RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C LOA1Q06508 300 aa3.44□□□□□ -1.86
CUS1YMR240C CPT1P17898 393 aa3.44□□□□□ -1.86
CUS1YMR240C PHO80P20052 293 aa3.44□□□□□ -1.86
CUS1YMR240C OSM1P21375 501 aaKnown RBP3.44□□□□□ -1.86
CUS1YMR240C CWP1P28319 239 aa3.44□□□□□ -1.86
CUS1YMR240C TPS2P31688 896 aaKnown RBP3.44□□□□□ -1.86
CUS1YMR240C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
CUS1YMR240C YHL044WP38727 235 aa3.44□□□□□ -1.86
CUS1YMR240C AVT6P40074 448 aa3.44□□□□□ -1.86
CUS1YMR240C UFD1P53044 361 aa3.44□□□□□ -1.86
CUS1YMR240C TIM21P53220 239 aa3.44□□□□□ -1.86
CUS1YMR240C YNL134CP53912 376 aaKnown RBP3.44□□□□□ -1.86
CUS1YMR240C MRS2Q01926 470 aa3.44□□□□□ -1.86
CUS1YMR240C SDO1Q07953 250 aaKnown RBP3.44□□□□□ -1.86
CUS1YMR240C CCH1P50077 2039 aa3.43□□□□□ -1.86
CUS1YMR240C CHD1P32657 1468 aa3.43□□□□□ -1.86
CUS1YMR240C YMR316C-AI2HB70 103 aa3.43□□□□□ -1.86
CUS1YMR240C RAD3P06839 778 aa3.43□□□□□ -1.86
CUS1YMR240C KRE6P32486 720 aa3.43□□□□□ -1.86
CUS1YMR240C PRS4P38063 326 aaPredicted RBP3.43□□□□□ -1.86
CUS1YMR240C PRS2P38620 318 aaKnown RBP3.43□□□□□ -1.86
CUS1YMR240C BIG1P38813 335 aa3.43□□□□□ -1.86
CUS1YMR240C SER33P40510 469 aa3.43□□□□□ -1.86
CUS1YMR240C NBP35P52920 328 aa3.43□□□□□ -1.86
CUS1YMR240C SWS2P53937 143 aa3.43□□□□□ -1.86
CUS1YMR240C SRL4Q03085 281 aa3.43□□□□□ -1.86
CUS1YMR240C SDC1Q03323 175 aa3.43□□□□□ -1.86
CUS1YMR240C ATG38Q05789 226 aaKnown RBP3.43□□□□□ -1.86
CUS1YMR240C MER1P16523 270 aa3.42□□□□□ -1.86
CUS1YMR240C RAD51P25454 400 aa3.42□□□□□ -1.86
CUS1YMR240C CAM1P29547 415 aaKnown RBP3.42□□□□□ -1.86
CUS1YMR240C CAT2P32796 670 aaKnown RBP3.42□□□□□ -1.86
CUS1YMR240C DED81P38707 554 aaKnown RBP3.42□□□□□ -1.86
CUS1YMR240C SYS1P41544 203 aa3.42□□□□□ -1.86
CUS1YMR240C RPL10P41805 221 aaKnown RBP3.42□□□□□ -1.86
CUS1YMR240C BNA6P43619 295 aa3.42□□□□□ -1.86
CUS1YMR240C YPL264CQ08980 353 aa3.42□□□□□ -1.86
CUS1YMR240C YDL012CQ12489 107 aa3.42□□□□□ -1.86
CUS1YMR240C VPS3P23643 1011 aa3.41□□□□□ -1.86
CUS1YMR240C YKT6P36015 200 aaKnown RBP3.41□□□□□ -1.86
CUS1YMR240C POP8P38208 133 aa3.41□□□□□ -1.86
CUS1YMR240C TCD1P38756 429 aa3.41□□□□□ -1.86
CUS1YMR240C YHR045WP38775 560 aa3.41□□□□□ -1.86
CUS1YMR240C DSN1P40568 576 aa3.41□□□□□ -1.86
CUS1YMR240C GCN20P43535 752 aaKnown RBP3.41□□□□□ -1.86
CUS1YMR240C YJR012CP47087 207 aa3.41□□□□□ -1.86
CUS1YMR240C CGR1P53188 120 aa3.41□□□□□ -1.86
CUS1YMR240C MAL13P53338 473 aa3.41□□□□□ -1.86
CUS1YMR240C ZRG17P53735 605 aa3.41□□□□□ -1.86
CUS1YMR240C NNT1Q05874 261 aa3.41□□□□□ -1.86
CUS1YMR240C IES4Q08561 116 aa3.41□□□□□ -1.86
CUS1YMR240C AI5_BETAQ9ZZX0 354 aa3.41□□□□□ -1.86
CUS1YMR240C STH1P32597 1359 aa3.4□□□□□ -1.87
CUS1YMR240C RPL4AP10664 362 aaKnown RBP3.4□□□□□ -1.87
CUS1YMR240C RPB4P20433 221 aaPredicted RBP3.4□□□□□ -1.87
CUS1YMR240C ARO4P32449 370 aaKnown RBP3.4□□□□□ -1.87
CUS1YMR240C MRX3P38172 270 aa3.4□□□□□ -1.87
CUS1YMR240C SLX1P38324 304 aa3.4□□□□□ -1.87
CUS1YMR240C YHI9P38765 294 aa3.4□□□□□ -1.87
CUS1YMR240C FMC1P40491 155 aa3.4□□□□□ -1.87
CUS1YMR240C RPL4BP49626 362 aaKnown RBP3.4□□□□□ -1.87
CUS1YMR240C GIM3P53900 129 aa3.4□□□□□ -1.87
CUS1YMR240C BOP2Q06150 570 aa3.4□□□□□ -1.87
CUS1YMR240C PRE7P23724 241 aaKnown RBP3.39□□□□□ -1.87
CUS1YMR240C PHO89P38361 574 aa3.39□□□□□ -1.87
CUS1YMR240C YIR035CP40579 254 aa3.39□□□□□ -1.87
CUS1YMR240C FMP41P53889 259 aaKnown RBP3.39□□□□□ -1.87
CUS1YMR240C TY3A-GQ12173 290 aa3.39□□□□□ -1.87
CUS1YMR240C YOR029WQ12243 111 aa3.39□□□□□ -1.87
CUS1YMR240C ATG31Q12421 196 aa3.39□□□□□ -1.87
CUS1YMR240C TY3A-IQ99219 290 aa3.39□□□□□ -1.87
CUS1YMR240C NOP1P15646 327 aaKnown RBP3.38□□□□□ -1.87
CUS1YMR240C CDC42P19073 191 aa3.38□□□□□ -1.87
CUS1YMR240C MRPL25P23369 157 aa3.38□□□□□ -1.87
CUS1YMR240C ERG2P32352 222 aa3.38□□□□□ -1.87
CUS1YMR240C DOA4P32571 926 aa3.38□□□□□ -1.87
CUS1YMR240C MED8P38304 223 aa3.38□□□□□ -1.87
CUS1YMR240C NBP1P52919 319 aaPredicted RBP3.38□□□□□ -1.87
CUS1YMR240C SWT21P53873 357 aaPredicted RBP3.38□□□□□ -1.87
CUS1YMR240C YNL095CP53932 642 aa3.38□□□□□ -1.87
CUS1YMR240C OSH6Q02201 448 aa3.38□□□□□ -1.87
CUS1YMR240C MSH5Q12175 901 aa3.38□□□□□ -1.87
CUS1YMR240C QRI5P32344 111 aa3.37□□□□□ -1.87
CUS1YMR240C COS4P43542 379 aa3.37□□□□□ -1.87
CUS1YMR240C YFR045WP43617 309 aa3.37□□□□□ -1.87
CUS1YMR240C PET117Q02771 107 aa3.37□□□□□ -1.87
CUS1YMR240C EBS1Q03466 884 aaKnown RBP3.37□□□□□ -1.87
CUS1YMR240C TVP15Q03860 143 aa3.37□□□□□ -1.87
CUS1YMR240C PAM18Q07914 168 aa3.37□□□□□ -1.87
CUS1YMR240C CLP1Q08685 445 aaPredicted RBP3.37□□□□□ -1.87
CUS1YMR240C CSM4Q08955 156 aa3.37□□□□□ -1.87
CUS1YMR240C IES3Q12345 250 aa3.37□□□□□ -1.87
CUS1YMR240C ATG5Q12380 294 aa3.37□□□□□ -1.87
CUS1YMR240C SNF8Q12483 233 aa3.37□□□□□ -1.87
CUS1YMR240C ADF1Q2V2Q1 113 aa3.37□□□□□ -1.87
CUS1YMR240C YAK1P14680 807 aa3.36□□□□□ -1.87
CUS1YMR240C RNA15P25299 296 aaPredicted RBP3.36□□□□□ -1.87
CUS1YMR240C HMT1P38074 348 aa3.36□□□□□ -1.87
CUS1YMR240C RPE1P46969 238 aa3.36□□□□□ -1.87
CUS1YMR240C MRPL50P53724 139 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms