RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	RPS3	P05750	240 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	STE7	P06784	515 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	RPS18A	P0CX55	146 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	RPS18B	P0CX56	146 aa	Predicted RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	ASP3-2	P0CX77	362 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	ASP3-3	P0CX78	362 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	ASP3-4	P0CX79	362 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	ASP3-1	P0CZ17	362 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	ARF2	P19146	181 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	RNA15	P25299	296 aa	Predicted RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	ACB1	P31787	87 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	MRPL6	P32904	214 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	MRPS9	P38120	278 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	SRP14	P38985	146 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	FRT2	P39734	528 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	PTI1	P39927	425 aa	Predicted RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	YER184C	P39961	794 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	GIM4	P40005	111 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	TAD2	P47058	250 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	YPT32	P51996	222 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	NBP1	P52919	319 aa	Predicted RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	VEL1	P53058	206 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	COS1	P53822	381 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	PRP38	Q00723	242 aa	Predicted RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	VBA1	Q04301	562 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	SEC13	Q04491	297 aa	Known RBP	2.39	□□□□□ -2.03
VHR1	YIL056W	PLB3	Q08108	686 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	ALE1	Q08548	619 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	YOR338W	Q99326	363 aa		2.39	□□□□□ -2.03
VHR1	YIL056W	CHA1	P25379	360 aa	Known RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	ANR2	P36090	516 aa	Predicted RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	BMT2	P38278	337 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	SOK1	P40317	901 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	ADO1	P47143	340 aa	Known RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	MGA1	P53050	456 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YPS5	P53057	165 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	LST7	P53237	242 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YLR460C	P54007	376 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YDR209C	Q03480	137 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	DDC1	Q08949	612 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	PET20	Q99373	253 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	RPP0	P05317	312 aa	Known RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	PUT1	P09368	476 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	URA6	P15700	204 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YCR102C	P25608	368 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	RPL16A	P26784	199 aa	Known RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	FUN26	P31381	517 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	CSE1	P33307	960 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YKL187C	P34231	750 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	TDA11	P38854	504 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YCH1	P42937	148 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YJR079W	P47126	109 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	VMA10	P48836	114 aa	Known RBP	2.38	□□□□□ -2.03
VHR1	YIL056W	YGR042W	P53227	271 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	CDC14	Q00684	551 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YPL077C	Q02831	240 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	SPC24	Q04477	213 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YDR115W	Q04598	105 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	CSM3	Q04659	317 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	YET3	Q07451	203 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	POM33	Q12164	279 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	JLP1	Q12358	412 aa		2.38	□□□□□ -2.03
VHR1	YIL056W	ILV1	P00927	576 aa	Known RBP	2.37	□□□□□ -2.03
VHR1	YIL056W	DCC1	P25559	380 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	TRR1	P29509	319 aa	Known RBP	2.37	□□□□□ -2.03
VHR1	YIL056W	ZRT1	P32804	376 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	HMT1	P38074	348 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	LSM12	P38828	187 aa	Known RBP	2.37	□□□□□ -2.03
VHR1	YIL056W	SEO1	P39709	593 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	PEX22	P39718	180 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	SMB1	P40018	196 aa	Known RBP	2.37	□□□□□ -2.03
VHR1	YIL056W	BMT5	P40493	336 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	MIC26	P50087	233 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	CPD1	P53314	239 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	IRC4	Q03036	179 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	YMR114C	Q04471	368 aa	Known RBP	2.37	□□□□□ -2.03
VHR1	YIL056W	FSH2	Q05015	223 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	DCN1	Q12395	269 aa		2.37	□□□□□ -2.03
VHR1	YIL056W	RPL31A	P0C2H8	113 aa	Known RBP	2.36	□□□□□ -2.03
VHR1	YIL056W	POF1	P25576	258 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	EHD3	P28817	500 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	MKK1	P32490	508 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	RBG1	P39729	369 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	RPL10	P41805	221 aa	Known RBP	2.36	□□□□□ -2.03
VHR1	YIL056W	KEG1	P43614	200 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	CIN2	P46670	268 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	PRP24	P49960	444 aa	Known RBP	2.36	□□□□□ -2.03
VHR1	YIL056W	SNO1	Q03144	224 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	YOR114W	Q12219	294 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	DET1	Q99288	334 aa	Known RBP	2.36	□□□□□ -2.03
VHR1	YIL056W	DSF1	P0CX08	502 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	YNR073C	P0CX09	502 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.36	□□□□□ -2.03	not detected
VHR1	YIL056W	HOM6	P31116	359 aa	Known RBP	2.36	□□□□□ -2.03
VHR1	YIL056W	VPH2	P32341	215 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	YKL063C	P35725	167 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	YBR241C	P38142	488 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	SHG1	P38337	142 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	YHR035W	P38769	630 aa		2.36	□□□□□ -2.03
VHR1	YIL056W	VMA22	P38784	181 aa		2.36	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms