RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C IBA57P47158 497 aa2.19□□□□□ -2.06
SMD3YLR147C SDC1Q03323 175 aa2.19□□□□□ -2.06
SMD3YLR147C CGI121Q03705 181 aaKnown RBP2.19□□□□□ -2.06
SMD3YLR147C BER1Q06688 274 aaKnown RBP2.19□□□□□ -2.06
SMD3YLR147C YOR268CQ08734 132 aa2.19□□□□□ -2.06
SMD3YLR147C NOT5Q12514 560 aaPredicted RBP2.19□□□□□ -2.06
SMD3YLR147C ISD11Q6Q560 94 aa2.19□□□□□ -2.06
SMD3YLR147C STF1P01098 86 aa2.18□□□□□ -2.06
SMD3YLR147C DSK2P48510 373 aa2.18□□□□□ -2.06
SMD3YLR147C KEL2P50090 882 aa2.18□□□□□ -2.06
SMD3YLR147C SPO19Q03029 223 aa2.18□□□□□ -2.06
SMD3YLR147C GRH1Q04410 372 aaKnown RBP2.18□□□□□ -2.06
SMD3YLR147C BCP1Q06338 283 aa2.18□□□□□ -2.06
SMD3YLR147C NUP157P40064 1391 aaKnown RBP2.18□□□□□ -2.06
SMD3YLR147C COS2P0CX12 379 aa2.17□□□□□ -2.06
SMD3YLR147C COS3P0CX13 379 aa2.17□□□□□ -2.06
SMD3YLR147C UGA1P17649 471 aa2.17□□□□□ -2.06
SMD3YLR147C CSM1P25651 190 aa2.17□□□□□ -2.06
SMD3YLR147C HMT1P38074 348 aa2.17□□□□□ -2.06
SMD3YLR147C ARN2P38724 620 aa2.17□□□□□ -2.06
SMD3YLR147C YHI9P38765 294 aa2.17□□□□□ -2.06
SMD3YLR147C GCD14P46959 383 aaPredicted RBP2.17□□□□□ -2.06
SMD3YLR147C YMR166CQ03829 368 aa2.17□□□□□ -2.06
SMD3YLR147C MYO5Q04439 1219 aaKnown RBP2.17□□□□□ -2.06
SMD3YLR147C GPN3Q06543 272 aa2.17□□□□□ -2.06
SMD3YLR147C YOL019WQ08157 551 aa2.17□□□□□ -2.06
SMD3YLR147C YPL150WQ12152 901 aa2.17□□□□□ -2.06
SMD3YLR147C FRS2P15625 503 aaKnown RBP2.16□□□□□ -2.06
SMD3YLR147C CSG2P35206 410 aa2.16□□□□□ -2.06
SMD3YLR147C PNC1P53184 216 aaKnown RBP2.16□□□□□ -2.06
SMD3YLR147C SUE1Q06524 206 aa2.16□□□□□ -2.06
SMD3YLR147C YOR283WQ12040 230 aaKnown RBP2.16□□□□□ -2.06
SMD3YLR147C YMR316C-AI2HB70 103 aa2.15□□□□□ -2.07
SMD3YLR147C TDH1P00360 332 aaKnown RBP2.15□□□□□ -2.07
SMD3YLR147C ILV1P00927 576 aaKnown RBP2.15□□□□□ -2.07
SMD3YLR147C RPS3P05750 240 aaKnown RBP2.15□□□□□ -2.07
SMD3YLR147C RAD10P06838 210 aa2.15□□□□□ -2.07
SMD3YLR147C TDA11P38854 504 aa2.15□□□□□ -2.07
SMD3YLR147C YGL185CP53100 379 aa2.15□□□□□ -2.07
SMD3YLR147C MND1P53102 219 aa2.15□□□□□ -2.07
SMD3YLR147C PEX31P53203 462 aa2.15□□□□□ -2.07
SMD3YLR147C CAB4P53332 305 aa2.15□□□□□ -2.07
SMD3YLR147C YNL260CP53846 198 aa2.15□□□□□ -2.07
SMD3YLR147C SPO77Q06134 477 aa2.15□□□□□ -2.07
SMD3YLR147C YEL009C-AA0A023PZF2 135 aa2.14□□□□□ -2.07
SMD3YLR147C SER33P40510 469 aa2.14□□□□□ -2.07
SMD3YLR147C DAN1P47178 298 aa2.14□□□□□ -2.07
SMD3YLR147C CDC14Q00684 551 aa2.14□□□□□ -2.07
SMD3YLR147C ERV41Q04651 352 aa2.14□□□□□ -2.07
SMD3YLR147C BEM2P39960 2167 aaKnown RBP2.13□□□□□ -2.07
SMD3YLR147C YAL064W-BO13512 126 aa2.13□□□□□ -2.07
SMD3YLR147C MEK1P24719 497 aaPredicted RBP2.13□□□□□ -2.07
SMD3YLR147C BMH1P29311 267 aaKnown RBP2.13□□□□□ -2.07
SMD3YLR147C COG3P40094 801 aa2.13□□□□□ -2.07
SMD3YLR147C NBP1P52919 319 aaPredicted RBP2.13□□□□□ -2.07
SMD3YLR147C CPD1P53314 239 aa2.13□□□□□ -2.07
SMD3YLR147C TRM44Q02648 567 aaKnown RBP2.13□□□□□ -2.07
SMD3YLR147C VBA1Q04301 562 aa2.13□□□□□ -2.07
SMD3YLR147C RPP0P05317 312 aaKnown RBP2.12□□□□□ -2.07
SMD3YLR147C RPC40P07703 335 aaKnown RBP2.12□□□□□ -2.07
SMD3YLR147C CAM1P29547 415 aaKnown RBP2.12□□□□□ -2.07
SMD3YLR147C SLM2P53955 656 aa2.12□□□□□ -2.07
SMD3YLR147C SFH1Q06168 426 aa2.12□□□□□ -2.07
SMD3YLR147C SEC10Q06245 871 aa2.12□□□□□ -2.07
SMD3YLR147C TY3A-GQ12173 290 aa2.12□□□□□ -2.07
SMD3YLR147C YPL247CQ12523 523 aa2.12□□□□□ -2.07
SMD3YLR147C TY3A-IQ99219 290 aa2.12□□□□□ -2.07
SMD3YLR147C PEX3P28795 441 aa2.11□□□□□ -2.07
SMD3YLR147C GDH2P33327 1092 aaKnown RBP2.11□□□□□ -2.07
SMD3YLR147C GON7P46984 123 aa2.11□□□□□ -2.07
SMD3YLR147C COS6P53344 381 aa2.11□□□□□ -2.07
SMD3YLR147C SMT3Q12306 101 aaKnown RBP2.11□□□□□ -2.07
SMD3YLR147C AI5_BETAQ9ZZX0 354 aa2.11□□□□□ -2.07
SMD3YLR147C DBP3P20447 523 aaKnown RBP2.1□□□□□ -2.07
SMD3YLR147C SCO1P23833 295 aa2.1□□□□□ -2.07
SMD3YLR147C ICL1P28240 557 aaPredicted RBP2.1□□□□□ -2.07
SMD3YLR147C MRPL40P36534 297 aa2.1□□□□□ -2.07
SMD3YLR147C NRG2P38082 220 aa2.1□□□□□ -2.07
SMD3YLR147C YHR045WP38775 560 aa2.1□□□□□ -2.07
SMD3YLR147C YJL016WP47072 561 aa2.1□□□□□ -2.07
SMD3YLR147C LSB1P53281 241 aa2.1□□□□□ -2.07
SMD3YLR147C YNL050CP53952 270 aa2.1□□□□□ -2.07
SMD3YLR147C YMR114CQ04471 368 aaKnown RBP2.1□□□□□ -2.07
SMD3YLR147C DCR2Q05924 578 aa2.1□□□□□ -2.07
SMD3YLR147C YOS9Q99220 542 aa2.1□□□□□ -2.07
SMD3YLR147C PPH21P23594 369 aa2.09□□□□□ -2.07
SMD3YLR147C DPB2P24482 689 aaPredicted RBP2.09□□□□□ -2.07
SMD3YLR147C POF1P25576 258 aa2.09□□□□□ -2.07
SMD3YLR147C NPT1P39683 429 aaKnown RBP2.09□□□□□ -2.07
SMD3YLR147C FCY21P40039 528 aa2.09□□□□□ -2.07
SMD3YLR147C FMP33P46998 180 aa2.09□□□□□ -2.07
SMD3YLR147C NBP35P52920 328 aa2.09□□□□□ -2.07
SMD3YLR147C SWS2P53937 143 aa2.09□□□□□ -2.07
SMD3YLR147C ATC1Q04005 294 aa2.09□□□□□ -2.07
SMD3YLR147C RPL4AP10664 362 aaKnown RBP2.08□□□□□ -2.08
SMD3YLR147C YSR3P23501 404 aa2.08□□□□□ -2.08
SMD3YLR147C SFC1P33303 322 aa2.08□□□□□ -2.08
SMD3YLR147C GRE3P38715 327 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SMD3YLR147C MRPL49P40858 161 aaPredicted RBP2.08□□□□□ -2.08
SMD3YLR147C AGX1P43567 385 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms