RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	ACC1	Q00955	2233 aa	Known RBP	3.38	□□□□□ -1.87
LOS1	YKL205W	YAL064W-B	O13512	126 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	SEN2	P16658	377 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	APE4	P38821	490 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	REE1	P40893	198 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	ERJ5	P43613	295 aa	Predicted RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	LOH1	P47055	219 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	SHE4	P51534	789 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	PEF1	P53238	335 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	YDC1	Q02896	317 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	GRC3	Q07845	632 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	RPL15A	P05748	204 aa	Known RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	SPS2	P08459	502 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	SPT10	P35208	640 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
LOS1	YKL205W	APL3	P38065	1025 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	MIT1	P40002	666 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	YIL165C	P40446	119 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	MOB2	P43563	287 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	EFM3	P47163	339 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	YGL159W	P53110	370 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	RPL15B	P54780	204 aa	Predicted RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	KAP120	Q02932	1032 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	FIN1	Q03898	291 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	UPS1	Q05776	175 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	INP53	Q12271	1107 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
LOS1	YKL205W	RAD51	P25454	400 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	FPR2	P32472	135 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	SNC2	P33328	115 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	FRM2	P37261	193 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	IRC18	P47056	224 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	AAH1	P53909	347 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	ASI3	P53983	676 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	DIG2	Q03373	323 aa	Known RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	YPL272C	Q08984	517 aa		3.37	□□□□□ -1.87
LOS1	YKL205W	YOR283W	Q12040	230 aa	Known RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	PRP46	Q12417	451 aa	Predicted RBP	3.37	□□□□□ -1.87
LOS1	YKL205W	MDH2	P22133	377 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	TMA19	P35691	167 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	TOK1	P40310	691 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YIL029C	P40538	142 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	OST1	P41543	476 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	SFH5	P47008	294 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	DPB11	P47027	764 aa	Predicted RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	POP6	P53218	158 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YNR048W	P53740	393 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	GAT3	Q07928	141 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	SRL2	Q12020	392 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
LOS1	YKL205W	YER145C-A	A0A023PYF4	145 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	SGA1	P08019	549 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YMR31	P19955	123 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	PET18	P25362	215 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	IPI1	P38803	334 aa	Predicted RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	RPL13B	P40212	199 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	SSN8	P47821	323 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	RCE1	Q03530	315 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	PEX10	Q05568	337 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	PRS5	Q12265	496 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	RPL13A	Q12690	199 aa	Predicted RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	SUS1	Q6WNK7	96 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	GCD1	P09032	578 aa	Predicted RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	ACH1	P32316	526 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	CDC3	P32457	520 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	YUH1	P35127	236 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	BMT5	P40493	336 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	SER2	P42941	309 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	SRP1	Q02821	542 aa	Known RBP	3.36	□□□□□ -1.87
LOS1	YKL205W	YAP6	Q03935	383 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	AGE1	Q04412	482 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YDR286C	Q05530	114 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	NNT1	Q05874	261 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	RSC58	Q07979	502 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	HRT1	Q08273	121 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	COX17	Q12287	69 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	DGK1	Q12382	290 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YDL007C-A	Q2V2Q0	85 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	BOL1	Q3E793	110 aa		3.36	□□□□□ -1.87
LOS1	YKL205W	YFR010W-A	P0C5N0	62 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	PET122	P10355	254 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	ERG9	P29704	444 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	FUN26	P31381	517 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	YFL066C	P43538	392 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	ATG18	P43601	500 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	TYW3	P53177	273 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	HEM25	Q07534	307 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	YDL218W	Q07629	317 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	YBL029C-A	Q3E756	94 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	MES1	P00958	751 aa	Known RBP	3.35	□□□□□ -1.87
LOS1	YKL205W	CDC9	P04819	755 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	PDA1	P16387	420 aa	Known RBP	3.35	□□□□□ -1.87
LOS1	YKL205W	SIP1	P32578	815 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	YKE4	P40544	346 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	GPP1	P41277	250 aa	Known RBP	3.35	□□□□□ -1.87
LOS1	YKL205W	GPI14	P47088	403 aa	Known RBP	3.35	□□□□□ -1.87
LOS1	YKL205W	DOC1	P53068	250 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	YMR254C	Q04838	102 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	SCM3	Q12334	223 aa		3.35	□□□□□ -1.87
LOS1	YKL205W	TIM9	O74700	87 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms