RNA–Protein interactions for RNA: YPR197C

YPR197C, Transcript of Dubious open reading frame, yeast

Gene YPR197C, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR197C	YPR197C	MDM34	P53083	459 aa		0.26	□□□□□ -2.37
YPR197C	YPR197C	YML018C	Q03730	393 aa		0.26	□□□□□ -2.37
YPR197C	YPR197C	YOR114W	Q12219	294 aa		0.26	□□□□□ -2.37
YPR197C	YPR197C	SMT3	Q12306	101 aa	Known RBP	0.26	□□□□□ -2.37
YPR197C	YPR197C	MHT1	Q12525	324 aa		0.26	□□□□□ -2.37
YPR197C	YPR197C	RPL31A	P0C2H8	113 aa	Known RBP	0.25	□□□□□ -2.37
YPR197C	YPR197C	FBA1	P14540	359 aa	Known RBP	0.25	□□□□□ -2.37
YPR197C	YPR197C	YBR219C	P38317	127 aa		0.25	□□□□□ -2.37
YPR197C	YPR197C	RPL37A	P49166	88 aa	Known RBP	0.25	□□□□□ -2.37
YPR197C	YPR197C	FMP41	P53889	259 aa	Known RBP	0.25	□□□□□ -2.37
YPR197C	YPR197C	SAS5	Q99314	248 aa		0.25	□□□□□ -2.37
YPR197C	YPR197C	CCA1	P21269	546 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	MDH2	P22133	377 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	HMT1	P38074	348 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	BMT5	P40493	336 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	DPP1	Q05521	289 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	CSI2	Q08054	341 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	YPR064W	Q12492	139 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	IZH4	Q99393	312 aa		0.24	□□□□□ -2.37
YPR197C	YPR197C	COS2	P0CX12	379 aa		0.23	□□□□□ -2.37
YPR197C	YPR197C	COS3	P0CX13	379 aa		0.23	□□□□□ -2.37
YPR197C	YPR197C	PRM15	Q03262	622 aa		0.23	□□□□□ -2.37
YPR197C	YPR197C	LOA1	Q06508	300 aa		0.23	□□□□□ -2.37
YPR197C	YPR197C	PBP4	Q07362	185 aa	Known RBP	0.23	□□□□□ -2.37
YPR197C	YPR197C	RRP42	Q12277	265 aa	Predicted RBP	0.23	□□□□□ -2.37
YPR197C	YPR197C	DSF1	P0CX08	502 aa		0.22	□□□□□ -2.37
YPR197C	YPR197C	YNR073C	P0CX09	502 aa		0.22	□□□□□ -2.37
YPR197C	YPR197C	VMA2	P16140	517 aa	Known RBP	0.22	□□□□□ -2.37
YPR197C	YPR197C	PEX4	P29340	183 aa		0.22	□□□□□ -2.37
YPR197C	YPR197C	MPP10	P47083	593 aa	Known RBP	0.22	□□□□□ -2.37
YPR197C	YPR197C	KEL2	P50090	882 aa		0.22	□□□□□ -2.37
YPR197C	YPR197C	RSM10	Q03201	203 aa		0.22	□□□□□ -2.37
YPR197C	YPR197C	DBP9	Q06218	594 aa	Known RBP	0.22	□□□□□ -2.37
YPR197C	YPR197C	RNP1	P32385	249 aa		0.21	□□□□□ -2.38
YPR197C	YPR197C	EOS1	P53938	366 aa		0.21	□□□□□ -2.38
YPR197C	YPR197C	SAM4	Q08985	325 aa	Known RBP	0.21	□□□□□ -2.38
YPR197C	YPR197C	FRE6	Q12473	712 aa		0.21	□□□□□ -2.38
YPR197C	YPR197C	RAD3	P06839	778 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	SUA5	P32579	426 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	RPS0A	P32905	252 aa	Known RBP	0.2	□□□□□ -2.38
YPR197C	YPR197C	DOG1	P38774	246 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	TEM1	P38987	245 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	YJL028W	P47062	111 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	NIF3	P53081	288 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	CYT2	Q00873	224 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	MRPS8	Q03799	155 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	APC9	Q12107	265 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	YPR1	Q12458	312 aa		0.2	□□□□□ -2.38
YPR197C	YPR197C	PET494	P07390	489 aa	Predicted RBP	0.19	□□□□□ -2.38
YPR197C	YPR197C	TAL1	P15019	335 aa	Known RBP	0.19	□□□□□ -2.38
YPR197C	YPR197C	KDX1	P36005	433 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	LIN1	P38852	340 aa	Predicted RBP	0.19	□□□□□ -2.38
YPR197C	YPR197C	SHC1	P39000	512 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	VTC1	P40046	129 aa	RIP-Chip data	0.19	□□□□□ -2.38	not detected
YPR197C	YPR197C	PRM10	P42946	383 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	AGX1	P43567	385 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	RPL37B	P51402	88 aa	Known RBP	0.19	□□□□□ -2.38
YPR197C	YPR197C	CUE3	P53137	624 aa	Known RBP	0.19	□□□□□ -2.38
YPR197C	YPR197C	SDC1	Q03323	175 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	YLR162W	Q06235	118 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	CTR3	Q06686	241 aa		0.19	□□□□□ -2.38
YPR197C	YPR197C	RPS3	P05750	240 aa	Known RBP	0.18	□□□□□ -2.38
YPR197C	YPR197C	RNR2	P09938	399 aa	Known RBP	0.18	□□□□□ -2.38
YPR197C	YPR197C	SPT4	P32914	102 aa	Predicted RBP	0.18	□□□□□ -2.38
YPR197C	YPR197C	UPS2	P35200	230 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	RXT2	P38255	430 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	AVT2	P39981	480 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	SMD3	P43321	101 aa	Known RBP	0.18	□□□□□ -2.38
YPR197C	YPR197C	VPS60	Q03390	229 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	YMR209C	Q03648	457 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	PEX10	Q05568	337 aa		0.18	□□□□□ -2.38
YPR197C	YPR197C	YMR316C-A	I2HB70	103 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	VAR1	P02381	398 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	DDI2	P0CH63	225 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	DDI3	P0CH64	225 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	MAL32	P38158	584 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	SIF2	P38262	535 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	YHR022C	P38763	256 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	HUA1	P40325	198 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	JEM1	P40358	645 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	MAL12	P53341	584 aa		0.17	□□□□□ -2.38
YPR197C	YPR197C	GAL3	P13045	520 aa		0.16	□□□□□ -2.38
YPR197C	YPR197C	TCD1	P38756	429 aa		0.16	□□□□□ -2.38
YPR197C	YPR197C	RPL13B	P40212	199 aa	Known RBP	0.16	□□□□□ -2.38
YPR197C	YPR197C	TAF9	Q05027	157 aa		0.16	□□□□□ -2.38
YPR197C	YPR197C	BOP2	Q06150	570 aa		0.16	□□□□□ -2.38
YPR197C	YPR197C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
YPR197C	YPR197C	RIO1	Q12196	484 aa	Known RBP	0.16	□□□□□ -2.38
YPR197C	YPR197C	RPL13A	Q12690	199 aa	Predicted RBP	0.16	□□□□□ -2.38
YPR197C	YPR197C	RPC37	P36121	282 aa		0.15	□□□□□ -2.39
YPR197C	YPR197C	PHO88	P38264	188 aa	Predicted RBP	0.15	□□□□□ -2.39
YPR197C	YPR197C	FET3	P38993	636 aa		0.15	□□□□□ -2.39
YPR197C	YPR197C	OST2	P46964	130 aa		0.15	□□□□□ -2.39
YPR197C	YPR197C	ERG25	P53045	309 aa		0.15	□□□□□ -2.39
YPR197C	YPR197C	PST1	Q12355	444 aa		0.15	□□□□□ -2.39
YPR197C	YPR197C	CPA1	P07258	411 aa	Known RBP	0.14	□□□□□ -2.39
YPR197C	YPR197C	CAM1	P29547	415 aa	Known RBP	0.14	□□□□□ -2.39
YPR197C	YPR197C	YKL063C	P35725	167 aa		0.14	□□□□□ -2.39
YPR197C	YPR197C	ECM13	P38195	257 aa		0.14	□□□□□ -2.39
YPR197C	YPR197C	NPT1	P39683	429 aa	Known RBP	0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms