79□□□□□ -1.64
PWP1YLR196W BNA5Q05979 453 aa4.79□□□□□ -1.64
PWP1YLR196W RRG8Q06109 277 aa4.79□□□□□ -1.64
PWP1YLR196W COQ10Q08058 207 aa4.79□□□□□ -1.64
PWP1YLR196W IRC13Q08630 104 aa4.79□□□□□ -1.64
PWP1YLR196W UPC2Q12151 913 aa4.79□□□□□ -1.64
PWP1YLR196W YDL177CQ12257 170 aa4.79□□□□□ -1.64
PWP1YLR196W RGT2Q12300 763 aa4.79□□□□□ -1.64
PWP1YLR196W GEP5Q12393 293 aa4.79□□□□□ -1.64
PWP1YLR196W YPR145C-AQ2V2P0 78 aa4.79□□□□□ -1.64
PWP1YLR196W COA6Q3E846 104 aa4.79□□□□□ -1.64
PWP1YLR196W CAR1P00812 333 aaKnown RBP4.78□□□□□ -1.64
PWP1YLR196W AAC1P04710 309 aa4.78□□□□□ -1.64
PWP1YLR196W CYC3P06182 269 aa4.78□□□□□ -1.64
PWP1YLR196W HVG1P0CE11 249 aa4.78□□□□□ -1.64
PWP1YLR196W YER190C-BP0CX94 160 aa4.78□□□□□ -1.64
PWP1YLR196W YEL077W-AP0CX95 160 aa4.78□□□□□ -1.64
PWP1YLR196W YGR296C-BP0CX96 160 aa4.78□□□□□ -1.64
PWP1YLR196W YPL283W-BP0CX97 160 aa4.78□□□□□ -1.64
PWP1YLR196W YPR204C-AP0CX98 160 aa4.78□□□□□ -1.64
PWP1YLR196W SPT15P13393 240 aaKnown RBP4.78□□□□□ -1.64
PWP1YLR196W PHO80P20052 293 aa4.78□□□□□ -1.64
PWP1YLR196W RPB5P20434 215 aa4.78□□□□□ -1.64
PWP1YLR196W ARP2P32381 391 aaKnown RBP4.78□□□□□ -1.64
PWP1YLR196W MKK2P32491 506 aa4.78□□□□□ -1.64
PWP1YLR196W ASH1P34233 588 aa4.78□□□□□ -1.64
PWP1YLR196W MCR1P36060 302 aaKnown RBP4.78□□□□□ -1.64
PWP1YLR196W OMA1P36163 345 aa4.78□□□□□ -1.64
PWP1YLR196W CBP4P37267 147 aa4.78□□□□□ -1.64
PWP1YLR196W VID24P38263 362 aa4.78□□□□□ -1.64
PWP1YLR196W ATG12P38316 186 aa4.78□□□□□ -1.64
PWP1YLR196W DBP8P38719 431 aa4.78□□□□□ -1.64
PWP1YLR196W PPE1P38796 400 aa4.78□□□□□ -1.64
PWP1YLR196W YNL194CP40169 301 aa4.78□□□□□ -1.64
PWP1YLR196W SNM1P40993 198 aa4.78□□□□□ -1.64
PWP1YLR196W YFL054CP43549 646 aa4.78□□□□□ -1.64
PWP1YLR196W RPA43P46669 326 aa4.78□□□□□ -1.64
PWP1YLR196W ROG1P53118 685 aa4.78□□□□□ -1.64
PWP1YLR196W YNR014WP53719 212 aa4.78□□□□□ -1.64
PWP1YLR196W RHO5P53879 331 aaKnown RBP4.78□□□□□ -1.64
PWP1YLR196W TEN1Q07921 160 aa4.78□□□□□ -1.64
PWP1YLR196W AIM39Q08223 395 aa4.78□□□□□ -1.64
PWP1YLR196W VMA9Q3E7B6 73 aa4.78□□□□□ -1.64
PWP1YLR196W VAR1P02381 398 aa4.77□□□□□ -1.65
PWP1YLR196W YPR170W-BP0C5R9 85 aa4.77□□□□□ -1.65
PWP1YLR196W TRR1P29509 319 aaKnown RBP4.77□□□□□ -1.65
PWP1YLR196W UTR2P32623 467 aa4.77□□□□□ -1.65
PWP1YLR196W SRY1P36007 326 aa4.77□□□□□ -1.65
PWP1YLR196W ADD66P36040 267 aa4.77□□□□□ -1.65
PWP1YLR196W TRM7P38238 310 aaKnown RBP4.77□□□□□ -1.65
PWP1YLR196W AVT2P39981 480 aa4.77□□□□□ -1.65
PWP1YLR196W IME4P41833 600 aa4.77□□□□□ -1.65
PWP1YLR196W CHA4P43634 648 aa4.77□□□□□ -1.65
PWP1YLR196W RMD9P53140 646 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms