RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C DBF2P22204 572 aa5.12□□□□□ -1.59
UBC11YOR339C MAK32P23060 363 aa5.12□□□□□ -1.59
UBC11YOR339C ITR1P30605 584 aa5.12□□□□□ -1.59
UBC11YOR339C DOA4P32571 926 aa5.12□□□□□ -1.59
UBC11YOR339C MTH1P35198 433 aa5.12□□□□□ -1.59
UBC11YOR339C SPT10P35208 640 aa5.12□□□□□ -1.59
UBC11YOR339C SLZ1P40167 298 aa5.12□□□□□ -1.59
UBC11YOR339C TIR3P40552 269 aa5.12□□□□□ -1.59
UBC11YOR339C YJR120WP47157 116 aa5.12□□□□□ -1.59
UBC11YOR339C CCC1P47818 322 aa5.12□□□□□ -1.59
UBC11YOR339C CPR8P53728 308 aa5.12□□□□□ -1.59
UBC11YOR339C SSY1Q03770 852 aa5.12□□□□□ -1.59
UBC11YOR339C TSR2Q06672 205 aaKnown RBP5.12□□□□□ -1.59
UBC11YOR339C RAF1Q06891 181 aa5.12□□□□□ -1.59
UBC11YOR339C SSK1Q07084 712 aa5.12□□□□□ -1.59
UBC11YOR339C COX17Q12287 69 aa5.12□□□□□ -1.59
UBC11YOR339C RTN2Q12443 393 aa5.12□□□□□ -1.59
UBC11YOR339C DCP1Q12517 231 aaPredicted RBP5.12□□□□□ -1.59
UBC11YOR339C SOD2P00447 233 aa5.11□□□□□ -1.59
UBC11YOR339C SCEIP03882 235 aa5.11□□□□□ -1.59
UBC11YOR339C CDC31P06704 161 aaKnown RBP5.11□□□□□ -1.59
UBC11YOR339C COX9P07255 59 aa5.11□□□□□ -1.59
UBC11YOR339C CLB2P24869 491 aa5.11□□□□□ -1.59
UBC11YOR339C ATG15P25641 520 aa5.11□□□□□ -1.59
UBC11YOR339C PAU2P32612 120 aa5.11□□□□□ -1.59
UBC11YOR339C PPG1P32838 368 aa5.11□□□□□ -1.59
UBC11YOR339C GPP1P41277 250 aaKnown RBP5.11□□□□□ -1.59
UBC11YOR339C IDP2P41939 412 aa5.11□□□□□ -1.59
UBC11YOR339C SLS1P42900 643 aa5.11□□□□□ -1.59
UBC11YOR339C LYS20P48570 428 aaKnown RBP5.11□□□□□ -1.59
UBC11YOR339C NIT3P49954 291 aa5.11□□□□□ -1.59
UBC11YOR339C PMT5P52867 743 aa5.11□□□□□ -1.59
UBC11YOR339C YGR054WP53235 642 aaKnown RBP5.11□□□□□ -1.59
UBC11YOR339C ALG12P53730 551 aa5.11□□□□□ -1.59
UBC11YOR339C YNL165WP53891 406 aa5.11□□□□□ -1.59
UBC11YOR339C RCF1Q03713 159 aa5.11□□□□□ -1.59
UBC11YOR339C CRR1Q05790 422 aa5.11□□□□□ -1.59
UBC11YOR339C GPN3Q06543 272 aa5.11□□□□□ -1.59
UBC11YOR339C ASR1Q06834 288 aa5.11□□□□□ -1.59
UBC11YOR339C MET32Q12041 191 aa5.11□□□□□ -1.59
UBC11YOR339C LYS21Q12122 440 aaKnown RBP5.11□□□□□ -1.59
UBC11YOR339C TIR4Q12218 487 aaPredicted RBP5.11□□□□□ -1.59
UBC11YOR339C MCT1Q12283 360 aa5.11□□□□□ -1.59
UBC11YOR339C RPN13O13563 156 aa5.1□□□□□ -1.59
UBC11YOR339C COX5BP00425 151 aa5.1□□□□□ -1.59
UBC11YOR339C ADK1P07170 222 aaKnown RBP5.1□□□□□ -1.59
UBC11YOR339C MRPS5P33759 307 aa5.1□□□□□ -1.59
UBC11YOR339C YBR137WP38276 179 aa5.1□□□□□ -1.59
UBC11YOR339C SDS24P38314 527 aa5.1□□□□□ -1.59
UBC11YOR339C AAD14P42884 376 aa5.1□□□□□ -1.59
UBC11YOR339C LOH1P47055 219 aa5.1□□□□□ -1.59
UBC11YOR339C ACS2P52910 683 aaKnown RBP5.1□□□□□ -1.59
UBC11YOR339C DOC1P53068 250 aa5.1□□□□□ -1.59
UBC11YOR339C YGL204CP53089 101 aa5.1□□□□□ -1.59
UBC11YOR339C TNA1P53322 534 aa5.1□□□□□ -1.59
UBC11YOR339C SAM50P53969 484 aa5.1□□□□□ -1.59
UBC11YOR339C RCE1Q03530 315 aa5.1□□□□□ -1.59
UBC11YOR339C MSS11Q03825 758 aa5.1□□□□□ -1.59
UBC11YOR339C YDR387CQ04162 555 aa5.1□□□□□ -1.59
UBC11YOR339C LUC7Q07508 261 aaPredicted RBP5.1□□□□□ -1.59
UBC11YOR339C NGL1Q08213 363 aaKnown RBP5.1□□□□□ -1.59
UBC11YOR339C PEX27Q08580 376 aa5.1□□□□□ -1.59
UBC11YOR339C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
UBC11YOR339C RRI1Q12468 440 aa5.1□□□□□ -1.59
UBC11YOR339C GCN4P03069 281 aa5.09□□□□□ -1.59
UBC11YOR339C HIS3P06633 220 aa5.09□□□□□ -1.59
UBC11YOR339C RPS18AP0CX55 146 aaKnown RBP5.09□□□□□ -1.59
UBC11YOR339C RPS18BP0CX56 146 aaPredicted RBP5.09□□□□□ -1.59
UBC11YOR339C MCM1P11746 286 aa5.09□□□□□ -1.59
UBC11YOR339C ERG24P32462 438 aaKnown RBP5.09□□□□□ -1.59
UBC11YOR339C KRE6P32486 720 aa5.09□□□□□ -1.59
UBC11YOR339C ZRT3P34240 503 aa5.09□□□□□ -1.59
UBC11YOR339C SHE2P36068 246 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
UBC11YOR339C FRM2P37261 193 aa5.09□□□□□ -1.59
UBC11YOR339C CCZ1P38273 704 aa5.09□□□□□ -1.59
UBC11YOR339C YHK8P38776 514 aa5.09□□□□□ -1.59
UBC11YOR339C SEN34P39707 275 aa5.09□□□□□ -1.59
UBC11YOR339C PUG1P40100 303 aa5.09□□□□□ -1.59
UBC11YOR339C MOB2P43563 287 aa5.09□□□□□ -1.59
UBC11YOR339C CWC23P52868 283 aaPredicted RBP5.09□□□□□ -1.59
UBC11YOR339C RAI1P53063 387 aaKnown RBP5.09□□□□□ -1.59
UBC11YOR339C YIP4P53093 235 aa5.09□□□□□ -1.59
UBC11YOR339C PXR1P53335 271 aaPredicted RBP5.09□□□□□ -1.59
UBC11YOR339C YLR152CP54072 576 aa5.09□□□□□ -1.59
UBC11YOR339C GPI17Q04080 534 aa5.09□□□□□ -1.59
UBC11YOR339C THI72Q08579 599 aa5.09□□□□□ -1.59
UBC11YOR339C SOG2Q08817 791 aa5.09□□□□□ -1.59
UBC11YOR339C MSH5Q12175 901 aa5.09□□□□□ -1.59
UBC11YOR339C IZH2Q12442 317 aa5.09□□□□□ -1.59
UBC11YOR339C CDC39P25655 2108 aaKnown RBP5.09□□□□□ -1.59
UBC11YOR339C QCR7P00128 127 aa5.08□□□□□ -1.6
UBC11YOR339C MES1P00958 751 aaKnown RBP5.08□□□□□ -1.6
UBC11YOR339C CDC36P06100 191 aaPredicted RBP5.08□□□□□ -1.6
UBC11YOR339C PHO4P07270 312 aaKnown RBP5.08□□□□□ -1.6
UBC11YOR339C TMA19P35691 167 aaKnown RBP5.08□□□□□ -1.6
UBC11YOR339C SFK1P35735 353 aa5.08□□□□□ -1.6
UBC11YOR339C TAT1P38085 619 aa5.08□□□□□ -1.6
UBC11YOR339C YER084WP40057 128 aa5.08□□□□□ -1.6
UBC11YOR339C TOK1P40310 691 aa5.08□□□□□ -1.6
UBC11YOR339C DLS1P40366 167 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms