RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeast

Gene GFD1, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GFD1	YMR255W	MLH1	P38920	769 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	YAL037W	P39728	267 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	RPL10	P41805	221 aa	Known RBP	5.22	□□□□□ -1.57
GFD1	YMR255W	MNN5	P46982	586 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	RPS12	P48589	143 aa	Known RBP	5.22	□□□□□ -1.57
GFD1	YMR255W	YGL101W	P53144	215 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	LCL3	P53153	274 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	SCW4	P53334	386 aa	Known RBP	5.22	□□□□□ -1.57
GFD1	YMR255W	PGA1	P53896	198 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	LSM7	P53905	115 aa	Known RBP	5.22	□□□□□ -1.57
GFD1	YMR255W	MRPS16	Q02608	121 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	NUP116	Q02630	1113 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	IPK1	Q06667	281 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	BBP1	Q12365	385 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	YBR126W-A	Q8TGU7	68 aa		5.22	□□□□□ -1.57
GFD1	YMR255W	MCK1	P21965	375 aa	Known RBP	5.21	□□□□□ -1.58
GFD1	YMR255W	YCP4	P25349	247 aa	Known RBP	5.21	□□□□□ -1.58
GFD1	YMR255W	HYM1	P32464	399 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	TMA19	P35691	167 aa	Known RBP	5.21	□□□□□ -1.58
GFD1	YMR255W	ECM34	P38728	170 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	LYS1	P38998	373 aa	RIP-Chip data	5.21	□□□□□ -1.58	not detected
GFD1	YMR255W	HPA3	P39979	161 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	PAM16	P42949	149 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	MRPL50	P53724	139 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	IZH1	Q03419	316 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	SEC13	Q04491	297 aa	Known RBP	5.21	□□□□□ -1.58
GFD1	YMR255W	POS5	Q06892	414 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	YOR283W	Q12040	230 aa	Known RBP	5.21	□□□□□ -1.58
GFD1	YMR255W	APC2	Q12440	853 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	LAG2	Q92325	660 aa		5.21	□□□□□ -1.58
GFD1	YMR255W	QCR7	P00128	127 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	YPT1	P01123	206 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	RED1	P14291	827 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	EXG1	P23776	448 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	YCR102C	P25608	368 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	ERG9	P29704	444 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	SNC1	P31109	117 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	FUN26	P31381	517 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	RNP1	P32385	249 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	ECT1	P33412	323 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	YOR062C	P36025	268 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	ANR2	P36090	516 aa	Predicted RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	AUR1	P36107	401 aa	Predicted RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	THI2	P38141	450 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	ANS1	P38832	159 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	MNL1	P38888	796 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	NOP16	P40007	231 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	POP1	P41812	875 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	YGL235W	P53071	178 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	PAU12	P53343	120 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	AIM36	Q03798	255 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	CAC2	Q04199	468 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	MRPL1	Q04599	285 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	YMR315W	Q04869	349 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	ARV1	Q06541	321 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	ATG41	Q12048	136 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	LEU9	Q12166	604 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	YLR099W-A	Q3E798	87 aa		5.2	□□□□□ -1.58
GFD1	YMR255W	DET1	Q99288	334 aa	Known RBP	5.2	□□□□□ -1.58
GFD1	YMR255W	BEM2	P39960	2167 aa	Known RBP	5.19	□□□□□ -1.58
GFD1	YMR255W	HIS3	P06633	220 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	SPS2	P08459	502 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	YGL041W-A	P0C5N3	154 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	PRP2	P20095	876 aa	Predicted RBP	5.19	□□□□□ -1.58
GFD1	YMR255W	VMA16	P23968	213 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	YEF1	P32622	495 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	CDC13	P32797	924 aa	Known RBP	5.19	□□□□□ -1.58
GFD1	YMR255W	PTR2	P32901	601 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	SKN1	P33336	771 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	JEN1	P36035	616 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
GFD1	YMR255W	DTR1	P38125	572 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	PAU24	P38155	120 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	PFS1	P38872	237 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	PTH1	P38876	190 aa	Known RBP	5.19	□□□□□ -1.58
GFD1	YMR255W	RTT105	P40063	208 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	ICE2	P40499	491 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	HXT9	P40885	567 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	YGR210C	P42942	411 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	RPE1	P46969	238 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	PMT5	P52867	743 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	SPC19	Q03954	165 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	ASR1	Q06834	288 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	MDM32	Q12171	622 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	TIR4	Q12218	487 aa	Predicted RBP	5.19	□□□□□ -1.58
GFD1	YMR255W	YOR214C	Q12282	236 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	FRE6	Q12473	712 aa		5.19	□□□□□ -1.58
GFD1	YMR255W	RPS18A	P0CX55	146 aa	Known RBP	5.18	□□□□□ -1.58
GFD1	YMR255W	RPS18B	P0CX56	146 aa	Predicted RBP	5.18	□□□□□ -1.58
GFD1	YMR255W	DOA4	P32571	926 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
GFD1	YMR255W	WSC4	P38739	605 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	TRR2	P38816	342 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	BAT1	P38891	393 aa	Known RBP	5.18	□□□□□ -1.58
GFD1	YMR255W	UIP3	P39547	235 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	TIF34	P40217	347 aa	Known RBP	5.18	□□□□□ -1.58
GFD1	YMR255W	YIL060W	P40519	144 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	MDE1	P47095	244 aa		5.18	□□□□□ -1.58
GFD1	YMR255W	LYS20	P48570	428 aa	Known RBP	5.18	□□□□□ -1.58
GFD1	YMR255W	YGR067C	P53243	804 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms