RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W FRT1Q99332 602 aa3.38□□□□□ -1.87
SWI1YPL016W GUK1P15454 187 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W ATP10P18496 279 aa3.37□□□□□ -1.87
SWI1YPL016W YCR087C-AP37263 153 aa3.37□□□□□ -1.87
SWI1YPL016W THI2P38141 450 aa3.37□□□□□ -1.87
SWI1YPL016W SYS1P41544 203 aa3.37□□□□□ -1.87
SWI1YPL016W SAM37P50110 327 aa3.37□□□□□ -1.87
SWI1YPL016W LYS5P50113 272 aa3.37□□□□□ -1.87
SWI1YPL016W RRP45Q05636 305 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W VPS74Q06385 345 aa3.37□□□□□ -1.87
SWI1YPL016W UBX3Q12229 455 aa3.37□□□□□ -1.87
SWI1YPL016W TPO4Q12256 659 aa3.37□□□□□ -1.87
SWI1YPL016W HTA2P04912 132 aa3.37□□□□□ -1.87
SWI1YPL016W MAK32P23060 363 aa3.37□□□□□ -1.87
SWI1YPL016W MTC7P32633 139 aa3.37□□□□□ -1.87
SWI1YPL016W COA1P40452 197 aa3.37□□□□□ -1.87
SWI1YPL016W FLX1P40464 311 aa3.37□□□□□ -1.87
SWI1YPL016W CDC40P40968 455 aaPredicted RBP3.37□□□□□ -1.87
SWI1YPL016W COG7P53195 279 aa3.37□□□□□ -1.87
SWI1YPL016W CWC27Q02770 301 aa3.37□□□□□ -1.87
SWI1YPL016W YPR127WQ06494 345 aa3.37□□□□□ -1.87
SWI1YPL016W SRL2Q12020 392 aa3.37□□□□□ -1.87
SWI1YPL016W WIP1Q2V2P8 89 aa3.37□□□□□ -1.87
SWI1YPL016W NBL1Q3E7Y6 73 aa3.37□□□□□ -1.87
SWI1YPL016W ISD11Q6Q560 94 aa3.37□□□□□ -1.87
SWI1YPL016W SUS1Q6WNK7 96 aa3.37□□□□□ -1.87
SWI1YPL016W YPR096CO13587 100 aa3.37□□□□□ -1.87
SWI1YPL016W HAP2P06774 265 aa3.37□□□□□ -1.87
SWI1YPL016W CPA1P07258 411 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W RPL31AP0C2H8 113 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W RPL31BP0C2H9 113 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W PRE9P23638 258 aaKnown RBP3.37□□□□□ -1.87
SWI1YPL016W YCL068CP25593 260 aa3.37□□□□□ -1.87
SWI1YPL016W PGD1P40356 397 aa3.37□□□□□ -1.87
SWI1YPL016W AZR1P50080 613 aa3.37□□□□□ -1.87
SWI1YPL016W RPN14P53196 417 aa3.37□□□□□ -1.87
SWI1YPL016W SPC19Q03954 165 aa3.37□□□□□ -1.87
SWI1YPL016W CSM3Q04659 317 aa3.37□□□□□ -1.87
SWI1YPL016W CTR3Q06686 241 aa3.37□□□□□ -1.87
SWI1YPL016W TFC7Q12415 435 aa3.37□□□□□ -1.87
SWI1YPL016W YPR015CQ12531 247 aa3.37□□□□□ -1.87
SWI1YPL016W MHF1Q3E835 90 aa3.37□□□□□ -1.87
SWI1YPL016W PET20Q99373 253 aa3.37□□□□□ -1.87
SWI1YPL016W RPS9AO13516 197 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W INH1P01097 85 aa3.36□□□□□ -1.87
SWI1YPL016W RPS9BP05755 195 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W HTS1P07263 546 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W RPL35AP0CX84 120 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W RPL35BP0CX85 120 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W ESS1P22696 170 aa3.36□□□□□ -1.87
SWI1YPL016W STE50P25344 346 aa3.36□□□□□ -1.87
SWI1YPL016W TOA2P32774 122 aa3.36□□□□□ -1.87
SWI1YPL016W YBR284WP38150 797 aa3.36□□□□□ -1.87
SWI1YPL016W CRP1P38845 465 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W PRP39P39682 629 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W ISC1P40015 477 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W MBF1O14467 151 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W SRD1P09007 221 aa3.36□□□□□ -1.87
SWI1YPL016W BGL2P15703 313 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W BUB2P26448 306 aaPredicted RBP3.36□□□□□ -1.87
SWI1YPL016W HMX1P32339 317 aa3.36□□□□□ -1.87
SWI1YPL016W CHS7P38843 316 aa3.36□□□□□ -1.87
SWI1YPL016W CHL4P38907 458 aa3.36□□□□□ -1.87
SWI1YPL016W YAR028WP39548 234 aa3.36□□□□□ -1.87
SWI1YPL016W LTP1P40347 161 aa3.36□□□□□ -1.87
SWI1YPL016W CAT5P41735 233 aa3.36□□□□□ -1.87
SWI1YPL016W STR3P53101 465 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W VBA4Q04602 768 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W ROY1Q04847 553 aa3.36□□□□□ -1.87
SWI1YPL016W MTR10Q99189 972 aa3.36□□□□□ -1.87
SWI1YPL016W CDC9P04819 755 aa3.36□□□□□ -1.87
SWI1YPL016W MSF1P08425 469 aa3.36□□□□□ -1.87
SWI1YPL016W MSN1P22148 382 aa3.36□□□□□ -1.87
SWI1YPL016W DCC1P25559 380 aa3.36□□□□□ -1.87
SWI1YPL016W YMC1P32331 307 aa3.36□□□□□ -1.87
SWI1YPL016W AIM29P36154 155 aa3.36□□□□□ -1.87
SWI1YPL016W TSL1P38427 1098 aaKnown RBP3.36□□□□□ -1.87
SWI1YPL016W YNL198CP40166 100 aa3.36□□□□□ -1.87
SWI1YPL016W CIN5P40917 295 aa3.36□□□□□ -1.87
SWI1YPL016W SKP1P52286 194 aa3.36□□□□□ -1.87
SWI1YPL016W MSC1Q03104 513 aa3.36□□□□□ -1.87
SWI1YPL016W YMR321CQ04898 105 aa3.36□□□□□ -1.87
SWI1YPL016W GPM2Q12008 311 aa3.36□□□□□ -1.87
SWI1YPL016W FRE6Q12473 712 aa3.36□□□□□ -1.87
SWI1YPL016W SYN8P31377 255 aa3.35□□□□□ -1.87
SWI1YPL016W SHO1P40073 367 aa3.35□□□□□ -1.87
SWI1YPL016W ATG18P43601 500 aa3.35□□□□□ -1.87
SWI1YPL016W YJL028WP47062 111 aa3.35□□□□□ -1.87
SWI1YPL016W ALG11P53954 548 aaKnown RBP3.35□□□□□ -1.87
SWI1YPL016W ATC1Q04005 294 aa3.35□□□□□ -1.87
SWI1YPL016W LRS4Q04087 347 aaKnown RBP3.35□□□□□ -1.87
SWI1YPL016W YLR225CQ05948 407 aaKnown RBP3.35□□□□□ -1.87
SWI1YPL016W YLR030WQ07967 263 aa3.35□□□□□ -1.87
SWI1YPL016W UTP23Q12339 254 aaKnown RBP3.35□□□□□ -1.87
SWI1YPL016W SNF5P18480 905 aa3.35□□□□□ -1.87
SWI1YPL016W RER1P25560 188 aa3.35□□□□□ -1.87
SWI1YPL016W EHD3P28817 500 aa3.35□□□□□ -1.87
SWI1YPL016W AFG1P32317 509 aa3.35□□□□□ -1.87
SWI1YPL016W YUH1P35127 236 aa3.35□□□□□ -1.87
SWI1YPL016W CTF13P35203 478 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms