RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CR1LQ2VPA4 569 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SLC9C2Q5TAH2 1124 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ATL3Q6DD88 541 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ADALQ6DHV7 355 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CYP4F22Q6NT55 531 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SARM1Q6SZW1 724 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 LDHAL6AQ6ZMR3 332 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 MTERF4Q7Z6M4 381 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 TBC1D10CQ8IV04 446 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 LRRC8AQ8IWT6 810 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SCUBE1Q8IWY4 988 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TRIM48Q8IWZ4 208 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ZBTB38Q8NAP3 1195 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 LINC00301Q8NCQ3 95 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TTLL11Q8NHH1 800 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TEPSINQ96N21 525 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CDC6Q99741 560 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 SYT3Q9BQG1 590 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 CCDC94Q9BW85 323 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 CNNM1Q9NRU3 951 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 USP40Q9NVE5 1235 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 ANO10Q9NW15 660 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 TRMT1Q9NXH9 659 aaKnown RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 DTLQ9NZJ0 730 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 RIPOR2Q9Y4F9 1068 aa4.25□□□□□ -1.73
SMC6-202ENST00000381272 COL5A2P05997 1499 aaPredicted RBP4.25□□□□□ -1.73
SMC6-202ENST00000381272 DDX60Q8IY21 1712 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 DCCP43146 1447 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 RIC1Q4ADV7 1423 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 MAP3K15Q6ZN16 1313 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ZNF532Q9HCE3 1301 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ITGB4P16144 1822 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ECM29Q5VYK3 1845 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ANKRD18BA2A2Z9 1011 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 BLACEA4D250 179 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 CCDC69A6NI79 296 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 SMTNL1A8MU46 457 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 B4E1Z4 1266 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 B8ZZF3 427 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 UBE2Q2LH0YL09 131 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 SNAP23O00161 211 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 DHX16O60231 1041 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 ADCY3O60266 1144 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 FOXD2O60548 495 aaPredicted RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 WDHD1O75717 1129 aaPredicted RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 IDH1O75874 414 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 ZNF202O95125 648 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 CAVIN2O95810 425 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 SKILP12757 684 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 GRK2P25098 689 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 RPL13P26373 211 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 THBS2P35442 1172 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ADD2P35612 726 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 GRK3P35626 688 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PHKA1P46020 1223 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ITGA1P56199 1179 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 KIF23Q02241 960 aaPredicted RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 RBL2Q08999 1139 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 DPCR1Q3MIW9 517 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 NT5DC1Q5TFE4 455 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ANO1Q5XXA6 986 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 SYNE3Q6ZMZ3 975 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 TICAM2Q86XR7 235 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 CEP57L1Q8IYX8 460 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 FBXL16Q8N461 479 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PDCL2Q8N4E4 241 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 FBXO18Q8NFZ0 1043 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMC6-202ENST00000381272 PIP4K2CQ8TBX8 421 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PHKBQ93100 1093 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 MRFAP1L1Q96HT8 127 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 ALG1Q9BT22 464 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 MYL10Q9BUA6 226 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PLA2G12BQ9BX93 195 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PPARGC1AQ9UBK2 798 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 TRMT112Q9UI30 125 aaKnown RBP4.24□□□□□ -1.73
SMC6-202ENST00000381272 NUB1Q9Y5A7 615 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 MYH3P11055 1940 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 TNS2Q63HR2 1409 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 PLEKHG2Q9H7P9 1386 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 NUP98P52948 1817 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 MROH7-TTC4A0A0A0MT08 1334 aa4.24□□□□□ -1.73
SMC6-202ENST00000381272 SH2B2O14492 632 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 SMC2O95347 1197 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 YEATS4O95619 227 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 STARD3NLO95772 234 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 GNAT1P11488 350 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 PFKFB1P16118 471 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 U2AF2P26368 475 aaKnown RBP eCLIP4.23□□□□□ -1.732e-8■■■■■ 31.7
SMC6-202ENST00000381272 METAP2P50579 478 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMC6-202ENST00000381272 GJA9P57773 515 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CCZ1BP86790 482 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
SMC6-202ENST00000381272 SPIRE1Q08AE8 756 aa4.23□□□□□ -1.73
SMC6-202ENST00000381272 TRDNQ13061 729 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms