RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W CUP2P15315 225 aa2.02□□□□□ -2.09
NUP100YKL068W SPO11P23179 398 aa2.02□□□□□ -2.09
NUP100YKL068W LSB5P25369 354 aa2.02□□□□□ -2.09
NUP100YKL068W NUF2P33895 451 aa2.02□□□□□ -2.09
NUP100YKL068W DER1P38307 211 aa2.02□□□□□ -2.09
NUP100YKL068W USE1P53146 245 aa2.02□□□□□ -2.09
NUP100YKL068W MAL13P53338 473 aa2.02□□□□□ -2.09
NUP100YKL068W CPR8P53728 308 aa2.02□□□□□ -2.09
NUP100YKL068W ASI3P53983 676 aa2.02□□□□□ -2.09
NUP100YKL068W YMR114CQ04471 368 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W TAZ1Q06510 381 aa2.02□□□□□ -2.09
NUP100YKL068W ACF2Q12168 779 aa2.02□□□□□ -2.09
NUP100YKL068W YDL009CQ12210 107 aa2.02□□□□□ -2.09
NUP100YKL068W RPS28AQ3E7X9 67 aaPredicted RBP2.02□□□□□ -2.09
NUP100YKL068W IZH4Q99393 312 aa2.02□□□□□ -2.09
NUP100YKL068W SAL1D6W196 494 aa2.02□□□□□ -2.09
NUP100YKL068W DSF1P0CX08 502 aa2.02□□□□□ -2.09
NUP100YKL068W YNR073CP0CX09 502 aa2.02□□□□□ -2.09
NUP100YKL068W MTF1P14908 341 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W DCC1P25559 380 aa2.02□□□□□ -2.09
NUP100YKL068W RPL16BP26785 198 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W ELM1P32801 640 aa2.02□□□□□ -2.09
NUP100YKL068W FRE2P36033 711 aa2.02□□□□□ -2.09
NUP100YKL068W MCR1P36060 302 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W RIB5P38145 238 aa2.02□□□□□ -2.09
NUP100YKL068W CUE1P38428 203 aa2.02□□□□□ -2.09
NUP100YKL068W GRE3P38715 327 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
NUP100YKL068W YHR035WP38769 630 aa2.02□□□□□ -2.09
NUP100YKL068W ASG7P46993 209 aa2.02□□□□□ -2.09
NUP100YKL068W YJL043WP47053 257 aa2.02□□□□□ -2.09
NUP100YKL068W YJR056CP47115 236 aa2.02□□□□□ -2.09
NUP100YKL068W YGL204CP53089 101 aa2.02□□□□□ -2.09
NUP100YKL068W YGR042WP53227 271 aa2.02□□□□□ -2.09
NUP100YKL068W SMX3P54999 86 aaPredicted RBP2.02□□□□□ -2.09
NUP100YKL068W SNX41Q04053 625 aa2.02□□□□□ -2.09
NUP100YKL068W ECI1Q05871 280 aa2.02□□□□□ -2.09
NUP100YKL068W SFH1Q06168 426 aa2.02□□□□□ -2.09
NUP100YKL068W HEM25Q07534 307 aa2.02□□□□□ -2.09
NUP100YKL068W MUM3Q08750 479 aa2.02□□□□□ -2.09
NUP100YKL068W YOR114WQ12219 294 aa2.02□□□□□ -2.09
NUP100YKL068W DCN1Q12395 269 aa2.02□□□□□ -2.09
NUP100YKL068W NOT5Q12514 560 aaPredicted RBP2.02□□□□□ -2.09
NUP100YKL068W LSO2Q3E772 92 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W MOT1P32333 1867 aa2.02□□□□□ -2.09
NUP100YKL068W BRR2P32639 2163 aaKnown RBP2.02□□□□□ -2.09
NUP100YKL068W AQY1P0CD91 305 aa2.01□□□□□ -2.09
NUP100YKL068W URA6P15700 204 aa2.01□□□□□ -2.09
NUP100YKL068W MAK32P23060 363 aa2.01□□□□□ -2.09
NUP100YKL068W PPH21P23594 369 aa2.01□□□□□ -2.09
NUP100YKL068W TRR1P29509 319 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W MUD1P32605 298 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W SPT4P32914 102 aaPredicted RBP2.01□□□□□ -2.09
NUP100YKL068W NTF2P33331 125 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W TOD6P34219 525 aa2.01□□□□□ -2.09
NUP100YKL068W JEN1P36035 616 aa2.01□□□□□ -2.09
NUP100YKL068W ECM13P38195 257 aa2.01□□□□□ -2.09
NUP100YKL068W YBR096WP38256 230 aa2.01□□□□□ -2.09
NUP100YKL068W COG3P40094 801 aa2.01□□□□□ -2.09
NUP100YKL068W YIL169CP40442 995 aa2.01□□□□□ -2.09
NUP100YKL068W MRPL49P40858 161 aaPredicted RBP2.01□□□□□ -2.09
NUP100YKL068W QRI1P43123 477 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W TRM9P49957 279 aa2.01□□□□□ -2.09
NUP100YKL068W ORC5P50874 479 aa2.01□□□□□ -2.09
NUP100YKL068W MMS2P53152 137 aa2.01□□□□□ -2.09
NUP100YKL068W NQM1P53228 333 aaPredicted RBP2.01□□□□□ -2.09
NUP100YKL068W NUP100Q02629 959 aa2.01□□□□□ -2.09
NUP100YKL068W GLO2Q05584 274 aa2.01□□□□□ -2.09
NUP100YKL068W PFA4Q12006 378 aa2.01□□□□□ -2.09
NUP100YKL068W EXG1P23776 448 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W SNC1P31109 117 aa2.01□□□□□ -2.09
NUP100YKL068W HOM6P31116 359 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W PMT2P31382 759 aa2.01□□□□□ -2.09
NUP100YKL068W SDS24P38314 527 aa2.01□□□□□ -2.09
NUP100YKL068W VMA22P38784 181 aa2.01□□□□□ -2.09
NUP100YKL068W DHH1P39517 506 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W PAC2P39937 518 aa2.01□□□□□ -2.09
NUP100YKL068W IRC24P40580 263 aa2.01□□□□□ -2.09
NUP100YKL068W YFH7P43591 353 aa2.01□□□□□ -2.09
NUP100YKL068W PRP24P49960 444 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W SPC24Q04477 213 aa2.01□□□□□ -2.09
NUP100YKL068W RIF2Q06208 395 aa2.01□□□□□ -2.09
NUP100YKL068W TPO3Q06451 622 aa2.01□□□□□ -2.09
NUP100YKL068W YCT1Q12235 531 aa2.01□□□□□ -2.09
NUP100YKL068W DUR1,2P32528 1835 aaKnown RBP2.01□□□□□ -2.09
NUP100YKL068W BI2P03873 423 aa2□□□□□ -2.09
NUP100YKL068W CAP2P13517 287 aa2□□□□□ -2.09
NUP100YKL068W TFS1P14306 219 aa2□□□□□ -2.09
NUP100YKL068W PHO80P20052 293 aa2□□□□□ -2.09
NUP100YKL068W YCR100CP25606 316 aa2□□□□□ -2.09
NUP100YKL068W LOS1P33418 1100 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W TIR2P33890 251 aa2□□□□□ -2.09
NUP100YKL068W GOS1P38736 223 aa2□□□□□ -2.09
NUP100YKL068W CYC2P38909 366 aa2□□□□□ -2.09
NUP100YKL068W RSM25P40496 264 aa2□□□□□ -2.09
NUP100YKL068W DFG10P40526 253 aa2□□□□□ -2.09
NUP100YKL068W CTK3P46963 296 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W YJR141WP47172 347 aaPredicted RBP2□□□□□ -2.09
NUP100YKL068W NUP57P48837 541 aa2□□□□□ -2.09
NUP100YKL068W MIC26P50087 233 aa2□□□□□ -2.09
NUP100YKL068W NBP35P52920 328 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms