RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C TY3A-IQ99219 290 aa1.06□□□□□ -2.24
RTR1YER139C PAN1P32521 1480 aa1.05□□□□□ -2.24
RTR1YER139C VPS3P23643 1011 aa1.05□□□□□ -2.24
RTR1YER139C PPA2P28239 310 aa1.05□□□□□ -2.24
RTR1YER139C CAM1P29547 415 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C CLB6P32943 380 aa1.05□□□□□ -2.24
RTR1YER139C DRE2P36152 348 aa1.05□□□□□ -2.24
RTR1YER139C SHC1P39000 512 aa1.05□□□□□ -2.24
RTR1YER139C FMC1P40491 155 aa1.05□□□□□ -2.24
RTR1YER139C OST3P48439 350 aa1.05□□□□□ -2.24
RTR1YER139C FMP41P53889 259 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C TRM44Q02648 567 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C YPL039WQ03080 316 aa1.05□□□□□ -2.24
RTR1YER139C GRH1Q04410 372 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C COX20Q04935 205 aa1.05□□□□□ -2.24
RTR1YER139C CTS2Q06350 511 aa1.05□□□□□ -2.24
RTR1YER139C PAM18Q07914 168 aa1.05□□□□□ -2.24
RTR1YER139C YOR283WQ12040 230 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C CFT1Q06632 1357 aaKnown RBP1.05□□□□□ -2.24
RTR1YER139C YAL064W-BO13512 126 aa1.04□□□□□ -2.24
RTR1YER139C RPB4P20433 221 aaPredicted RBP1.04□□□□□ -2.24
RTR1YER139C CWP1P28319 239 aa1.04□□□□□ -2.24
RTR1YER139C PEX3P28795 441 aa1.04□□□□□ -2.24
RTR1YER139C CSG2P35206 410 aa1.04□□□□□ -2.24
RTR1YER139C ARN2P38724 620 aa1.04□□□□□ -2.24
RTR1YER139C DDI1P40087 428 aa1.04□□□□□ -2.24
RTR1YER139C MNN5P46982 586 aa1.04□□□□□ -2.24
RTR1YER139C FMP33P46998 180 aa1.04□□□□□ -2.24
RTR1YER139C YJR012CP47087 207 aa1.04□□□□□ -2.24
RTR1YER139C IBA57P47158 497 aa1.04□□□□□ -2.24
RTR1YER139C ASI3P53983 676 aa1.04□□□□□ -2.24
RTR1YER139C OST6Q03723 332 aa1.04□□□□□ -2.24
RTR1YER139C FCF1Q05498 189 aaPredicted RBP1.04□□□□□ -2.24
RTR1YER139C SPO77Q06134 477 aa1.04□□□□□ -2.24
RTR1YER139C SFH1Q06168 426 aa1.04□□□□□ -2.24
RTR1YER139C SEC10Q06245 871 aa1.04□□□□□ -2.24
RTR1YER139C SUE1Q06524 206 aa1.04□□□□□ -2.24
RTR1YER139C RRS1Q08746 203 aaKnown RBP1.04□□□□□ -2.24
RTR1YER139C SMT3Q12306 101 aaKnown RBP1.04□□□□□ -2.24
RTR1YER139C SNU23Q12368 194 aaPredicted RBP1.04□□□□□ -2.24
RTR1YER139C YBL112CQ3E7Y4 105 aa1.04□□□□□ -2.24
RTR1YER139C SAC3P46674 1301 aa1.04□□□□□ -2.24
RTR1YER139C RPS3P05750 240 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C RAD10P06838 210 aa1.03□□□□□ -2.24
RTR1YER139C MSF1P08425 469 aa1.03□□□□□ -2.24
RTR1YER139C NHP6BP11633 99 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C FRS2P15625 503 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C POL30P15873 258 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C RPL24BP24000 155 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C DOA4P32571 926 aa1.03□□□□□ -2.24
RTR1YER139C YKT6P36015 200 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C PRS4P38063 326 aaPredicted RBP1.03□□□□□ -2.24
RTR1YER139C HMT1P38074 348 aa1.03□□□□□ -2.24
RTR1YER139C CUE1P38428 203 aa1.03□□□□□ -2.24
RTR1YER139C BIG1P38813 335 aa1.03□□□□□ -2.24
RTR1YER139C PRM9P39551 298 aa1.03□□□□□ -2.24
RTR1YER139C THO1P40040 218 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C YER085CP40058 173 aa1.03□□□□□ -2.24
RTR1YER139C RTR1P40084 226 aaPredicted RBP1.03□□□□□ -2.24
RTR1YER139C COA1P40452 197 aa1.03□□□□□ -2.24
RTR1YER139C GCN20P43535 752 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C SLX9P53251 210 aaPredicted RBP1.03□□□□□ -2.24
RTR1YER139C GIM3P53900 129 aa1.03□□□□□ -2.24
RTR1YER139C TIM11P81449 96 aaPredicted RBP1.03□□□□□ -2.24
RTR1YER139C YMR166CQ03829 368 aa1.03□□□□□ -2.24
RTR1YER139C BNA7Q04066 261 aa1.03□□□□□ -2.24
RTR1YER139C VBA1Q04301 562 aa1.03□□□□□ -2.24
RTR1YER139C KRE28Q04431 385 aa1.03□□□□□ -2.24
RTR1YER139C MYO5Q04439 1219 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C PEX10Q05568 337 aa1.03□□□□□ -2.24
RTR1YER139C BOP2Q06150 570 aa1.03□□□□□ -2.24
RTR1YER139C LOA1Q06508 300 aa1.03□□□□□ -2.24
RTR1YER139C SDO1Q07953 250 aaKnown RBP1.03□□□□□ -2.24
RTR1YER139C PLB3Q08108 686 aa1.03□□□□□ -2.24
RTR1YER139C YOR029WQ12243 111 aa1.03□□□□□ -2.24
RTR1YER139C SEY1Q99287 776 aa1.03□□□□□ -2.24
RTR1YER139C COX2P00410 251 aa1.02□□□□□ -2.25
RTR1YER139C RPL26AP05743 127 aaKnown RBP1.02□□□□□ -2.25
RTR1YER139C RPL4AP10664 362 aaKnown RBP1.02□□□□□ -2.25
RTR1YER139C TOM40P23644 387 aaKnown RBP1.02□□□□□ -2.25
RTR1YER139C RNA15P25299 296 aaPredicted RBP1.02□□□□□ -2.25
RTR1YER139C POF1P25576 258 aa1.02□□□□□ -2.25
RTR1YER139C SSO1P32867 290 aa1.02□□□□□ -2.25
RTR1YER139C MRPL39P36533 70 aa1.02□□□□□ -2.25
RTR1YER139C MAL32P38158 584 aa1.02□□□□□ -2.25
RTR1YER139C FZO1P38297 855 aa1.02□□□□□ -2.25
RTR1YER139C TEM1P38987 245 aa1.02□□□□□ -2.25
RTR1YER139C COX15P40086 486 aa1.02□□□□□ -2.25
RTR1YER139C SER33P40510 469 aa1.02□□□□□ -2.25
RTR1YER139C DSN1P40568 576 aa1.02□□□□□ -2.25
RTR1YER139C GON7P46984 123 aa1.02□□□□□ -2.25
RTR1YER139C YJR146WP47174 117 aa1.02□□□□□ -2.25
RTR1YER139C RPL4BP49626 362 aaKnown RBP1.02□□□□□ -2.25
RTR1YER139C NIF3P53081 288 aa1.02□□□□□ -2.25
RTR1YER139C RPL26BP53221 127 aaKnown RBP1.02□□□□□ -2.25
RTR1YER139C MAL12P53341 584 aa1.02□□□□□ -2.25
RTR1YER139C PGA2P53903 129 aa1.02□□□□□ -2.25
RTR1YER139C SRL4Q03085 281 aa1.02□□□□□ -2.25
RTR1YER139C SDC1Q03323 175 aa1.02□□□□□ -2.25
RTR1YER139C EBS1Q03466 884 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms