RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	SAL1	D6W196	494 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	ERD1	P16151	362 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	TPS2	P31688	896 aa	Known RBP	4.39	□□□□□ -1.71
SIS2	YKR072C	YCR087C-A	P37263	153 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	HMT1	P38074	348 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	DER1	P38307	211 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	MST28	P39552	234 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	AIM23	P47015	356 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	SBH2	P52871	88 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	BRR6	P53062	197 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	VHT1	P53241	593 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	COS1	P53822	381 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	YNL040W	P53960	456 aa	Predicted RBP	4.39	□□□□□ -1.71
SIS2	YKR072C	YPR098C	Q06089	161 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	YPR147C	Q06522	304 aa	Known RBP	4.39	□□□□□ -1.71
SIS2	YKR072C	TAF10	Q12030	206 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	RPN6	Q12377	434 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	YLR111W	Q12528	110 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	STH1	P32597	1359 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	USO1	P25386	1790 aa		4.39	□□□□□ -1.71
SIS2	YKR072C	BCY1	P07278	416 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SIS2	YKR072C	CDC43	P18898	376 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	CTS1	P29029	562 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	GLC7	P32598	312 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SIS2	YKR072C	VPS52	P39904	641 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	RTS2	P40962	232 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	QRI1	P43123	477 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	YGL235W	P53071	178 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	POP6	P53218	158 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	FYV6	P53913	173 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	YLR152C	P54072	576 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	DIG1	Q03063	452 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	TAZ1	Q06510	381 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	RPS3	P05750	240 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	SPT3	P06844	337 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	INO2	P26798	304 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	COG3	P40094	801 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	RSM25	P40496	264 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	GOR1	P53839	350 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	ARK1	P53974	638 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	RNY1	Q02933	434 aa	Known RBP	4.38	□□□□□ -1.71
SIS2	YKR072C	TFC7	Q12415	435 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	YPL119C-A	Q3E751	87 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	SIR4	P11978	1358 aa		4.38	□□□□□ -1.71
SIS2	YKR072C	SEC7	P11075	2009 aa	Known RBP	4.37	□□□□□ -1.71
SIS2	YKR072C	CBS2	P14905	389 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	PMT2	P31382	759 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YKL075C	P36083	450 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YAP3	P38749	330 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	KRE29	P40026	464 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	CTK3	P46963	296 aa	Predicted RBP	4.37	□□□□□ -1.71
SIS2	YKR072C	TRM9	P49957	279 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YPS5	P53057	165 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	RHO3	Q00245	231 aa	Known RBP	4.37	□□□□□ -1.71
SIS2	YKR072C	YMR181C	Q03231	154 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YMR166C	Q03829	368 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	TAF9	Q05027	157 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YEH2	Q07950	538 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	HNT3	Q08702	217 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	YDR018C	Q12185	396 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	EMP46	Q12396	444 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	PRM4	Q12498	284 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	TY3B-G	Q99315	1547 aa		4.37	□□□□□ -1.71
SIS2	YKR072C	RPS28B	P0C0X0	67 aa	Known RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	ASP3-2	P0CX77	362 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	ASP3-3	P0CX78	362 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	ASP3-4	P0CX79	362 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	ASP3-1	P0CZ17	362 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	SPS100	P13130	326 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	CPT1	P17898	393 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	SAM2	P19358	384 aa	Known RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	PPH21	P23594	369 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	RPL16A	P26784	199 aa	Known RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	PDC2	P32896	925 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	YBR096W	P38256	230 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	ATG12	P38316	186 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	VMA22	P38784	181 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	AVT4	P50944	713 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	TDA7	P53882	636 aa	Predicted RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	NRK1	P53915	240 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	TIM44	Q01852	431 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	DPP1	Q05521	289 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	YLR112W	Q12130	139 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	BSC1	Q12140	328 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	NSL1	Q12143	216 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	PNS1	Q12412	539 aa		4.36	□□□□□ -1.71
SIS2	YKR072C	NOT5	Q12514	560 aa	Predicted RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.36	□□□□□ -1.71
SIS2	YKR072C	RPN13	O13563	156 aa		4.35	□□□□□ -1.71
SIS2	YKR072C	DPM1	P14020	267 aa	Known RBP	4.35	□□□□□ -1.71
SIS2	YKR072C	ALK2	P32789	676 aa	Predicted RBP	4.35	□□□□□ -1.71
SIS2	YKR072C	KTI12	P34253	313 aa	Known RBP	4.35	□□□□□ -1.71
SIS2	YKR072C	AVT5	P38176	459 aa		4.35	□□□□□ -1.71
SIS2	YKR072C	RRP3	P38712	501 aa	Known RBP	4.35	□□□□□ -1.71
SIS2	YKR072C	WSC4	P38739	605 aa		4.35	□□□□□ -1.71
SIS2	YKR072C	YJR056C	P47115	236 aa		4.35	□□□□□ -1.71
SIS2	YKR072C	OST3	P48439	350 aa		4.35	□□□□□ -1.71
SIS2	YKR072C	YGL204C	P53089	101 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms