RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D RFT1P38206 574 aaPredicted RBP2.54□□□□□ -2
YDR034C-DYDR034C-D BNS1P50084 137 aa2.54□□□□□ -2
YDR034C-DYDR034C-D SWC4P53201 476 aa2.54□□□□□ -2
YDR034C-DYDR034C-D BRX1Q08235 291 aaKnown RBP2.54□□□□□ -2
YDR034C-DYDR034C-D FCY22Q12119 530 aa2.54□□□□□ -2
YDR034C-DYDR034C-D RFM1Q12192 310 aa2.54□□□□□ -2
YDR034C-DYDR034C-D YCR025CP25352 136 aa2.54□□□□□ -2
YDR034C-DYDR034C-D UBP5P39944 805 aa2.54□□□□□ -2
YDR034C-DYDR034C-D COG3P40094 801 aa2.54□□□□□ -2
YDR034C-DYDR034C-D AIM23P47015 356 aa2.54□□□□□ -2
YDR034C-DYDR034C-D YOR376WQ08900 122 aa2.54□□□□□ -2
YDR034C-DYDR034C-D TIR4Q12218 487 aaPredicted RBP2.54□□□□□ -2
YDR034C-DYDR034C-D NMT1P14743 455 aa2.53□□□□□ -2
YDR034C-DYDR034C-D CDC10P25342 322 aaKnown RBP2.53□□□□□ -2
YDR034C-DYDR034C-D PMU1P36069 295 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YND1P40009 630 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YJR085CP47131 105 aaKnown RBP2.53□□□□□ -2
YDR034C-DYDR034C-D USE1P53146 245 aa2.53□□□□□ -2
YDR034C-DYDR034C-D ARC18Q05933 178 aaKnown RBP2.53□□□□□ -2
YDR034C-DYDR034C-D ZEO1Q08245 113 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YKR041WP36134 250 aa2.53□□□□□ -2
YDR034C-DYDR034C-D PCI8P40512 444 aa2.53□□□□□ -2
YDR034C-DYDR034C-D SNO3P43544 222 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YJR012CP47087 207 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YGL159WP53110 370 aa2.53□□□□□ -2
YDR034C-DYDR034C-D SPC24Q04477 213 aa2.53□□□□□ -2
YDR034C-DYDR034C-D YAL064W-BO13512 126 aa2.53□□□□□ -2
YDR034C-DYDR034C-D RPL16AP26784 199 aaKnown RBP2.53□□□□□ -2
YDR034C-DYDR034C-D AME1P38313 324 aa2.53□□□□□ -2
YDR034C-DYDR034C-D RRP3P38712 501 aaKnown RBP2.53□□□□□ -2
YDR034C-DYDR034C-D PRM6Q04705 352 aa2.53□□□□□ -2
YDR034C-DYDR034C-D GPM2Q12008 311 aa2.53□□□□□ -2
YDR034C-DYDR034C-D BCY1P07278 416 aaKnown RBP2.53□□□□□ -2.01
YDR034C-DYDR034C-D CBS2P14905 389 aa2.53□□□□□ -2.01
YDR034C-DYDR034C-D YAP3P38749 330 aa2.53□□□□□ -2.01
YDR034C-DYDR034C-D TRM9P49957 279 aa2.53□□□□□ -2.01
YDR034C-DYDR034C-D MRS2Q01926 470 aa2.53□□□□□ -2.01
YDR034C-DYDR034C-D YPL199CQ08954 240 aa2.53□□□□□ -2.01
YDR034C-DYDR034C-D GIT1P25346 518 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YNK1P36010 153 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D SEI1Q06058 285 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D CTR3Q06686 241 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YPR091CQ06833 770 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YNG1Q08465 219 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YDL109CQ12103 647 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D STH1P32597 1359 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D COS2P0CX12 379 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D COS3P0CX13 379 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D RPS8AP0CX39 200 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D RPS8BP0CX40 200 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D COS4P43542 379 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D IBD2P53892 351 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D DPP1Q05521 289 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D PEX10Q05568 337 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D TPO4Q12256 659 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D HIS3P06633 220 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D ASP3-2P0CX77 362 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D ASP3-3P0CX78 362 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D ASP3-4P0CX79 362 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D ASP3-1P0CZ17 362 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D DBP7P36120 742 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D SUR2P38992 349 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D UFE1P41834 346 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D SLX9P53251 210 aaPredicted RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D SNO1Q03144 224 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D COA4Q05809 96 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D DSE3Q08729 430 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D AI5_BETAQ9ZZX0 354 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YAK1P14680 807 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D AST1P35183 429 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YCR087C-AP37263 153 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D DFG10P40526 253 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D DIM1P41819 318 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D MCM22P47167 239 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YGL034CP53186 121 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D IMP4P53941 290 aaKnown RBP2.52□□□□□ -2.01
YDR034C-DYDR034C-D YLR460CP54007 376 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D YLR152CP54072 576 aa2.52□□□□□ -2.01
YDR034C-DYDR034C-D RPL20AP0CX23 172 aaKnown RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D RPL20BP0CX24 172 aaPredicted RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D CTA1P15202 515 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D CDC13P32797 924 aaKnown RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D MOG1P47123 218 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D NSA1P53136 463 aaPredicted RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D YML108WQ03759 105 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D ESA1Q08649 445 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D FBA1P14540 359 aaKnown RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D UBC8P28263 218 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D IRC18P47056 224 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D SPC2Q04969 178 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D ATP16Q12165 160 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D JLP1Q12358 412 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D TRP1P00912 224 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D YOL163WP0CF20 169 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D DBF2P22204 572 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D IDH1P28834 360 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YDR034C-DYDR034C-D LHP1P33399 275 aaKnown RBP2.51□□□□□ -2.01
YDR034C-DYDR034C-D PAN6P40459 309 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D NUP57P48837 541 aa2.51□□□□□ -2.01
YDR034C-DYDR034C-D ASI3P53983 676 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms