RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	YGL185C	P53100	379 aa		2.09	□□□□□ -2.07
RSM27	YGR215W	SPO19	Q03029	223 aa		2.09	□□□□□ -2.07
RSM27	YGR215W	YEL009C-A	A0A023PZF2	135 aa		2.08	□□□□□ -2.08
RSM27	YGR215W	ICL1	P28240	557 aa	Predicted RBP	2.08	□□□□□ -2.08
RSM27	YGR215W	ARN2	P38724	620 aa		2.08	□□□□□ -2.08
RSM27	YGR215W	MNN5	P46982	586 aa		2.08	□□□□□ -2.08
RSM27	YGR215W	GRH1	Q04410	372 aa	Known RBP	2.08	□□□□□ -2.08
RSM27	YGR215W	FCF1	Q05498	189 aa	Predicted RBP	2.08	□□□□□ -2.08
RSM27	YGR215W	PLB3	Q08108	686 aa		2.08	□□□□□ -2.08
RSM27	YGR215W	YBL112C	Q3E7Y4	105 aa		2.08	□□□□□ -2.08
RSM27	YGR215W	LOC1	P43586	204 aa	Predicted RBP	2.07	□□□□□ -2.08
RSM27	YGR215W	YJR141W	P47172	347 aa	Predicted RBP	2.07	□□□□□ -2.08
RSM27	YGR215W	CPD1	P53314	239 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	YNL260C	P53846	198 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	CTS2	Q06350	511 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	LOA1	Q06508	300 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	SUE1	Q06524	206 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	ISD11	Q6Q560	94 aa		2.07	□□□□□ -2.08
RSM27	YGR215W	TDH1	P00360	332 aa	Known RBP	2.06	□□□□□ -2.08
RSM27	YGR215W	CAM1	P29547	415 aa	Known RBP	2.06	□□□□□ -2.08
RSM27	YGR215W	YJR146W	P47174	117 aa		2.06	□□□□□ -2.08
RSM27	YGR215W	ECM18	Q04623	453 aa		2.06	□□□□□ -2.08
RSM27	YGR215W	MRPL23	Q12487	163 aa	Predicted RBP	2.06	□□□□□ -2.08
RSM27	YGR215W	RPS3	P05750	240 aa	Known RBP	2.05	□□□□□ -2.08
RSM27	YGR215W	RAD10	P06838	210 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	YSR3	P23501	404 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	CSG2	P35206	410 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	YGP1	P38616	354 aa	Known RBP	2.05	□□□□□ -2.08
RSM27	YGR215W	VPS45	P38932	577 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	IBA57	P47158	497 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	VPS68	Q12016	184 aa		2.05	□□□□□ -2.08
RSM27	YGR215W	TOM40	P23644	387 aa	Known RBP	2.04	□□□□□ -2.08
RSM27	YGR215W	MRPL40	P36534	297 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	HMT1	P38074	348 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	SDC1	Q03323	175 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	ERV41	Q04651	352 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	SFH1	Q06168	426 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	BCP1	Q06338	283 aa		2.04	□□□□□ -2.08
RSM27	YGR215W	RPC40	P07703	335 aa	Known RBP	2.03	□□□□□ -2.08
RSM27	YGR215W	FRS2	P15625	503 aa	Known RBP	2.03	□□□□□ -2.08
RSM27	YGR215W	MEK1	P24719	497 aa	Predicted RBP	2.03	□□□□□ -2.08
RSM27	YGR215W	CLB6	P32943	380 aa		2.03	□□□□□ -2.08
RSM27	YGR215W	SER33	P40510	469 aa		2.03	□□□□□ -2.08
RSM27	YGR215W	VBA1	Q04301	562 aa		2.03	□□□□□ -2.08
RSM27	YGR215W	YOR268C	Q08734	132 aa		2.03	□□□□□ -2.08
RSM27	YGR215W	YAL064W-B	O13512	126 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	RPL26A	P05743	127 aa	Known RBP	2.02	□□□□□ -2.09
RSM27	YGR215W	BMH1	P29311	267 aa	Known RBP	2.02	□□□□□ -2.09
RSM27	YGR215W	GON7	P46984	123 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	NIF3	P53081	288 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	RPL26B	P53221	127 aa	Known RBP	2.02	□□□□□ -2.09
RSM27	YGR215W	ARP5	P53946	755 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	SLM2	P53955	656 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	CDC14	Q00684	551 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	MYO5	Q04439	1219 aa	Known RBP	2.02	□□□□□ -2.09
RSM27	YGR215W	SEC10	Q06245	871 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	YLR413W	Q06689	675 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	TY3A-G	Q12173	290 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	TY3A-I	Q99219	290 aa		2.02	□□□□□ -2.09
RSM27	YGR215W	BEM2	P39960	2167 aa	Known RBP	2.01	□□□□□ -2.09
RSM27	YGR215W	DPM1	P14020	267 aa	Known RBP	2.01	□□□□□ -2.09
RSM27	YGR215W	POF1	P25576	258 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	PEX3	P28795	441 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	YHI9	P38765	294 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	DAN1	P47178	298 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	SPO77	Q06134	477 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	PER33	Q12144	273 aa		2.01	□□□□□ -2.09
RSM27	YGR215W	DBP3	P20447	523 aa	Known RBP	2	□□□□□ -2.09
RSM27	YGR215W	DPB2	P24482	689 aa	Predicted RBP	2	□□□□□ -2.09
RSM27	YGR215W	NPT1	P39683	429 aa	Known RBP	2	□□□□□ -2.09
RSM27	YGR215W	YMR114C	Q04471	368 aa	Known RBP	2	□□□□□ -2.09
RSM27	YGR215W	ARV1	Q06541	321 aa		2	□□□□□ -2.09
RSM27	YGR215W	FMP16	Q12497	93 aa		2	□□□□□ -2.09
RSM27	YGR215W	YOS9	Q99220	542 aa		2	□□□□□ -2.09
RSM27	YGR215W	SFC1	P33303	322 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.99	□□□□□ -2.09	not detected
RSM27	YGR215W	FMP33	P46998	180 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	YJL028W	P47062	111 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	MND1	P53102	219 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	SPP2	Q02521	185 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	CGI121	Q03705	181 aa	Known RBP	1.99	□□□□□ -2.09
RSM27	YGR215W	NOT5	Q12514	560 aa	Predicted RBP	1.99	□□□□□ -2.09
RSM27	YGR215W	YPL247C	Q12523	523 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	AI5_BETA	Q9ZZX0	354 aa		1.99	□□□□□ -2.09
RSM27	YGR215W	RPP0	P05317	312 aa	Known RBP	1.98	□□□□□ -2.09
RSM27	YGR215W	RPL4A	P10664	362 aa	Known RBP	1.98	□□□□□ -2.09
RSM27	YGR215W	YKL070W	P36087	169 aa		1.98	□□□□□ -2.09
RSM27	YGR215W	MAL32	P38158	584 aa		1.98	□□□□□ -2.09
RSM27	YGR215W	MRX5	P47007	382 aa		1.98	□□□□□ -2.09
RSM27	YGR215W	RPL4B	P49626	362 aa	Known RBP	1.98	□□□□□ -2.09
RSM27	YGR215W	TIM21	P53220	239 aa		1.98	□□□□□ -2.09
RSM27	YGR215W	MAL12	P53341	584 aa		1.98	□□□□□ -2.09
RSM27	YGR215W	TRM44	Q02648	567 aa	Known RBP	1.98	□□□□□ -2.09
RSM27	YGR215W	YOR283W	Q12040	230 aa	Known RBP	1.98	□□□□□ -2.09
RSM27	YGR215W	COS2	P0CX12	379 aa		1.97	□□□□□ -2.09
RSM27	YGR215W	COS3	P0CX13	379 aa		1.97	□□□□□ -2.09
RSM27	YGR215W	YHL049C	P38722	271 aa		1.97	□□□□□ -2.09
RSM27	YGR215W	MDM34	P53083	459 aa		1.97	□□□□□ -2.09
RSM27	YGR215W	LSB1	P53281	241 aa		1.97	□□□□□ -2.09
RSM27	YGR215W	CAB4	P53332	305 aa		1.97	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms