RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W TY1A-MR1Q04215 440 aa8.39□□□□□ -1.07
SED1YDR077W ENV7Q12003 364 aa8.39□□□□□ -1.07
SED1YDR077W FUR4P05316 633 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W GRX2P17695 143 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W AIM3P38266 947 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W MGE1P38523 228 aa8.38□□□□□ -1.07
SED1YDR077W YIL169CP40442 995 aa8.38□□□□□ -1.07
SED1YDR077W ADO1P47143 340 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W GPG1P53130 126 aa8.38□□□□□ -1.07
SED1YDR077W MTL1P53214 551 aa8.38□□□□□ -1.07
SED1YDR077W PCP1P53259 346 aa8.38□□□□□ -1.07
SED1YDR077W RSM23Q01163 450 aa8.38□□□□□ -1.07
SED1YDR077W TY1A-DR2Q03964 440 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W HRI1Q05905 244 aaKnown RBP8.38□□□□□ -1.07
SED1YDR077W ERF2Q06551 359 aa8.38□□□□□ -1.07
SED1YDR077W HEM25Q07534 307 aa8.38□□□□□ -1.07
SED1YDR077W YPL278CQ08990 100 aa8.38□□□□□ -1.07
SED1YDR077W SRL2Q12020 392 aa8.38□□□□□ -1.07
SED1YDR077W FSH3Q99369 266 aa8.38□□□□□ -1.07
SED1YDR077W CDC36P06100 191 aaPredicted RBP8.37□□□□□ -1.07
SED1YDR077W HXT2P23585 541 aa8.37□□□□□ -1.07
SED1YDR077W RNA14P25298 677 aaKnown RBP8.37□□□□□ -1.07
SED1YDR077W AFG1P32317 509 aa8.37□□□□□ -1.07
SED1YDR077W MSS1P32559 526 aaPredicted RBP8.37□□□□□ -1.07
SED1YDR077W PPG1P32838 368 aa8.37□□□□□ -1.07
SED1YDR077W UTP30P36144 274 aaKnown RBP8.37□□□□□ -1.07
SED1YDR077W MRPL39P36533 70 aa8.37□□□□□ -1.07
SED1YDR077W TAT1P38085 619 aa8.37□□□□□ -1.07
SED1YDR077W AVT7P40501 490 aa8.37□□□□□ -1.07
SED1YDR077W BLM10P43583 2143 aa8.37□□□□□ -1.07
SED1YDR077W YJL016WP47072 561 aa8.37□□□□□ -1.07
SED1YDR077W GPI14P47088 403 aaKnown RBP8.37□□□□□ -1.07
SED1YDR077W YGR042WP53227 271 aa8.37□□□□□ -1.07
SED1YDR077W YDR387CQ04162 555 aa8.37□□□□□ -1.07
SED1YDR077W COQ11Q05892 277 aa8.37□□□□□ -1.07
SED1YDR077W YLR031WQ07978 186 aa8.37□□□□□ -1.07
SED1YDR077W FRE3Q08905 711 aa8.37□□□□□ -1.07
SED1YDR077W YDL180WQ12301 547 aa8.37□□□□□ -1.07
SED1YDR077W RDI1Q12434 202 aa8.37□□□□□ -1.07
SED1YDR077W YLR358CO13565 187 aa8.36□□□□□ -1.07
SED1YDR077W MES1P00958 751 aaKnown RBP8.36□□□□□ -1.07
SED1YDR077W SGA1P08019 549 aa8.36□□□□□ -1.07
SED1YDR077W PRB1P09232 635 aa8.36□□□□□ -1.07
SED1YDR077W SED4P25365 1065 aa8.36□□□□□ -1.07
SED1YDR077W ADH7P25377 361 aa8.36□□□□□ -1.07
SED1YDR077W MOH1P38191 138 aa8.36□□□□□ -1.07
SED1YDR077W RPS26AP39938 119 aaKnown RBP8.36□□□□□ -1.07
SED1YDR077W RPS26BP39939 119 aaKnown RBP8.36□□□□□ -1.07
SED1YDR077W BXI1P48558 297 aa8.36□□□□□ -1.07
SED1YDR077W FMP48P53233 369 aa8.36□□□□□ -1.07
SED1YDR077W SOK2P53438 785 aaPredicted RBP8.36□□□□□ -1.07
SED1YDR077W YNL165WP53891 406 aa8.36□□□□□ -1.07
SED1YDR077W HNT1Q04344 158 aaKnown RBP8.36□□□□□ -1.07
SED1YDR077W YPL272CQ08984 517 aa8.36□□□□□ -1.07
SED1YDR077W ODC2Q99297 307 aa8.36□□□□□ -1.07
SED1YDR077W TDH2P00358 332 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W RPL7AP05737 244 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W RPS16AP0CX51 143 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W RPS16BP0CX52 143 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W NHP6BP11633 99 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W YCP4P25349 247 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W PET18P25362 215 aa8.35□□□□□ -1.07
SED1YDR077W MRT4P33201 236 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W VMA22P38784 181 aa8.35□□□□□ -1.07
SED1YDR077W CTK2P46962 323 aa8.35□□□□□ -1.07
SED1YDR077W MRPL50P53724 139 aa8.35□□□□□ -1.07
SED1YDR077W MRPL19P53875 158 aa8.35□□□□□ -1.07
SED1YDR077W BUD25P85052 153 aa8.35□□□□□ -1.07
SED1YDR077W RPL6AQ02326 176 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W MRP51Q02950 344 aa8.35□□□□□ -1.07
SED1YDR077W YMR265CQ03508 461 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W YLR283WQ05867 314 aa8.35□□□□□ -1.07
SED1YDR077W GAS2Q06135 555 aa8.35□□□□□ -1.07
SED1YDR077W RSC58Q07979 502 aa8.35□□□□□ -1.07
SED1YDR077W RPL7BQ12213 244 aaKnown RBP8.35□□□□□ -1.07
SED1YDR077W MCT1Q12283 360 aa8.35□□□□□ -1.07
SED1YDR077W URA6P15700 204 aa8.34□□□□□ -1.07
SED1YDR077W DIT1P21623 536 aa8.34□□□□□ -1.07
SED1YDR077W YEL057CP39983 233 aa8.34□□□□□ -1.07
SED1YDR077W BUD8P41698 603 aa8.34□□□□□ -1.07
SED1YDR077W IDP2P41939 412 aa8.34□□□□□ -1.07
SED1YDR077W OTU1P43558 301 aa8.34□□□□□ -1.07
SED1YDR077W YNR048WP53740 393 aa8.34□□□□□ -1.07
SED1YDR077W ELA1P53861 379 aaPredicted RBP8.34□□□□□ -1.07
SED1YDR077W NGL2Q03264 515 aaKnown RBP8.34□□□□□ -1.07
SED1YDR077W MSL5Q12186 476 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SED1YDR077W ISA2Q12425 185 aa8.34□□□□□ -1.07
SED1YDR077W RPL3P14126 387 aaKnown RBP8.33□□□□□ -1.08
SED1YDR077W PCL1P24867 279 aa8.33□□□□□ -1.08
SED1YDR077W APL3P38065 1025 aa8.33□□□□□ -1.08
SED1YDR077W TCM62P38228 572 aaKnown RBP8.33□□□□□ -1.08
SED1YDR077W YIL060WP40519 144 aa8.33□□□□□ -1.08
SED1YDR077W PHB1P40961 287 aa8.33□□□□□ -1.08
SED1YDR077W CIN2P46670 268 aa8.33□□□□□ -1.08
SED1YDR077W LSM1P47017 172 aaKnown RBP8.33□□□□□ -1.08
SED1YDR077W NIT3P49954 291 aa8.33□□□□□ -1.08
SED1YDR077W RNH201P53942 307 aa8.33□□□□□ -1.08
SED1YDR077W ARG5,6Q01217 863 aa8.33□□□□□ -1.08
SED1YDR077W VBA1Q04301 562 aa8.33□□□□□ -1.08
SED1YDR077W TRM13Q12383 476 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms