RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	CUE1	P38428	203 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	GAT2	P40209	560 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	MOB1	P40484	314 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	MEP2	P41948	499 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	MIC19	P43594	170 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	RPA43	P46669	326 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	CTH1	P47976	325 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	TIS11	P47977	285 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	NUP57	P48837	541 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	SLG1	P54867	378 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	YPL034W	Q03083	165 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	CGI121	Q03705	181 aa	Known RBP	4.54	□□□□□ -1.68
SNF3	YDL194W	FMN1	Q03778	218 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	TRM12	Q04235	462 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	SUE1	Q06524	206 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	FRE7	Q12333	620 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	YLR099W-A	Q3E798	87 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	VMA5	P31412	392 aa	Known RBP	4.54	□□□□□ -1.68
SNF3	YDL194W	KRE29	P40026	464 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	RPL10	P41805	221 aa	Known RBP	4.54	□□□□□ -1.68
SNF3	YDL194W	COS12	P53053	380 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	MKC7	P53379	596 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	DAD3	P69850	94 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	LGE1	Q02796	332 aa	Known RBP	4.54	□□□□□ -1.68
SNF3	YDL194W	MAK3	Q03503	176 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	CAC2	Q04199	468 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	VBA1	Q04301	562 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	YSP2	Q06681	1438 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	LCB4	Q12246	624 aa		4.54	□□□□□ -1.68
SNF3	YDL194W	HRP1	Q99383	534 aa	Known RBP	4.54	□□□□□ -1.68
SNF3	YDL194W	KRE5	P22023	1365 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	SNF5	P18480	905 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SNF3	YDL194W	POP5	P28005	173 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	PRY2	P36110	329 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	YGP1	P38616	354 aa	Known RBP	4.53	□□□□□ -1.68
SNF3	YDL194W	SSN3	P39073	555 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	AST2	P39945	430 aa	Known RBP	4.53	□□□□□ -1.68
SNF3	YDL194W	FAR3	P46671	204 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	OST3	P48439	350 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	HST3	P53687	447 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	YKR011C	Q02209	353 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	ECI1	Q05871	280 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	ECM3	Q99252	613 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	SAS5	Q99314	248 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	TKL1	P23254	680 aa	Known RBP	4.53	□□□□□ -1.68
SNF3	YDL194W	FRE2	P36033	711 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	PAN3	P36102	679 aa	Predicted RBP	4.53	□□□□□ -1.68
SNF3	YDL194W	YAL037W	P39728	267 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	SMB1	P40018	196 aa	Known RBP	4.53	□□□□□ -1.68
SNF3	YDL194W	AZF1	P41696	914 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	TAD2	P47058	250 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	USE1	P53146	245 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	SWC4	P53201	476 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	MAL13	P53338	473 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	YCL001W-A	P87012	153 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	CDC14	Q00684	551 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	CNL1	Q06333	122 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	MCH1	Q07376	486 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	YGL194C-A	Q2V2P6	80 aa		4.53	□□□□□ -1.68
SNF3	YDL194W	AMD1	P15274	810 aa	Known RBP	4.52	□□□□□ -1.69
SNF3	YDL194W	ERD1	P16151	362 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	MXR2	P25566	168 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	MET30	P39014	640 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	MID1	P41821	548 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	FRE4	P53746	719 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	KTR5	P53966	522 aa	Predicted RBP	4.52	□□□□□ -1.69
SNF3	YDL194W	TVP18	Q04767	167 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	YCT1	Q12235	531 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	RNH203	Q12338	110 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	GTT2	Q12390	233 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	ESP1	Q03018	1630 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	PEX4	P29340	183 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	CEM1	P39525	442 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	YPS6	P40583	537 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	RPS10B	P46784	105 aa	Known RBP	4.52	□□□□□ -1.69
SNF3	YDL194W	SMX3	P54999	86 aa	Predicted RBP	4.52	□□□□□ -1.69
SNF3	YDL194W	HSK3	P69852	69 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	RAV2	Q03956	351 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	COQ9	Q05779	260 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	YLR177W	Q06251	628 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	CTR3	Q06686	241 aa		4.52	□□□□□ -1.69
SNF3	YDL194W	MYO2	P19524	1574 aa	Known RBP	4.52	□□□□□ -1.69
SNF3	YDL194W	VAR1	P02381	398 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	BCY1	P07278	416 aa	Known RBP	4.51	□□□□□ -1.69
SNF3	YDL194W	TAH1	P25638	111 aa	Predicted RBP	4.51	□□□□□ -1.69
SNF3	YDL194W	MRPL3	P36516	390 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	INM1	P38710	295 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	DOG2	P38773	246 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	GLR1	P41921	483 aa	Known RBP	4.51	□□□□□ -1.69
SNF3	YDL194W	ASN1	P49089	572 aa	Known RBP	4.51	□□□□□ -1.69
SNF3	YDL194W	ERG5	P54781	538 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	YDR209C	Q03480	137 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	GEP5	Q12393	293 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	YPR015C	Q12531	247 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	TPK3	P05986	398 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	RAD10	P06838	210 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	SCM4	P32564	187 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	SFK1	P35735	353 aa		4.51	□□□□□ -1.69
SNF3	YDL194W	MRPL28	P36527	147 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms