RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	YBR219C	P38317	127 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	SHC1	P39000	512 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	GLE2	P40066	365 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	KEL2	P50090	882 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	YNR062C	P53748	327 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	TRM44	Q02648	567 aa	Known RBP	0.53	□□□□□ -2.32
CSN9	YDR179C	CTF19	Q02732	369 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	MRPS8	Q03799	155 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	SEC10	Q06245	871 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	PML1	Q07930	204 aa	Predicted RBP	0.53	□□□□□ -2.32
CSN9	YDR179C	RIO1	Q12196	484 aa	Known RBP	0.53	□□□□□ -2.32
CSN9	YDR179C	NFI1	Q12216	726 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	PSY3	Q12318	242 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	ICL1	P28240	557 aa	Predicted RBP	0.52	□□□□□ -2.33
CSN9	YDR179C	UIP5	P36137	443 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	PHO88	P38264	188 aa	Predicted RBP	0.52	□□□□□ -2.33
CSN9	YDR179C	END3	P39013	349 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	PRM9	P39551	298 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	RPL13B	P40212	199 aa	Known RBP	0.52	□□□□□ -2.33
CSN9	YDR179C	CDC40	P40968	455 aa	Predicted RBP	0.52	□□□□□ -2.33
CSN9	YDR179C	YJR079W	P47126	109 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	YGR026W	P53217	278 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	ARP5	P53946	755 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	PEX10	Q05568	337 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	YLR297W	Q05899	129 aa		0.52	□□□□□ -2.33
CSN9	YDR179C	RPL13A	Q12690	199 aa	Predicted RBP	0.52	□□□□□ -2.33
CSN9	YDR179C	CAR2	P07991	424 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	RPL4A	P10664	362 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	SAR1	P20606	190 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	SWI3	P32591	825 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	YHR022C	P38763	256 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	AIM20	P40451	204 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	ARC15	P40518	154 aa	RIP-Chip data	0.51	□□□□□ -2.33	not detected
CSN9	YDR179C	RPL4B	P49626	362 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	CYT2	Q00873	224 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	YMR279C	Q03263	540 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	ATC1	Q04005	294 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	BER1	Q06688	274 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	POM33	Q12164	279 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	USB1	Q12208	290 aa	Known RBP	0.51	□□□□□ -2.33
CSN9	YDR179C	ATO3	Q12359	275 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	YOS9	Q99220	542 aa		0.51	□□□□□ -2.33
CSN9	YDR179C	RPL2A	P0CX45	254 aa	Known RBP	0.5	□□□□□ -2.33
CSN9	YDR179C	RPL2B	P0CX46	254 aa	Known RBP	0.5	□□□□□ -2.33
CSN9	YDR179C	COS8	P38723	381 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	APE4	P38821	490 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	AGP3	P43548	558 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	VOA1	P53262	265 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	RSM10	Q03201	203 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	LOA1	Q06508	300 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	CSI2	Q08054	341 aa		0.5	□□□□□ -2.33
CSN9	YDR179C	VAR1	P02381	398 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	Q0255	P03881	472 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	DDI2	P0CH63	225 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	DDI3	P0CH64	225 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	KDX1	P36005	433 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	RCN1	P36054	211 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	RCY1	P39531	840 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	SSO2	P39926	295 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	YKE4	P40544	346 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	TIM21	P53220	239 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	YGR219W	P53307	113 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	EMI1	Q04406	187 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	AKR2	Q12013	749 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	AI5_BETA	Q9ZZX0	354 aa		0.49	□□□□□ -2.33
CSN9	YDR179C	YER188C-A	P0C0V2	99 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	SMI1	P32566	505 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	UPS2	P35200	230 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	ERV15	P38312	142 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	RIB4	P50861	169 aa	Predicted RBP	0.48	□□□□□ -2.33
CSN9	YDR179C	ERV29	P53337	310 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	YLR162W	Q06235	118 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	PER33	Q12144	273 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	EMP46	Q12396	444 aa		0.48	□□□□□ -2.33
CSN9	YDR179C	CPA1	P07258	411 aa	Known RBP	0.47	□□□□□ -2.33
CSN9	YDR179C	OAC1	P32332	324 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	RPC25	P35718	212 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	HIS2	P38635	335 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	TCD1	P38756	429 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	PEX31	P53203	462 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	YMR111C	Q04461	462 aa	Predicted RBP	0.47	□□□□□ -2.33
CSN9	YDR179C	SFH1	Q06168	426 aa		0.47	□□□□□ -2.33
CSN9	YDR179C	YHR032W-A	P0C5N6	59 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	GPA2	P10823	449 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	PRS4	P38063	326 aa	Predicted RBP	0.46	□□□□□ -2.34
CSN9	YDR179C	SSH1	P38353	490 aa	Known RBP	0.46	□□□□□ -2.34
CSN9	YDR179C	SVP26	P38869	228 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	SER33	P40510	469 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	NAS2	P40555	220 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	SMD3	P43321	101 aa	Known RBP	0.46	□□□□□ -2.34
CSN9	YDR179C	CPD1	P53314	239 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	MGR3	Q04472	501 aa		0.46	□□□□□ -2.34
CSN9	YDR179C	RPL9A	P05738	191 aa	Known RBP	0.45	□□□□□ -2.34
CSN9	YDR179C	YHL049C	P38722	271 aa		0.45	□□□□□ -2.34
CSN9	YDR179C	YHR125W	P38831	101 aa		0.45	□□□□□ -2.34
CSN9	YDR179C	MNN9	P39107	395 aa	Known RBP	0.45	□□□□□ -2.34
CSN9	YDR179C	YIL001W	P40560	513 aa		0.45	□□□□□ -2.34
CSN9	YDR179C	RPL37A	P49166	88 aa	Known RBP	0.45	□□□□□ -2.34
CSN9	YDR179C	RPL9B	P51401	191 aa	Known RBP	0.45	□□□□□ -2.34
CSN9	YDR179C	RRG8	Q06109	277 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms