RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YHC1Q05900 231 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W YLR012CQ07927 99 aa2.03□□□□□ -2.08
SNU114YKL173W YPL199CQ08954 240 aa2.03□□□□□ -2.08
SNU114YKL173W EMP46Q12396 444 aa2.03□□□□□ -2.08
SNU114YKL173W VPS1P21576 704 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W RPL24BP24000 155 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W POP5P28005 173 aa2.03□□□□□ -2.08
SNU114YKL173W MRPL6P32904 214 aa2.03□□□□□ -2.08
SNU114YKL173W MCH2P36032 473 aa2.03□□□□□ -2.08
SNU114YKL173W SRP102P36057 244 aaPredicted RBP2.03□□□□□ -2.08
SNU114YKL173W AVT5P38176 459 aa2.03□□□□□ -2.08
SNU114YKL173W RPH1P39956 796 aa2.03□□□□□ -2.08
SNU114YKL173W YER184CP39961 794 aa2.03□□□□□ -2.08
SNU114YKL173W LCB3P47013 409 aa2.03□□□□□ -2.08
SNU114YKL173W YJR111CP47148 283 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W CDH1P53197 566 aa2.03□□□□□ -2.08
SNU114YKL173W PRP38Q00723 242 aaPredicted RBP2.03□□□□□ -2.08
SNU114YKL173W TRM82Q03774 444 aa2.03□□□□□ -2.08
SNU114YKL173W YDR248CQ03786 193 aa2.03□□□□□ -2.08
SNU114YKL173W YDR415CQ04033 374 aaPredicted RBP2.03□□□□□ -2.08
SNU114YKL173W YMR114CQ04471 368 aaKnown RBP2.03□□□□□ -2.08
SNU114YKL173W TAZ1Q06510 381 aa2.03□□□□□ -2.08
SNU114YKL173W RSA1Q08932 381 aa2.03□□□□□ -2.08
SNU114YKL173W TMS1Q12116 473 aa2.03□□□□□ -2.08
SNU114YKL173W YBR298C-AQ8TGK4 73 aa2.03□□□□□ -2.08
SNU114YKL173W RAD50P12753 1312 aa2.02□□□□□ -2.09
SNU114YKL173W RPS8AP0CX39 200 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W RPS8BP0CX40 200 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W FUN26P31381 517 aa2.02□□□□□ -2.09
SNU114YKL173W ACB1P31787 87 aa2.02□□□□□ -2.09
SNU114YKL173W AGA1P32323 725 aa2.02□□□□□ -2.09
SNU114YKL173W SSO1P32867 290 aa2.02□□□□□ -2.09
SNU114YKL173W YOX1P34161 385 aa2.02□□□□□ -2.09
SNU114YKL173W CBT1P36038 271 aaPredicted RBP2.02□□□□□ -2.09
SNU114YKL173W VMA22P38784 181 aa2.02□□□□□ -2.09
SNU114YKL173W GIM4P40005 111 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W ALG8P40351 577 aa2.02□□□□□ -2.09
SNU114YKL173W MOG1P47123 218 aa2.02□□□□□ -2.09
SNU114YKL173W YJR085CP47131 105 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W YGR042WP53227 271 aa2.02□□□□□ -2.09
SNU114YKL173W DDC1Q08949 612 aa2.02□□□□□ -2.09
SNU114YKL173W WIP1Q2V2P8 89 aa2.02□□□□□ -2.09
SNU114YKL173W MEX67Q99257 599 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W RPS14AP06367 137 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W STE18P18852 110 aa2.02□□□□□ -2.09
SNU114YKL173W YSR3P23501 404 aa2.02□□□□□ -2.09
SNU114YKL173W RFA3P26755 122 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W AST1P35183 429 aa2.02□□□□□ -2.09
SNU114YKL173W YNK1P36010 153 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W YKL071WP36086 256 aa2.02□□□□□ -2.09
SNU114YKL173W PET8P38921 284 aa2.02□□□□□ -2.09
SNU114YKL173W RPS14BP39516 138 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W PTI1P39927 425 aaPredicted RBP2.02□□□□□ -2.09
SNU114YKL173W YJR030CP47101 745 aa2.02□□□□□ -2.09
SNU114YKL173W YJR141WP47172 347 aaPredicted RBP2.02□□□□□ -2.09
SNU114YKL173W MST27P53176 234 aa2.02□□□□□ -2.09
SNU114YKL173W JAC1P53193 184 aa2.02□□□□□ -2.09
SNU114YKL173W NQM1P53228 333 aaPredicted RBP2.02□□□□□ -2.09
SNU114YKL173W CAF40P53829 373 aa2.02□□□□□ -2.09
SNU114YKL173W MFG1Q07684 458 aa2.02□□□□□ -2.09
SNU114YKL173W SAM4Q08985 325 aaKnown RBP2.02□□□□□ -2.09
SNU114YKL173W YGK3Q12222 375 aaPredicted RBP2.02□□□□□ -2.09
SNU114YKL173W SFM1Q12314 213 aa2.02□□□□□ -2.09
SNU114YKL173W YDL199CQ12407 687 aa2.02□□□□□ -2.09
SNU114YKL173W FKS3Q04952 1785 aa2.02□□□□□ -2.09
SNU114YKL173W TUS1Q06412 1307 aa2.02□□□□□ -2.09
SNU114YKL173W YDR157WA0A023PZE8 133 aa2.01□□□□□ -2.09
SNU114YKL173W RPL20AP0CX23 172 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W RPL20BP0CX24 172 aaPredicted RBP2.01□□□□□ -2.09
SNU114YKL173W URA6P15700 204 aa2.01□□□□□ -2.09
SNU114YKL173W CBF1P17106 351 aa2.01□□□□□ -2.09
SNU114YKL173W CDC13P32797 924 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W ATG12P38316 186 aa2.01□□□□□ -2.09
SNU114YKL173W VAB2P40003 282 aa2.01□□□□□ -2.09
SNU114YKL173W SMB1P40018 196 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W CIN5P40917 295 aa2.01□□□□□ -2.09
SNU114YKL173W YJR149WP47177 404 aa2.01□□□□□ -2.09
SNU114YKL173W BNS1P50084 137 aa2.01□□□□□ -2.09
SNU114YKL173W MRM2P53123 320 aa2.01□□□□□ -2.09
SNU114YKL173W YNR066CP53752 436 aa2.01□□□□□ -2.09
SNU114YKL173W VAC7P53950 1165 aa2.01□□□□□ -2.09
SNU114YKL173W OST6Q03723 332 aa2.01□□□□□ -2.09
SNU114YKL173W BER1Q06688 274 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W YOR376WQ08900 122 aa2.01□□□□□ -2.09
SNU114YKL173W YPQ1Q12010 308 aa2.01□□□□□ -2.09
SNU114YKL173W BTS1Q12051 335 aa2.01□□□□□ -2.09
SNU114YKL173W AI5_BETAQ9ZZX0 354 aa2.01□□□□□ -2.09
SNU114YKL173W QCR2P07257 368 aa2.01□□□□□ -2.09
SNU114YKL173W ASP3-2P0CX77 362 aa2.01□□□□□ -2.09
SNU114YKL173W ASP3-3P0CX78 362 aa2.01□□□□□ -2.09
SNU114YKL173W ASP3-4P0CX79 362 aa2.01□□□□□ -2.09
SNU114YKL173W ASP3-1P0CZ17 362 aa2.01□□□□□ -2.09
SNU114YKL173W PRO3P32263 286 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W SKG6P32900 734 aaPredicted RBP2.01□□□□□ -2.09
SNU114YKL173W PRX1P34227 261 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W VPS21P36017 210 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W NAT2P37293 288 aa2.01□□□□□ -2.09
SNU114YKL173W YBP1P38315 674 aa2.01□□□□□ -2.09
SNU114YKL173W MIC12P38341 106 aa2.01□□□□□ -2.09
SNU114YKL173W SSH1P38353 490 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms