RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
ACTB-204ENST00000425660 LRRN2O75325 713 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.222e-13■■□□□ 12.1
ACTB-204ENST00000425660 FLT3LGP49771 235 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ADAM17P78536 824 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ARID5AQ03989 594 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 AMHR2Q16671 573 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ZNF571Q7Z3V5 609 aaPredicted RBP16.45■□□□□ 0.22
ACTB-204ENST00000425660 KIAA1328Q86T90 577 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ZNF410Q86VK4 478 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 BRSK2Q8IWQ3 736 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 TRPV1Q8NER1 839 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 TAS1R2Q8TE23 839 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 MAP7D2Q96T17 732 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 AP5M1Q9H0R1 490 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 SETD4Q9NVD3 440 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 A0A087WZ62 844 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 PJA2O43164 708 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 EVI5O60447 810 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
ACTB-204ENST00000425660 VTNP04004 478 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.22
ACTB-204ENST00000425660 MFSD10Q14728 455 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 MFSD14CQ5VZR4 134 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ARHGEF19Q8IW93 802 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 FDXACB1Q9BRP7 624 aaPredicted RBP16.45■□□□□ 0.22
ACTB-204ENST00000425660 TCHPQ9BT92 498 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 PDE11AQ9HCR9 933 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 TRIM10Q9UDY6 481 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
ACTB-204ENST00000425660 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
ACTB-204ENST00000425660 HTTP42858 3142 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 A0A087X0T9 212 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 B4GALT5O43286 388 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 ZEB2O60315 1214 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 GFPT2O94808 682 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 FAM228BP0C875 321 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 HOXC8P31273 242 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 VEGFBP49765 207 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 NKX3-2P78367 333 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
ACTB-204ENST00000425660 CDC42EP1Q00587 391 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 PRKCZQ05513 592 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 KIF5AQ12840 1032 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
ACTB-204ENST00000425660 GPIHBP1Q8IV16 184 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 ZNF668Q96K58 619 aaPredicted RBP16.44■□□□□ 0.22
ACTB-204ENST00000425660 CGRRF1Q99675 332 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 SYT11Q9BT88 431 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 KATNAL1Q9BW62 490 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 UBE2TQ9NPD8 197 aaPredicted RBP16.44■□□□□ 0.22
ACTB-204ENST00000425660 NENFQ9UMX5 172 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
ACTB-204ENST00000425660 SMIM35A0A1B0GVV1 85 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 TNNI1P19237 187 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 CASQ1P31415 396 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 AP3M2P53677 418 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 C1QTNF8P60827 252 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 PURAQ00577 322 aaKnown RBP16.43■□□□□ 0.22
ACTB-204ENST00000425660 POU5F1Q01860 360 aaKnown RBP16.43■□□□□ 0.22
ACTB-204ENST00000425660 SP3Q02447 781 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 KIF22Q14807 665 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 OLIG1Q8TAK6 271 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 GUCA1BQ9UMX6 200 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 TFR2Q9UP52 801 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 EVPLQ92817 2033 aa16.43■□□□□ 0.22
ACTB-204ENST00000425660 FOXN3O00409 490 aaPredicted RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 TNFSF9P41273 254 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 MAGEA1P43355 309 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 PSEN2P49810 448 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 GJA9P57773 515 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 CAP1Q01518 475 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 GCNT1Q02742 428 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 BMS1Q14692 1282 aaKnown RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 ZNF568Q3ZCX4 644 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 C10orf76Q5T2E6 689 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 FAM81BQ96LP2 452 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 NT5C1BQ96P26 610 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 LUC7LQ9NQ29 371 aaKnown RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 SEPT4O43236 478 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 KPNA6O60684 536 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms