RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MDM34P53083 459 aa1.29□□□□□ -2.2
SNU56YDR240C BCP1Q06338 283 aa1.29□□□□□ -2.2
SNU56YDR240C CUR1Q06469 252 aa1.29□□□□□ -2.2
SNU56YDR240C PST1Q12355 444 aa1.29□□□□□ -2.2
SNU56YDR240C AI5_BETAQ9ZZX0 354 aa1.29□□□□□ -2.2
SNU56YDR240C RPL4AP10664 362 aaKnown RBP1.28□□□□□ -2.2
SNU56YDR240C MAL32P38158 584 aa1.28□□□□□ -2.2
SNU56YDR240C ECM13P38195 257 aa1.28□□□□□ -2.2
SNU56YDR240C YHB1P39676 399 aaKnown RBP1.28□□□□□ -2.2
SNU56YDR240C RPL4BP49626 362 aaKnown RBP1.28□□□□□ -2.2
SNU56YDR240C MAL12P53341 584 aa1.28□□□□□ -2.2
SNU56YDR240C ATC1Q04005 294 aa1.28□□□□□ -2.2
SNU56YDR240C BOP2Q06150 570 aa1.28□□□□□ -2.2
SNU56YDR240C SGA1P08019 549 aa1.27□□□□□ -2.21
SNU56YDR240C POX1P13711 748 aa1.27□□□□□ -2.21
SNU56YDR240C TRX1P22217 103 aaKnown RBP1.27□□□□□ -2.21
SNU56YDR240C PRM9P39551 298 aa1.27□□□□□ -2.21
SNU56YDR240C PEP8P40335 379 aa1.27□□□□□ -2.21
SNU56YDR240C PEX31P53203 462 aa1.27□□□□□ -2.21
SNU56YDR240C CPD1P53314 239 aa1.27□□□□□ -2.21
SNU56YDR240C ABZ2Q03266 374 aa1.27□□□□□ -2.21
SNU56YDR240C SHC1P39000 512 aa1.26□□□□□ -2.21
SNU56YDR240C SER33P40510 469 aa1.26□□□□□ -2.21
SNU56YDR240C AAH1P53909 347 aa1.26□□□□□ -2.21
SNU56YDR240C PRM15Q03262 622 aa1.26□□□□□ -2.21
SNU56YDR240C VBA1Q04301 562 aa1.26□□□□□ -2.21
SNU56YDR240C SFH1Q06168 426 aa1.26□□□□□ -2.21
SNU56YDR240C MHT1Q12525 324 aa1.26□□□□□ -2.21
SNU56YDR240C CWP1P28319 239 aa1.25□□□□□ -2.21
SNU56YDR240C YER135CP40082 130 aa1.25□□□□□ -2.21
SNU56YDR240C OST2P46964 130 aa1.25□□□□□ -2.21
SNU56YDR240C TIM21P53220 239 aa1.25□□□□□ -2.21
SNU56YDR240C YNL260CP53846 198 aa1.25□□□□□ -2.21
SNU56YDR240C SPO19Q03029 223 aa1.25□□□□□ -2.21
SNU56YDR240C SLD7Q08457 257 aa1.25□□□□□ -2.21
SNU56YDR240C FRS2P15625 503 aaKnown RBP1.24□□□□□ -2.21
SNU56YDR240C CSM1P25651 190 aa1.24□□□□□ -2.21
SNU56YDR240C RSM10Q03201 203 aa1.24□□□□□ -2.21
SNU56YDR240C EMI1Q04406 187 aa1.24□□□□□ -2.21
SNU56YDR240C PER33Q12144 273 aa1.24□□□□□ -2.21
SNU56YDR240C CDC7P06243 507 aa1.24□□□□□ -2.21
SNU56YDR240C RPC40P07703 335 aaKnown RBP1.24□□□□□ -2.21
SNU56YDR240C FBA1P14540 359 aaKnown RBP1.24□□□□□ -2.21
SNU56YDR240C DOG1P38774 246 aa1.24□□□□□ -2.21
SNU56YDR240C NBP35P52920 328 aa1.24□□□□□ -2.21
SNU56YDR240C RCY1P39531 840 aa1.23□□□□□ -2.21
SNU56YDR240C SWS2P53937 143 aa1.23□□□□□ -2.21
SNU56YDR240C UGA1P17649 471 aa1.22□□□□□ -2.21
SNU56YDR240C YHL049CP38722 271 aa1.22□□□□□ -2.21
SNU56YDR240C OSW5P40219 148 aa1.22□□□□□ -2.21
SNU56YDR240C ERV41Q04651 352 aa1.22□□□□□ -2.21
SNU56YDR240C RPP0P05317 312 aaKnown RBP1.21□□□□□ -2.22
SNU56YDR240C POF1P25576 258 aa1.21□□□□□ -2.22
SNU56YDR240C PEX4P29340 183 aa1.21□□□□□ -2.22
SNU56YDR240C HEK2P38199 381 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SNU56YDR240C MNT4P53745 580 aa1.21□□□□□ -2.22
SNU56YDR240C CTF19Q02732 369 aa1.21□□□□□ -2.22
SNU56YDR240C INM2Q05533 292 aa1.21□□□□□ -2.22
SNU56YDR240C REX3Q12090 404 aa1.21□□□□□ -2.22
SNU56YDR240C EMP46Q12396 444 aa1.21□□□□□ -2.22
SNU56YDR240C STH1P32597 1359 aa1.2□□□□□ -2.22
SNU56YDR240C YOL162WP0CF19 215 aa1.2□□□□□ -2.22
SNU56YDR240C SCL1P21243 252 aaKnown RBP1.2□□□□□ -2.22
SNU56YDR240C COS8P38723 381 aa1.2□□□□□ -2.22
SNU56YDR240C ARC15P40518 154 aaRIP-Chip data1.2□□□□□ -2.22not detected
SNU56YDR240C MZM1Q03429 123 aaPredicted RBP1.2□□□□□ -2.22
SNU56YDR240C PEX10Q05568 337 aa1.2□□□□□ -2.22
SNU56YDR240C RAS2P01120 322 aaKnown RBP1.19□□□□□ -2.22
SNU56YDR240C RCN1P36054 211 aa1.19□□□□□ -2.22
SNU56YDR240C MRX5P47007 382 aa1.19□□□□□ -2.22
SNU56YDR240C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
SNU56YDR240C SME1Q12330 94 aaPredicted RBP1.19□□□□□ -2.22
SNU56YDR240C YSR3P23501 404 aa1.18□□□□□ -2.22
SNU56YDR240C KRR1P25586 316 aaPredicted RBP1.18□□□□□ -2.22
SNU56YDR240C PRS4P38063 326 aaPredicted RBP1.18□□□□□ -2.22
SNU56YDR240C HSM3P38348 480 aa1.18□□□□□ -2.22
SNU56YDR240C GCD14P46959 383 aaPredicted RBP1.18□□□□□ -2.22
SNU56YDR240C CIS3P47001 227 aa1.18□□□□□ -2.22
SNU56YDR240C YGR026WP53217 278 aa1.18□□□□□ -2.22
SNU56YDR240C ARP5P53946 755 aa1.18□□□□□ -2.22
SNU56YDR240C YMR279CQ03263 540 aa1.18□□□□□ -2.22
SNU56YDR240C ARV1Q06541 321 aa1.18□□□□□ -2.22
SNU56YDR240C MDY2Q12285 212 aa1.18□□□□□ -2.22
SNU56YDR240C Q0255P03881 472 aa1.18□□□□□ -2.22
SNU56YDR240C DSF1P0CX08 502 aa1.18□□□□□ -2.22
SNU56YDR240C YNR073CP0CX09 502 aa1.18□□□□□ -2.22
SNU56YDR240C MDH2P22133 377 aa1.18□□□□□ -2.22
SNU56YDR240C SEC22P22214 214 aa1.18□□□□□ -2.22
SNU56YDR240C MEK1P24719 497 aaPredicted RBP1.18□□□□□ -2.22
SNU56YDR240C VTC1P40046 129 aaRIP-Chip data1.18□□□□□ -2.22not detected
SNU56YDR240C SMD3P43321 101 aaKnown RBP1.18□□□□□ -2.22
SNU56YDR240C ERG25P53045 309 aa1.18□□□□□ -2.22
SNU56YDR240C PNC1P53184 216 aaKnown RBP1.18□□□□□ -2.22
SNU56YDR240C LSB1P53281 241 aa1.18□□□□□ -2.22
SNU56YDR240C CDC14Q00684 551 aa1.18□□□□□ -2.22
SNU56YDR240C MRPS8Q03799 155 aa1.18□□□□□ -2.22
SNU56YDR240C AKR2Q12013 749 aa1.18□□□□□ -2.22
SNU56YDR240C DCN1Q12395 269 aa1.18□□□□□ -2.22
SNU56YDR240C OPI1P21957 404 aa1.17□□□□□ -2.22
SNU56YDR240C MDH3P32419 343 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms