RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SNT309Q06091 175 aaPredicted RBP2.97□□□□□ -1.93
CDC40YDR364C RRG8Q06109 277 aa2.97□□□□□ -1.93
CDC40YDR364C DTD1Q07648 150 aaKnown RBP2.97□□□□□ -1.93
CDC40YDR364C LOT6Q07923 191 aa2.97□□□□□ -1.93
CDC40YDR364C LDS2Q08218 356 aa2.97□□□□□ -1.93
CDC40YDR364C VIK1Q12045 647 aa2.97□□□□□ -1.93
CDC40YDR364C YOR342CQ12182 319 aa2.97□□□□□ -1.93
CDC40YDR364C YDL199CQ12407 687 aa2.97□□□□□ -1.93
CDC40YDR364C YPR064WQ12492 139 aa2.97□□□□□ -1.93
CDC40YDR364C MHF2Q3E829 80 aa2.97□□□□□ -1.93
CDC40YDR364C FSH3Q99369 266 aa2.97□□□□□ -1.93
CDC40YDR364C BEM2P39960 2167 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C YPR096CO13587 100 aa2.96□□□□□ -1.94
CDC40YDR364C TIM9O74700 87 aa2.96□□□□□ -1.94
CDC40YDR364C CAR2P07991 424 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C RPL18AP0CX49 186 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C RPL18BP0CX50 186 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C RPL12AP0CX53 165 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C RPL12BP0CX54 165 aa2.96□□□□□ -1.94
CDC40YDR364C ARF1P11076 181 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C HNM1P19807 563 aa2.96□□□□□ -1.94
CDC40YDR364C MRPS28P21771 286 aa2.96□□□□□ -1.94
CDC40YDR364C AIM17P23180 465 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C PPH21P23594 369 aa2.96□□□□□ -1.94
CDC40YDR364C YCR007CP25354 239 aa2.96□□□□□ -1.94
CDC40YDR364C RIB1P38066 345 aa2.96□□□□□ -1.94
CDC40YDR364C WSC4P38739 605 aa2.96□□□□□ -1.94
CDC40YDR364C TDA11P38854 504 aa2.96□□□□□ -1.94
CDC40YDR364C LYS1P38998 373 aaRIP-Chip data2.96□□□□□ -1.94not detected
CDC40YDR364C MET30P39014 640 aa2.96□□□□□ -1.94
CDC40YDR364C PRM10P42946 383 aa2.96□□□□□ -1.94
CDC40YDR364C AGP3P43548 558 aa2.96□□□□□ -1.94
CDC40YDR364C CIS3P47001 227 aa2.96□□□□□ -1.94
CDC40YDR364C RAD17P48581 401 aa2.96□□□□□ -1.94
CDC40YDR364C PMT5P52867 743 aa2.96□□□□□ -1.94
CDC40YDR364C YIP1P53039 248 aa2.96□□□□□ -1.94
CDC40YDR364C YNL181WP53878 407 aa2.96□□□□□ -1.94
CDC40YDR364C APC4Q04601 652 aa2.96□□□□□ -1.94
CDC40YDR364C BOP2Q06150 570 aa2.96□□□□□ -1.94
CDC40YDR364C MFG1Q07684 458 aa2.96□□□□□ -1.94
CDC40YDR364C YOL131WQ08270 108 aa2.96□□□□□ -1.94
CDC40YDR364C WTM1Q12363 437 aaKnown RBP2.96□□□□□ -1.94
CDC40YDR364C LAG2Q92325 660 aa2.96□□□□□ -1.94
CDC40YDR364C ACC1Q00955 2233 aaKnown RBP2.95□□□□□ -1.94
CDC40YDR364C TPK3P05986 398 aa2.95□□□□□ -1.94
CDC40YDR364C RHO1P06780 209 aaKnown RBP2.95□□□□□ -1.94
CDC40YDR364C STE7P06784 515 aa2.95□□□□□ -1.94
CDC40YDR364C CBS2P14905 389 aa2.95□□□□□ -1.94
CDC40YDR364C MER1P16523 270 aa2.95□□□□□ -1.94
CDC40YDR364C FAR1P21268 830 aa2.95□□□□□ -1.94
CDC40YDR364C MEK1P24719 497 aaPredicted RBP2.95□□□□□ -1.94
CDC40YDR364C CTR86P25355 563 aa2.95□□□□□ -1.94
CDC40YDR364C UBC8P28263 218 aa2.95□□□□□ -1.94
CDC40YDR364C NUF2P33895 451 aa2.95□□□□□ -1.94
CDC40YDR364C LYS12P40495 371 aaKnown RBP2.95□□□□□ -1.94
CDC40YDR364C LOC1P43586 204 aaPredicted RBP2.95□□□□□ -1.94
CDC40YDR364C FAR7P43592 221 aa2.95□□□□□ -1.94
CDC40YDR364C PAC10P48363 199 aa2.95□□□□□ -1.94
CDC40YDR364C IGO1P53897 168 aa2.95□□□□□ -1.94
CDC40YDR364C SAM50P53969 484 aa2.95□□□□□ -1.94
CDC40YDR364C SPR6Q01684 191 aa2.95□□□□□ -1.94
CDC40YDR364C BET5Q03630 159 aa2.95□□□□□ -1.94
CDC40YDR364C CAC2Q04199 468 aa2.95□□□□□ -1.94
CDC40YDR364C YML096WQ04489 525 aa2.95□□□□□ -1.94
CDC40YDR364C RRN11Q04712 507 aa2.95□□□□□ -1.94
CDC40YDR364C RSA1Q08932 381 aa2.95□□□□□ -1.94
CDC40YDR364C YPR022CQ12139 1133 aa2.95□□□□□ -1.94
CDC40YDR364C YDR262WQ12331 272 aa2.95□□□□□ -1.94
CDC40YDR364C PAA1Q12447 191 aaKnown RBP2.95□□□□□ -1.94
CDC40YDR364C YPR1Q12458 312 aa2.95□□□□□ -1.94
CDC40YDR364C RRP12Q12754 1228 aaKnown RBP2.95□□□□□ -1.94
CDC40YDR364C ZWF1P11412 505 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C DEG1P31115 442 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C ACH1P32316 526 aa2.94□□□□□ -1.94
CDC40YDR364C VPH2P32341 215 aa2.94□□□□□ -1.94
CDC40YDR364C ERG1P32476 496 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C MKK1P32490 508 aa2.94□□□□□ -1.94
CDC40YDR364C CDC13P32797 924 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C MNS1P32906 549 aa2.94□□□□□ -1.94
CDC40YDR364C SUI1P32911 108 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C GDH2P33327 1092 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C ECT1P33412 323 aa2.94□□□□□ -1.94
CDC40YDR364C FMP46P36141 133 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C FET3P38993 636 aa2.94□□□□□ -1.94
CDC40YDR364C AIM2P39721 246 aa2.94□□□□□ -1.94
CDC40YDR364C MPM1P40364 252 aa2.94□□□□□ -1.94
CDC40YDR364C YRB2P40517 327 aa2.94□□□□□ -1.94
CDC40YDR364C RPL10P41805 221 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C HOC1P47124 396 aa2.94□□□□□ -1.94
CDC40YDR364C YGR168CP53293 376 aa2.94□□□□□ -1.94
CDC40YDR364C TMA20P89886 181 aaPredicted RBP2.94□□□□□ -1.94
CDC40YDR364C IZH1Q03419 316 aa2.94□□□□□ -1.94
CDC40YDR364C RSN1Q03516 953 aa2.94□□□□□ -1.94
CDC40YDR364C MSS11Q03825 758 aa2.94□□□□□ -1.94
CDC40YDR364C YDR415CQ04033 374 aaPredicted RBP2.94□□□□□ -1.94
CDC40YDR364C SPO77Q06134 477 aa2.94□□□□□ -1.94
CDC40YDR364C YLR173WQ06247 608 aa2.94□□□□□ -1.94
CDC40YDR364C ATG17Q06410 417 aa2.94□□□□□ -1.94
CDC40YDR364C RBD2Q12270 262 aa2.94□□□□□ -1.94
CDC40YDR364C SFM1Q12314 213 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms